Strain Fitness in Erwinia amylovora T8 around OLJFJH_12215

Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-8
2,572,447	+		OLJFJH_12210	0.38	-0.0
2,572,481	+		OLJFJH_12210	0.41	-0.4
2,572,541	-		OLJFJH_12210	0.46	+0.4
2,573,104	-				+0.7
2,573,112	-				+0.3
2,573,164	+				-1.1
2,573,165	-				-0.3
2,573,207	+				-0.1
2,573,207	+				-0.5
2,573,208	-				-0.0
2,573,208	-				+0.1
2,573,238	-				+0.2
2,573,308	-				+1.3
2,573,513	+		OLJFJH_12215	0.54	-1.9
2,573,583	+		OLJFJH_12215	0.75	+0.1
2,573,583	+		OLJFJH_12215	0.75	-2.6
2,573,583	+		OLJFJH_12215	0.75	+0.8
2,573,584	-		OLJFJH_12215	0.75	-1.4
2,573,584	-		OLJFJH_12215	0.75	-1.3
2,573,584	-		OLJFJH_12215	0.75	-1.0
2,573,584	-		OLJFJH_12215	0.75	+0.6
2,573,630	+		OLJFJH_12215	0.89	-0.9
2,573,683	+				+1.9
2,573,783	+				-0.2
2,573,783	+				+1.0
2,573,785	+				+0.2
2,573,786	-				-2.8
2,573,804	-				-0.3
2,574,130	+		OLJFJH_12220	0.15	+0.1
2,574,131	-		OLJFJH_12220	0.15	-0.2
2,574,134	-		OLJFJH_12220	0.15	+0.8
2,574,193	+		OLJFJH_12220	0.20	-0.1
2,574,295	+		OLJFJH_12220	0.27	-0.2
2,574,453	+		OLJFJH_12220	0.37	-1.0
2,574,516	-		OLJFJH_12220	0.42	+1.1
2,574,581	+		OLJFJH_12220	0.46	-1.6
2,574,605	+		OLJFJH_12220	0.48	-0.2
2,574,606	-		OLJFJH_12220	0.48	-2.4