Strain Fitness in Erwinia amylovora T8 around OLJFJH_05550

Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-8
1,129,358	-		OLJFJH_05545	0.45	+0.0
1,129,361	+		OLJFJH_05545	0.45	-0.8
1,129,361	+		OLJFJH_05545	0.45	+1.1
1,129,362	-		OLJFJH_05545	0.45	+0.5
1,129,362	-		OLJFJH_05545	0.45	-0.5
1,129,362	-		OLJFJH_05545	0.45	-0.5
1,129,384	+		OLJFJH_05545	0.47	+1.4
1,129,490	-		OLJFJH_05545	0.55	-0.7
1,129,492	+		OLJFJH_05545	0.55	+0.3
1,129,492	+		OLJFJH_05545	0.55	+0.3
1,129,493	-		OLJFJH_05545	0.55	-0.0
1,129,493	-		OLJFJH_05545	0.55	+0.3
1,129,493	-		OLJFJH_05545	0.55	-0.6
1,129,493	-		OLJFJH_05545	0.55	-0.2
1,129,651	+		OLJFJH_05545	0.66	-1.4
1,129,652	-		OLJFJH_05545	0.66	-0.5
1,129,652	-		OLJFJH_05545	0.66	-0.2
1,129,805	-		OLJFJH_05545	0.77	-1.5
1,129,858	+		OLJFJH_05545	0.81	-0.1
1,129,858	+		OLJFJH_05545	0.81	+0.5
1,129,858	+		OLJFJH_05545	0.81	+0.6
1,129,859	-		OLJFJH_05545	0.81	-0.3
1,129,859	-		OLJFJH_05545	0.81	+2.5
1,129,859	-		OLJFJH_05545	0.81	+0.1
1,129,951	+		OLJFJH_05545	0.88	+0.7
1,129,951	+		OLJFJH_05545	0.88	-0.7
1,129,951	+		OLJFJH_05545	0.88	+0.6
1,129,951	+		OLJFJH_05545	0.88	-0.9
1,129,952	-		OLJFJH_05545	0.88	-0.1
1,129,952	-		OLJFJH_05545	0.88	-0.3
1,129,952	-		OLJFJH_05545	0.88	-1.4
1,130,155	+				+1.7
1,130,156	-				+0.8
1,130,199	+				+0.9
1,130,200	-				-0.5
1,130,200	-				+0.1
1,130,359	+				-0.8
1,130,360	-				-0.3
1,130,369	+				+1.6
1,130,369	+				+0.3
1,130,369	+				+0.0
1,130,369	+				+0.3
1,130,370	-				+0.1
1,130,579	+		OLJFJH_05550	0.11	-2.9
1,130,580	-		OLJFJH_05550	0.11	-0.4
1,130,647	+		OLJFJH_05550	0.14	-1.3
1,130,647	+		OLJFJH_05550	0.14	+0.8
1,130,969	+		OLJFJH_05550	0.29	-1.4
1,130,969	+		OLJFJH_05550	0.29	-1.3
1,130,969	+		OLJFJH_05550	0.29	-0.5
1,130,970	-		OLJFJH_05550	0.29	-2.1
1,130,980	+		OLJFJH_05550	0.30	-0.9
1,131,164	+		OLJFJH_05550	0.39	-3.1
1,131,282	+		OLJFJH_05550	0.44	-0.9
1,131,283	-		OLJFJH_05550	0.44	-1.3
1,131,435	-		OLJFJH_05550	0.52	-2.4
1,131,507	+		OLJFJH_05550	0.55	-0.4
1,131,537	-		OLJFJH_05550	0.57	-1.3
1,131,670	-		OLJFJH_05550	0.63	-0.7
1,131,670	-		OLJFJH_05550	0.63	+0.3
1,131,966	+		OLJFJH_05550	0.77	-0.7
1,131,986	-		OLJFJH_05550	0.78	-1.3
1,131,986	-		OLJFJH_05550	0.78	-1.4
1,131,986	-		OLJFJH_05550	0.78	-1.4
1,131,986	-		OLJFJH_05550	0.78	-0.2
1,132,022	+		OLJFJH_05550	0.80	+0.1
1,132,022	+		OLJFJH_05550	0.80	-2.5
1,132,023	-		OLJFJH_05550	0.80	-0.8
1,132,186	-		OLJFJH_05550	0.88	-1.9
1,132,186	-		OLJFJH_05550	0.88	-1.5
1,132,258	+				-1.1
1,132,258	+				-2.5
1,132,258	+				-0.6
1,132,259	-				+0.8
1,132,289	-				-0.4
1,132,407	-				+0.2
1,132,440	+				+0.7
1,132,440	+				-1.4
1,132,441	-				-1.5
1,132,441	-				-3.2
1,132,444	+				-2.3
1,132,444	+				-0.7
1,132,445	-				-1.0
1,132,454	-				+0.1
1,132,454	-				-2.4
1,132,621	+		OLJFJH_05555	0.26	-0.8
1,132,621	+		OLJFJH_05555	0.26	-0.7
1,132,622	-		OLJFJH_05555	0.26	-1.9
1,132,623	+		OLJFJH_05555	0.26	-1.9
1,132,623	+		OLJFJH_05555	0.26	+1.2
1,132,623	+		OLJFJH_05555	0.26	+0.3
1,132,623	+		OLJFJH_05555	0.26	-3.0
1,132,623	+		OLJFJH_05555	0.26	-2.2
1,132,623	+		OLJFJH_05555	0.26	-1.6
1,132,623	+		OLJFJH_05555	0.26	-1.7
1,132,623	+		OLJFJH_05555	0.26	-0.2
1,132,623	+		OLJFJH_05555	0.26	-1.5
1,132,623	+		OLJFJH_05555	0.26	-1.0
1,132,623	+		OLJFJH_05555	0.26	+0.9
1,132,623	+		OLJFJH_05555	0.26	-1.2
1,132,623	+		OLJFJH_05555	0.26	-1.4
1,132,623	+		OLJFJH_05555	0.26	+0.5
1,132,623	+		OLJFJH_05555	0.26	-0.0
1,132,623	+		OLJFJH_05555	0.26	-1.6
1,132,623	+		OLJFJH_05555	0.26	-1.0
1,132,623	+		OLJFJH_05555	0.26	-1.4
1,132,624	-		OLJFJH_05555	0.27	-0.2
1,132,624	-		OLJFJH_05555	0.27	-1.5
1,132,624	-		OLJFJH_05555	0.27	+0.1
1,132,624	-		OLJFJH_05555	0.27	-0.0
1,132,624	-		OLJFJH_05555	0.27	+0.7
1,132,624	-		OLJFJH_05555	0.27	+1.4
1,132,624	-		OLJFJH_05555	0.27	+0.8
1,132,624	-		OLJFJH_05555	0.27	-0.1
1,132,624	-		OLJFJH_05555	0.27	-0.5
1,132,624	-		OLJFJH_05555	0.27	+0.3
1,132,659	+		OLJFJH_05555	0.32	+0.3
1,132,659	+		OLJFJH_05555	0.32	-0.6
1,132,723	+		OLJFJH_05555	0.41	-0.3
1,132,723	+		OLJFJH_05555	0.41	+1.5
1,132,724	-		OLJFJH_05555	0.41	+0.8
1,132,724	-		OLJFJH_05555	0.41	-0.4
1,133,054	+		OLJFJH_05555	0.88	+0.3
1,133,055	-		OLJFJH_05555	0.89	+0.8
1,133,119	-				+0.4
1,133,150	+				-1.8
1,133,223	+				-0.3
1,133,230	+				-0.3
1,133,289	-				-0.2
1,133,378	+				-0.5
1,133,381	+				-0.2
1,133,382	-				-3.0