Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-8
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_04985 and OLJFJH_04990 are separated by 97 nucleotides OLJFJH_04990 and OLJFJH_04995 are separated by 71 nucleotides OLJFJH_04995 and OLJFJH_05000 are separated by 73 nucleotides
OLJFJH_04985: OLJFJH_04985 - PTS mannitol transporter subunit IICBA, at 988,861 to 990,792
_04985
OLJFJH_04990: OLJFJH_04990 - mannitol-1-phosphate 5-dehydrogenase, at 990,890 to 992,038
_04990
OLJFJH_04995: OLJFJH_04995 - MltR family transcriptional regulator, at 992,110 to 992,655
_04995
OLJFJH_05000: OLJFJH_05000 - YibL family ribosome-associated protein, at 992,729 to 993,091
_05000
Position (kb) 990
991
992
993 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 990.018 kb on - strand, within OLJFJH_04985 at 990.222 kb on + strand, within OLJFJH_04985 at 990.222 kb on + strand, within OLJFJH_04985 at 990.244 kb on + strand, within OLJFJH_04985 at 990.244 kb on + strand, within OLJFJH_04985 at 990.244 kb on + strand, within OLJFJH_04985 at 990.336 kb on + strand, within OLJFJH_04985 at 990.337 kb on - strand, within OLJFJH_04985 at 990.375 kb on - strand, within OLJFJH_04985 at 990.375 kb on - strand, within OLJFJH_04985 at 990.506 kb on - strand, within OLJFJH_04985 at 990.542 kb on + strand, within OLJFJH_04985 at 990.542 kb on + strand, within OLJFJH_04985 at 990.542 kb on + strand, within OLJFJH_04985 at 990.542 kb on + strand, within OLJFJH_04985 at 990.543 kb on - strand, within OLJFJH_04985 at 990.549 kb on + strand, within OLJFJH_04985 at 990.550 kb on - strand, within OLJFJH_04985 at 990.550 kb on - strand, within OLJFJH_04985 at 990.672 kb on + strand at 990.672 kb on + strand at 990.672 kb on + strand at 990.672 kb on + strand at 990.672 kb on + strand at 990.673 kb on - strand at 990.673 kb on - strand at 990.673 kb on - strand at 990.749 kb on + strand at 990.749 kb on + strand at 990.749 kb on + strand at 990.777 kb on + strand at 990.790 kb on + strand at 990.855 kb on + strand at 990.856 kb on - strand at 990.885 kb on + strand at 990.997 kb on - strand at 991.108 kb on + strand, within OLJFJH_04990 at 991.290 kb on + strand, within OLJFJH_04990 at 991.522 kb on + strand, within OLJFJH_04990 at 991.612 kb on + strand, within OLJFJH_04990 at 991.707 kb on - strand, within OLJFJH_04990 at 991.856 kb on - strand, within OLJFJH_04990 at 992.026 kb on + strand at 992.120 kb on + strand at 992.180 kb on + strand, within OLJFJH_04995 at 992.250 kb on - strand, within OLJFJH_04995 at 992.259 kb on - strand, within OLJFJH_04995 at 992.275 kb on + strand, within OLJFJH_04995 at 992.287 kb on + strand, within OLJFJH_04995 at 992.295 kb on - strand, within OLJFJH_04995 at 992.351 kb on + strand, within OLJFJH_04995 at 992.373 kb on + strand, within OLJFJH_04995 at 992.386 kb on + strand, within OLJFJH_04995 at 992.386 kb on + strand, within OLJFJH_04995 at 992.553 kb on + strand, within OLJFJH_04995 at 992.629 kb on - strand at 992.658 kb on + strand at 992.659 kb on - strand at 992.742 kb on + strand at 992.863 kb on - strand, within OLJFJH_05000
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-8 remove 990,018 - OLJFJH_04985 0.60 +0.2 990,222 + OLJFJH_04985 0.70 -2.2 990,222 + OLJFJH_04985 0.70 -1.2 990,244 + OLJFJH_04985 0.72 -0.1 990,244 + OLJFJH_04985 0.72 -0.9 990,244 + OLJFJH_04985 0.72 +2.0 990,336 + OLJFJH_04985 0.76 +1.6 990,337 - OLJFJH_04985 0.76 +0.3 990,375 - OLJFJH_04985 0.78 -0.4 990,375 - OLJFJH_04985 0.78 -1.9 990,506 - OLJFJH_04985 0.85 +2.3 990,542 + OLJFJH_04985 0.87 -0.9 990,542 + OLJFJH_04985 0.87 +0.1 990,542 + OLJFJH_04985 0.87 -0.5 990,542 + OLJFJH_04985 0.87 +0.3 990,543 - OLJFJH_04985 0.87 +0.5 990,549 + OLJFJH_04985 0.87 -0.3 990,550 - OLJFJH_04985 0.87 -2.2 990,550 - OLJFJH_04985 0.87 +1.0 990,672 + -0.3 990,672 + +0.4 990,672 + -0.3 990,672 + -1.0 990,672 + -0.9 990,673 - -1.0 990,673 - +1.9 990,673 - +4.3 990,749 + -0.4 990,749 + -0.5 990,749 + -0.3 990,777 + -0.3 990,790 + +0.7 990,855 + -0.9 990,856 - -0.1 990,885 + +0.3 990,997 - -1.2 991,108 + OLJFJH_04990 0.19 -0.3 991,290 + OLJFJH_04990 0.35 -0.7 991,522 + OLJFJH_04990 0.55 -1.2 991,612 + OLJFJH_04990 0.63 -0.9 991,707 - OLJFJH_04990 0.71 -0.3 991,856 - OLJFJH_04990 0.84 +0.3 992,026 + -0.7 992,120 + -0.3 992,180 + OLJFJH_04995 0.13 +0.0 992,250 - OLJFJH_04995 0.26 +0.3 992,259 - OLJFJH_04995 0.27 -1.1 992,275 + OLJFJH_04995 0.30 +0.1 992,287 + OLJFJH_04995 0.32 +2.9 992,295 - OLJFJH_04995 0.34 -0.0 992,351 + OLJFJH_04995 0.44 -1.4 992,373 + OLJFJH_04995 0.48 -0.1 992,386 + OLJFJH_04995 0.51 +1.2 992,386 + OLJFJH_04995 0.51 +0.1 992,553 + OLJFJH_04995 0.81 +0.9 992,629 - -3.7 992,658 + +1.1 992,659 - -0.5 992,742 + -2.3 992,863 - OLJFJH_05000 0.37 -0.5
Or see this region's nucleotide sequence