Strain Fitness in Erwinia amylovora T8 around OLJFJH_07000

Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-8
1,424,994	+		OLJFJH_06990	0.82	-2.8
1,424,994	+		OLJFJH_06990	0.82	+5.1
1,425,100	+		OLJFJH_06990	0.89	-1.9
1,425,230	+				-0.1
1,425,231	-				-0.7
1,425,362	+				+0.8
1,425,362	+				-0.5
1,425,464	-		OLJFJH_06995	0.26	-1.5
1,425,464	-		OLJFJH_06995	0.26	-0.5
1,425,540	-		OLJFJH_06995	0.45	-0.6
1,425,564	+		OLJFJH_06995	0.51	-1.7
1,425,618	-		OLJFJH_06995	0.64	-1.3
1,425,718	-		OLJFJH_06995	0.89	-1.0
1,425,718	-		OLJFJH_06995	0.89	-0.7
1,425,759	+				+1.6
1,425,760	-				-2.0
1,425,763	-				-0.5
1,425,805	+				-1.5
1,425,806	-				+0.4
1,425,806	-				-0.8
1,425,806	-				+0.2
1,425,806	-				+0.1
1,425,806	-				+0.5
1,425,818	-				-1.9
1,425,818	-				+0.6
1,425,863	+				+1.3
1,425,868	+				+1.1
1,425,868	+				-0.5
1,425,868	+				-0.6
1,425,868	+				-1.0
1,425,869	-				+0.5
1,425,869	-				+0.4
1,425,926	-				-1.5
1,425,961	-				-0.4
1,425,962	+				-3.5
1,425,963	-				-1.3
1,426,005	+				-3.2
1,426,036	+				-1.4
1,426,037	-				+0.3
1,426,040	+				-1.0
1,426,160	+		OLJFJH_07000	0.20	-1.3
1,426,160	+		OLJFJH_07000	0.20	-0.7
1,426,160	+		OLJFJH_07000	0.20	-1.0
1,426,160	+		OLJFJH_07000	0.20	-1.9
1,426,161	-		OLJFJH_07000	0.20	-1.6
1,426,161	-		OLJFJH_07000	0.20	-0.4
1,426,161	-		OLJFJH_07000	0.20	-2.1
1,426,161	-		OLJFJH_07000	0.20	+0.1
1,426,162	+		OLJFJH_07000	0.20	-2.7
1,426,162	+		OLJFJH_07000	0.20	-0.1
1,426,162	+		OLJFJH_07000	0.20	-1.4
1,426,162	+		OLJFJH_07000	0.20	-0.8
1,426,162	+		OLJFJH_07000	0.20	-0.9
1,426,162	+		OLJFJH_07000	0.20	-2.3
1,426,162	+		OLJFJH_07000	0.20	-2.1
1,426,162	+		OLJFJH_07000	0.20	-0.1
1,426,162	+		OLJFJH_07000	0.20	-0.2
1,426,163	-		OLJFJH_07000	0.20	-2.6
1,426,163	-		OLJFJH_07000	0.20	-0.5
1,426,163	-		OLJFJH_07000	0.20	-0.2
1,426,163	-		OLJFJH_07000	0.20	-1.5
1,426,163	-		OLJFJH_07000	0.20	+0.3
1,426,205	-		OLJFJH_07000	0.24	-1.4
1,426,262	-		OLJFJH_07000	0.29	-1.1
1,426,262	-		OLJFJH_07000	0.29	+0.1
1,426,262	-		OLJFJH_07000	0.29	-1.0
1,426,441	+		OLJFJH_07000	0.45	-1.0
1,426,486	+		OLJFJH_07000	0.49	+1.1
1,426,799	+		OLJFJH_07000	0.77	-1.0
1,426,800	-		OLJFJH_07000	0.77	-2.5
1,426,800	-		OLJFJH_07000	0.77	-1.7
1,426,801	+		OLJFJH_07000	0.77	+0.6
1,426,830	+		OLJFJH_07000	0.79	+1.8
1,426,830	+		OLJFJH_07000	0.79	-2.5
1,426,830	+		OLJFJH_07000	0.79	-1.0
1,426,830	+		OLJFJH_07000	0.79	-0.4
1,426,830	+		OLJFJH_07000	0.79	-0.2
1,426,830	+		OLJFJH_07000	0.79	-2.0
1,426,830	+		OLJFJH_07000	0.79	-0.6
1,426,831	-		OLJFJH_07000	0.79	+1.7
1,426,831	-		OLJFJH_07000	0.79	-2.0
1,426,831	-		OLJFJH_07000	0.79	+0.5
1,426,831	-		OLJFJH_07000	0.79	-1.4
1,426,831	-		OLJFJH_07000	0.79	+1.5
1,426,831	-		OLJFJH_07000	0.79	-2.4
1,426,831	-		OLJFJH_07000	0.79	-2.0
1,426,925	-		OLJFJH_07000	0.88	+0.0
1,426,964	+				+0.0
1,426,964	+				-1.7