Strain Fitness in Erwinia amylovora T8 around OLJFJH_05470

Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-8
1,108,884	+		OLJFJH_05465	0.13	-1.5
1,108,884	+		OLJFJH_05465	0.13	-0.5
1,108,884	+		OLJFJH_05465	0.13	-0.3
1,108,884	+		OLJFJH_05465	0.13	-3.0
1,108,959	+		OLJFJH_05465	0.25	-2.1
1,109,035	-		OLJFJH_05465	0.37	-0.6
1,109,061	-		OLJFJH_05465	0.41	-1.8
1,109,183	-		OLJFJH_05465	0.60	-1.2
1,109,213	+		OLJFJH_05465	0.65	-0.7
1,109,243	+		OLJFJH_05465	0.70	-1.5
1,109,337	+		OLJFJH_05465	0.85	-1.0
1,109,337	+		OLJFJH_05465	0.85	-1.9
1,109,337	+		OLJFJH_05465	0.85	+0.0
1,109,337	+		OLJFJH_05465	0.85	-3.1
1,109,337	+		OLJFJH_05465	0.85	-2.4
1,109,338	-		OLJFJH_05465	0.85	+2.1
1,109,338	-		OLJFJH_05465	0.85	-1.9
1,109,339	+		OLJFJH_05465	0.85	-0.6
1,109,340	-		OLJFJH_05465	0.85	-0.9
1,109,340	-		OLJFJH_05465	0.85	+0.3
1,109,382	+				-0.9
1,109,382	+				-0.1
1,109,382	+				-2.4
1,109,382	+				-1.7
1,109,383	-				-0.1
1,109,383	-				-1.8
1,109,395	-				-1.2
1,109,399	+				-1.1
1,109,438	-				-0.3
1,109,481	+				-0.5
1,109,487	+				-0.2
1,109,487	+				-1.0
1,109,487	+				+2.0
1,109,487	+				+0.9
1,109,487	+				+0.5
1,109,488	-				+0.4
1,109,488	-				-1.0
1,109,488	-				+2.2
1,109,534	+				-1.0
1,109,563	+				+0.3
1,109,563	+				+0.8
1,109,564	-				+0.5
1,109,587	+				+0.1
1,109,587	+				-1.2
1,110,830	+		OLJFJH_05470	0.35	-1.3
1,110,830	+		OLJFJH_05470	0.35	-0.5
1,110,831	-		OLJFJH_05470	0.35	-0.5
1,110,831	-		OLJFJH_05470	0.35	-1.0
1,111,276	+		OLJFJH_05470	0.51	-0.3
1,111,408	+		OLJFJH_05470	0.56	-0.5
1,112,243	+		OLJFJH_05470	0.86	+0.7
1,112,283	-		OLJFJH_05470	0.87	-0.3
1,112,476	+				-1.1
1,112,499	+				-1.9
1,112,644	-				+0.1
1,112,644	-				+2.2
1,112,664	-				-1.7
1,112,744	+				+0.9
1,112,745	-				-0.3
1,112,745	-				+2.5
1,112,784	+				+3.3
1,112,805	-				-0.5
1,112,817	-				+0.4
1,112,817	-				+0.2
1,112,821	+				-0.7
1,112,827	-				+0.1
1,112,827	-				-0.6
1,112,850	-				-0.1
1,112,888	+				+0.5
1,112,888	+				-0.9
1,112,889	-				-1.1
1,112,889	-				+0.2
1,112,889	-				+0.2
1,112,889	-				-0.0
1,112,941	+				+0.3
1,112,968	+				+0.2
1,113,088	-				+1.0