Strain Fitness in Erwinia amylovora T8 around OLJFJH_05770

Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-8
1,167,140	-				-0.9
1,167,145	+				+0.8
1,167,145	+				+1.3
1,167,146	-				+0.1
1,167,230	+				+1.0
1,167,230	+				+1.4
1,167,231	-				+1.6
1,167,231	-				+2.6
1,167,231	-				-0.2
1,167,235	+				-0.3
1,167,286	-				+0.1
1,167,310	+				-0.8
1,167,310	+				-0.4
1,167,311	-				-0.4
1,167,311	-				-1.2
1,167,311	-				+1.0
1,167,311	-				-1.5
1,167,311	-				-1.6
1,167,311	-				-1.3
1,167,420	+		OLJFJH_05765	0.15	+0.8
1,167,421	-		OLJFJH_05765	0.15	-1.1
1,167,421	-		OLJFJH_05765	0.15	-1.3
1,167,839	+		OLJFJH_05765	0.74	-2.5
1,167,839	+		OLJFJH_05765	0.74	-1.5
1,167,989	-				+0.5
1,167,989	-				+0.2
1,168,179	+		OLJFJH_05770	0.15	-0.5
1,168,180	-		OLJFJH_05770	0.15	-3.5
1,168,296	+		OLJFJH_05770	0.33	-0.6
1,168,500	-		OLJFJH_05770	0.65	-0.5
1,168,650	+		OLJFJH_05770	0.88	+0.1
1,168,650	+		OLJFJH_05770	0.88	-1.3
1,168,650	+		OLJFJH_05770	0.88	-0.7
1,168,804	+				+2.8
1,168,805	-				+0.1
1,169,073	+		OLJFJH_05775	0.46	-0.7
1,169,074	-		OLJFJH_05775	0.46	-2.6
1,169,301	+		OLJFJH_05775	0.84	+0.4
1,169,301	+		OLJFJH_05775	0.84	+0.3
1,169,301	+		OLJFJH_05775	0.84	-1.9
1,169,301	+		OLJFJH_05775	0.84	+0.9
1,169,423	+				-0.2
1,169,423	+				+1.6
1,169,424	-				+1.4
1,169,509	+				+0.1