Strain Fitness in Erwinia amylovora T8 around OLJFJH_06105

Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-8
1,230,083	-		OLJFJH_06100	0.71	+1.9
1,230,114	-		OLJFJH_06100	0.72	-0.2
1,230,161	+		OLJFJH_06100	0.74	-0.9
1,230,161	+		OLJFJH_06100	0.74	-0.4
1,230,161	+		OLJFJH_06100	0.74	+5.3
1,230,162	-		OLJFJH_06100	0.74	+1.0
1,230,199	+		OLJFJH_06100	0.75	-1.2
1,230,245	-		OLJFJH_06100	0.77	-2.1
1,230,245	-		OLJFJH_06100	0.77	-0.4
1,230,282	+		OLJFJH_06100	0.79	+0.4
1,230,706	+				+0.4
1,230,797	+				-2.9
1,230,797	+				+0.8
1,230,798	-				-0.9
1,230,798	-				-1.2
1,230,801	-				+0.4
1,230,801	-				-0.6
1,230,809	-				-2.0
1,230,827	-				-0.1
1,230,836	+				-1.5
1,230,837	-				+0.1
1,230,900	-				+3.1
1,230,957	+				-0.9
1,230,957	+				+1.1
1,230,958	-				-1.1
1,230,958	-				-1.5
1,230,958	-				-1.3
1,230,972	+				-0.9
1,231,268	+		OLJFJH_06105	0.24	-2.2
1,231,268	+		OLJFJH_06105	0.24	-2.6
1,231,269	-		OLJFJH_06105	0.24	-2.5
1,231,272	-		OLJFJH_06105	0.24	-2.1
1,231,281	-		OLJFJH_06105	0.25	-0.4
1,231,281	-		OLJFJH_06105	0.25	-2.8
1,231,281	-		OLJFJH_06105	0.25	-0.2
1,231,348	+		OLJFJH_06105	0.33	-1.3
1,231,348	+		OLJFJH_06105	0.33	-2.5
1,231,349	-		OLJFJH_06105	0.33	-0.9
1,231,352	+		OLJFJH_06105	0.33	-1.8
1,231,353	-		OLJFJH_06105	0.33	-2.8
1,231,353	-		OLJFJH_06105	0.33	-2.3
1,231,382	+		OLJFJH_06105	0.36	-0.6
1,231,382	+		OLJFJH_06105	0.36	-3.2
1,231,491	-		OLJFJH_06105	0.48	-2.3
1,231,559	+		OLJFJH_06105	0.56	-1.7
1,231,559	+		OLJFJH_06105	0.56	-0.2
1,231,560	-		OLJFJH_06105	0.56	-1.2
1,231,565	+		OLJFJH_06105	0.57	-1.9
1,231,566	-		OLJFJH_06105	0.57	-1.2
1,231,566	-		OLJFJH_06105	0.57	-1.4
1,231,566	-		OLJFJH_06105	0.57	-1.0
1,231,566	-		OLJFJH_06105	0.57	-3.8
1,231,593	-		OLJFJH_06105	0.60	-2.1
1,231,624	-		OLJFJH_06105	0.63	-0.7
1,231,728	-		OLJFJH_06105	0.75	-1.0
1,231,878	-				-1.7
1,231,897	+				-2.1
1,231,897	+				-1.8
1,231,898	-				+0.1
1,231,898	-				-2.2
1,231,898	-				-2.3
1,231,902	+				-0.8
1,231,902	+				-0.5
1,231,902	+				-1.9
1,231,902	+				+0.4
1,231,903	-				-1.9
1,231,916	+				-2.0
1,231,916	+				-1.9
1,231,917	-				-2.5
1,231,917	-				-2.1
1,232,011	-				-0.0
1,232,022	+				-0.8
1,232,022	+				+0.8
1,232,022	+				+0.1
1,232,022	+				+3.5
1,232,022	+				+1.6
1,232,023	-				+2.3
1,232,023	-				-0.9
1,232,026	-				-1.5
1,232,080	+				+0.4
1,232,082	+				+3.3
1,232,083	-				-2.1
1,232,083	-				-0.5
1,232,125	-				+0.5
1,232,125	-				+0.1
1,232,125	-				-0.1
1,232,133	+				-0.2
1,232,133	+				-0.3
1,232,133	+				-0.9
1,232,287	+				-1.1
1,232,287	+				-0.5
1,232,287	+				-0.4
1,232,378	+				+0.2
1,232,404	+				+0.7
1,232,405	-				-1.3
1,232,508	-				-0.7
1,232,508	-				+0.1
1,232,556	+		OLJFJH_06110	0.12	+0.8
1,232,559	+		OLJFJH_06110	0.12	-1.8
1,232,559	+		OLJFJH_06110	0.12	-0.1
1,232,765	+		OLJFJH_06110	0.19	+0.1
1,232,859	+		OLJFJH_06110	0.23	+1.0
1,232,860	-		OLJFJH_06110	0.23	-0.4
1,232,889	+		OLJFJH_06110	0.24	+0.7
1,232,898	+		OLJFJH_06110	0.24	-1.5
1,232,898	+		OLJFJH_06110	0.24	-0.5
1,232,899	-		OLJFJH_06110	0.25	-0.8
1,232,933	-		OLJFJH_06110	0.26	-1.3