Strain Fitness in Erwinia amylovora T8 around OLJFJH_12040

Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-8
2,532,081	+		OLJFJH_12035	0.58	-1.9
2,532,082	-		OLJFJH_12035	0.58	-3.0
2,532,083	+		OLJFJH_12035	0.58	-0.4
2,532,240	+		OLJFJH_12035	0.66	-1.5
2,532,241	-		OLJFJH_12035	0.66	-0.6
2,532,435	+		OLJFJH_12035	0.75	-0.7
2,532,435	+		OLJFJH_12035	0.75	+0.5
2,532,436	-		OLJFJH_12035	0.75	-0.2
2,532,744	+		OLJFJH_12035	0.89	-1.4
2,532,868	-				-1.6
2,532,918	+				-0.4
2,532,935	-				-0.8
2,532,952	+				+0.6
2,532,952	+				-1.7
2,532,962	-				-1.8
2,533,065	+				-1.4
2,533,115	-				-2.4
2,533,116	-				-0.7
2,533,272	+		OLJFJH_12040	0.21	-3.1
2,533,344	-		OLJFJH_12040	0.29	-1.0
2,533,344	-		OLJFJH_12040	0.29	-1.9
2,533,389	+		OLJFJH_12040	0.34	-0.2
2,533,389	+		OLJFJH_12040	0.34	-1.7
2,533,390	-		OLJFJH_12040	0.34	-2.4
2,533,390	-		OLJFJH_12040	0.34	-2.7
2,533,398	-		OLJFJH_12040	0.35	-1.4
2,533,452	-		OLJFJH_12040	0.41	-3.3
2,533,626	-		OLJFJH_12040	0.60	-4.4
2,533,650	+		OLJFJH_12040	0.63	-0.5
2,533,712	+		OLJFJH_12040	0.70	-3.0
2,533,713	-		OLJFJH_12040	0.70	-1.7
2,533,818	-		OLJFJH_12040	0.82	-1.8
2,533,819	+		OLJFJH_12040	0.82	-0.9
2,533,852	+		OLJFJH_12040	0.85	-3.3
2,534,015	-				-0.6
2,534,139	+		OLJFJH_12045	0.11	-0.3
2,534,670	+		OLJFJH_12045	0.58	-0.6
2,534,675	-		OLJFJH_12045	0.59	-1.8
2,534,747	+		OLJFJH_12045	0.65	-0.8
2,534,834	+		OLJFJH_12045	0.73	-2.7