Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-8
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_03735 and OLJFJH_03740 are separated by 180 nucleotides OLJFJH_03740 and OLJFJH_03745 are separated by 74 nucleotides OLJFJH_03745 and OLJFJH_03750 overlap by 1 nucleotides OLJFJH_03750 and OLJFJH_03755 are separated by 118 nucleotides
OLJFJH_03735: OLJFJH_03735 - hypothetical protein, at 723,938 to 725,668
_03735
OLJFJH_03740: OLJFJH_03740 - alternative ribosome-rescue factor A, at 725,849 to 726,073
_03740
OLJFJH_03745: OLJFJH_03745 - Zn(2+)-responsive transcriptional regulator, at 726,148 to 726,561
_03745
OLJFJH_03750: OLJFJH_03750 - DUF1992 domain-containing protein, at 726,561 to 726,932
_03750
OLJFJH_03755: OLJFJH_03755 - 50S ribosomal protein L17, at 727,051 to 727,437
_03755
Position (kb) 725
726
727 Strain fitness (log2 ratio) -2
-1
0
1
2 at 724.956 kb on + strand, within OLJFJH_03735 at 725.428 kb on + strand, within OLJFJH_03735 at 725.712 kb on + strand at 725.713 kb on - strand at 725.713 kb on - strand at 725.713 kb on - strand at 725.756 kb on + strand at 725.806 kb on + strand at 725.807 kb on - strand at 725.836 kb on + strand at 725.887 kb on + strand, within OLJFJH_03740 at 725.892 kb on - strand, within OLJFJH_03740 at 726.055 kb on + strand at 726.055 kb on + strand at 726.073 kb on + strand at 726.149 kb on + strand at 726.149 kb on + strand at 726.150 kb on - strand at 726.205 kb on - strand, within OLJFJH_03745 at 726.255 kb on + strand, within OLJFJH_03745 at 726.255 kb on + strand, within OLJFJH_03745 at 726.255 kb on + strand, within OLJFJH_03745 at 726.256 kb on - strand, within OLJFJH_03745 at 726.443 kb on + strand, within OLJFJH_03745 at 726.513 kb on + strand, within OLJFJH_03745 at 726.513 kb on + strand, within OLJFJH_03745 at 726.575 kb on + strand at 726.575 kb on + strand at 726.648 kb on + strand, within OLJFJH_03750 at 726.816 kb on + strand, within OLJFJH_03750 at 726.845 kb on + strand, within OLJFJH_03750 at 726.845 kb on + strand, within OLJFJH_03750 at 726.845 kb on + strand, within OLJFJH_03750 at 726.846 kb on - strand, within OLJFJH_03750 at 726.846 kb on - strand, within OLJFJH_03750 at 726.846 kb on - strand, within OLJFJH_03750 at 726.866 kb on + strand, within OLJFJH_03750 at 726.899 kb on + strand at 726.899 kb on + strand at 726.899 kb on + strand at 726.899 kb on + strand at 726.900 kb on - strand at 726.965 kb on - strand at 726.972 kb on + strand at 726.973 kb on - strand at 726.975 kb on - strand at 727.008 kb on + strand at 727.008 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-8 remove 724,956 + OLJFJH_03735 0.59 -2.0 725,428 + OLJFJH_03735 0.86 -2.0 725,712 + +0.7 725,713 - +2.6 725,713 - -2.0 725,713 - -0.8 725,756 + +0.6 725,806 + -2.3 725,807 - +0.1 725,836 + -0.2 725,887 + OLJFJH_03740 0.17 -0.1 725,892 - OLJFJH_03740 0.19 -1.8 726,055 + +0.4 726,055 + +0.5 726,073 + +1.2 726,149 + +1.8 726,149 + +2.2 726,150 - -1.9 726,205 - OLJFJH_03745 0.14 -0.6 726,255 + OLJFJH_03745 0.26 +1.0 726,255 + OLJFJH_03745 0.26 -0.0 726,255 + OLJFJH_03745 0.26 -0.9 726,256 - OLJFJH_03745 0.26 -0.2 726,443 + OLJFJH_03745 0.71 +0.4 726,513 + OLJFJH_03745 0.88 +0.2 726,513 + OLJFJH_03745 0.88 -2.5 726,575 + -0.5 726,575 + -1.6 726,648 + OLJFJH_03750 0.23 +1.0 726,816 + OLJFJH_03750 0.69 +0.2 726,845 + OLJFJH_03750 0.76 +1.3 726,845 + OLJFJH_03750 0.76 -1.4 726,845 + OLJFJH_03750 0.76 -0.2 726,846 - OLJFJH_03750 0.77 +1.0 726,846 - OLJFJH_03750 0.77 -0.9 726,846 - OLJFJH_03750 0.77 -0.0 726,866 + OLJFJH_03750 0.82 +0.9 726,899 + +1.7 726,899 + -0.1 726,899 + -0.2 726,899 + -1.4 726,900 - +0.4 726,965 - -0.8 726,972 + -1.5 726,973 - -1.2 726,975 - -0.1 727,008 + -1.4 727,008 + -0.6
Or see this region's nucleotide sequence