Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-8
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_03450 and OLJFJH_03455 are separated by 23 nucleotides OLJFJH_03455 and OLJFJH_03460 are separated by 297 nucleotides
OLJFJH_03450: OLJFJH_03450 - aromatic amino acid aminotransferase, at 667,289 to 668,482
_03450
OLJFJH_03455: OLJFJH_03455 - hypothetical protein, at 668,506 to 668,787
_03455
OLJFJH_03460: OLJFJH_03460 - replicative DNA helicase, at 669,085 to 670,500
_03460
Position (kb) 668
669 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 667.529 kb on - strand, within OLJFJH_03450 at 667.529 kb on - strand, within OLJFJH_03450 at 667.534 kb on + strand, within OLJFJH_03450 at 667.582 kb on + strand, within OLJFJH_03450 at 667.614 kb on + strand, within OLJFJH_03450 at 667.632 kb on + strand, within OLJFJH_03450 at 667.633 kb on - strand, within OLJFJH_03450 at 667.637 kb on - strand, within OLJFJH_03450 at 667.756 kb on + strand, within OLJFJH_03450 at 667.756 kb on + strand, within OLJFJH_03450 at 667.760 kb on + strand, within OLJFJH_03450 at 667.804 kb on - strand, within OLJFJH_03450 at 667.804 kb on - strand, within OLJFJH_03450 at 668.130 kb on + strand, within OLJFJH_03450 at 668.137 kb on + strand, within OLJFJH_03450 at 668.374 kb on - strand at 668.377 kb on - strand at 668.377 kb on - strand at 668.499 kb on - strand at 668.507 kb on + strand at 668.507 kb on + strand at 668.507 kb on + strand at 668.507 kb on + strand at 668.542 kb on + strand, within OLJFJH_03455 at 668.543 kb on - strand, within OLJFJH_03455 at 668.803 kb on + strand at 668.814 kb on - strand at 668.814 kb on - strand at 668.981 kb on - strand at 668.986 kb on + strand at 669.038 kb on + strand at 669.038 kb on + strand at 669.038 kb on + strand at 669.039 kb on - strand at 669.039 kb on - strand at 669.039 kb on - strand at 669.114 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-8 remove 667,529 - OLJFJH_03450 0.20 +3.6 667,529 - OLJFJH_03450 0.20 -0.6 667,534 + OLJFJH_03450 0.21 -1.3 667,582 + OLJFJH_03450 0.25 -2.6 667,614 + OLJFJH_03450 0.27 -0.1 667,632 + OLJFJH_03450 0.29 -0.1 667,633 - OLJFJH_03450 0.29 -0.4 667,637 - OLJFJH_03450 0.29 +0.2 667,756 + OLJFJH_03450 0.39 -1.8 667,756 + OLJFJH_03450 0.39 -1.3 667,760 + OLJFJH_03450 0.39 +1.6 667,804 - OLJFJH_03450 0.43 -1.1 667,804 - OLJFJH_03450 0.43 -1.3 668,130 + OLJFJH_03450 0.70 -1.5 668,137 + OLJFJH_03450 0.71 -0.6 668,374 - -0.4 668,377 - -0.1 668,377 - +3.1 668,499 - -0.6 668,507 + -0.4 668,507 + +0.6 668,507 + -0.6 668,507 + +0.1 668,542 + OLJFJH_03455 0.13 -2.0 668,543 - OLJFJH_03455 0.13 +0.1 668,803 + +1.3 668,814 - +1.8 668,814 - +0.8 668,981 - +0.2 668,986 + -0.7 669,038 + +3.0 669,038 + -0.2 669,038 + +0.5 669,039 - +0.2 669,039 - -0.1 669,039 - -1.2 669,114 - +1.4
Or see this region's nucleotide sequence