Strain Fitness in Erwinia amylovora T8 around OLJFJH_10500

Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-8
2,167,575	-		OLJFJH_10495	0.40	+0.3
2,167,575	-		OLJFJH_10495	0.40	+0.4
2,167,881	+		OLJFJH_10495	0.63	+2.3
2,167,882	-		OLJFJH_10495	0.63	-0.7
2,167,882	-		OLJFJH_10495	0.63	-1.5
2,167,925	+		OLJFJH_10495	0.66	+0.4
2,167,926	-		OLJFJH_10495	0.66	+1.5
2,168,002	+		OLJFJH_10495	0.71	-0.6
2,168,131	-		OLJFJH_10495	0.81	+0.2
2,168,253	+		OLJFJH_10495	0.90	-0.8
2,168,285	-				+0.1
2,168,306	+				-1.1
2,168,306	+				-0.5
2,168,306	+				-0.8
2,168,306	+				-1.9
2,168,372	-				-0.8
2,168,441	+				+1.1
2,168,471	+				-0.6
2,168,472	-				+0.4
2,168,479	+				-0.7
2,168,479	+				-0.3
2,168,479	+				-1.7
2,168,508	+				-1.2
2,168,508	+				-1.8
2,168,509	-				-0.9
2,168,529	+				-0.5
2,168,560	-				-1.2
2,168,570	+				-0.4
2,168,670	+				+0.2
2,168,694	+				-2.4
2,168,694	+				-2.5
2,168,694	+				-1.8
2,168,695	-				-0.6
2,168,695	-				-1.5
2,168,791	-		OLJFJH_10500	0.15	-2.0
2,168,791	-		OLJFJH_10500	0.15	-0.1
2,168,962	-		OLJFJH_10500	0.27	-0.8
2,168,964	+		OLJFJH_10500	0.27	-3.6
2,168,964	+		OLJFJH_10500	0.27	-0.1
2,168,965	-		OLJFJH_10500	0.27	-1.7
2,169,184	-		OLJFJH_10500	0.42	-1.7
2,169,296	+		OLJFJH_10500	0.50	-0.9
2,169,297	-		OLJFJH_10500	0.50	-1.7
2,169,364	-		OLJFJH_10500	0.54	-1.2
2,169,364	-		OLJFJH_10500	0.54	-0.4
2,169,368	-		OLJFJH_10500	0.55	-1.8
2,169,709	+		OLJFJH_10500	0.78	+3.8
2,169,709	+		OLJFJH_10500	0.78	-1.1
2,169,710	-		OLJFJH_10500	0.78	-0.1
2,169,710	-		OLJFJH_10500	0.78	-3.3
2,169,769	+		OLJFJH_10500	0.82	-1.9
2,169,769	+		OLJFJH_10500	0.82	-0.3
2,169,832	+		OLJFJH_10500	0.86	-3.3
2,169,832	+		OLJFJH_10500	0.86	-0.8
2,169,833	-		OLJFJH_10500	0.86	-1.2
2,169,909	+				-2.4
2,169,999	+				+1.4
2,169,999	+				-0.4
2,170,086	+				+0.2