Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_04793

Experiment: Peptone 2.5 mg/mL (C) complex media

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_04792 and BACOVA_04793 overlap by 11 nucleotidesBACOVA_04793 and BACOVA_04794 overlap by 20 nucleotides BACOVA_04792: BACOVA_04792 - hypothetical protein, at 144,532 to 145,797 _04792 BACOVA_04793: BACOVA_04793 - ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein, at 145,787 to 148,090 _04793 BACOVA_04794: BACOVA_04794 - hypothetical protein, at 148,071 to 149,345 _04794 Position (kb) 145 146 147 148 149Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 144.807 kb on - strand, within BACOVA_04792at 144.807 kb on - strand, within BACOVA_04792at 144.810 kb on + strand, within BACOVA_04792at 144.810 kb on + strand, within BACOVA_04792at 144.810 kb on + strand, within BACOVA_04792at 144.810 kb on + strand, within BACOVA_04792at 144.895 kb on - strand, within BACOVA_04792at 144.918 kb on + strand, within BACOVA_04792at 144.918 kb on + strand, within BACOVA_04792at 144.967 kb on + strand, within BACOVA_04792at 144.967 kb on + strand, within BACOVA_04792at 144.968 kb on - strand, within BACOVA_04792at 144.990 kb on + strand, within BACOVA_04792at 144.992 kb on + strand, within BACOVA_04792at 145.008 kb on + strand, within BACOVA_04792at 145.009 kb on - strand, within BACOVA_04792at 145.074 kb on + strand, within BACOVA_04792at 145.085 kb on - strand, within BACOVA_04792at 145.123 kb on + strand, within BACOVA_04792at 145.123 kb on + strand, within BACOVA_04792at 145.124 kb on - strand, within BACOVA_04792at 145.124 kb on - strand, within BACOVA_04792at 145.147 kb on - strand, within BACOVA_04792at 145.300 kb on + strand, within BACOVA_04792at 145.301 kb on - strand, within BACOVA_04792at 145.304 kb on + strand, within BACOVA_04792at 145.304 kb on + strand, within BACOVA_04792at 145.304 kb on + strand, within BACOVA_04792at 145.304 kb on + strand, within BACOVA_04792at 145.305 kb on - strand, within BACOVA_04792at 145.305 kb on - strand, within BACOVA_04792at 145.306 kb on + strand, within BACOVA_04792at 145.306 kb on + strand, within BACOVA_04792at 145.306 kb on + strand, within BACOVA_04792at 145.306 kb on + strand, within BACOVA_04792at 145.306 kb on + strand, within BACOVA_04792at 145.307 kb on - strand, within BACOVA_04792at 145.307 kb on - strand, within BACOVA_04792at 145.307 kb on - strand, within BACOVA_04792at 145.308 kb on + strand, within BACOVA_04792at 145.308 kb on + strand, within BACOVA_04792at 145.308 kb on + strand, within BACOVA_04792at 145.308 kb on + strand, within BACOVA_04792at 145.309 kb on - strand, within BACOVA_04792at 145.309 kb on - strand, within BACOVA_04792at 145.309 kb on - strand, within BACOVA_04792at 145.325 kb on - strand, within BACOVA_04792at 145.355 kb on - strand, within BACOVA_04792at 145.368 kb on + strand, within BACOVA_04792at 145.374 kb on + strand, within BACOVA_04792at 145.403 kb on - strand, within BACOVA_04792at 145.405 kb on - strand, within BACOVA_04792at 145.405 kb on - strand, within BACOVA_04792at 145.408 kb on - strand, within BACOVA_04792at 145.408 kb on - strand, within BACOVA_04792at 145.417 kb on + strand, within BACOVA_04792at 145.418 kb on - strand, within BACOVA_04792at 145.426 kb on - strand, within BACOVA_04792at 145.445 kb on - strand, within BACOVA_04792at 145.454 kb on - strand, within BACOVA_04792at 145.454 kb on - strand, within BACOVA_04792at 145.462 kb on - strand, within BACOVA_04792at 145.462 kb on - strand, within BACOVA_04792at 145.462 kb on - strand, within BACOVA_04792at 145.465 kb on - strand, within BACOVA_04792at 145.465 kb on - strand, within BACOVA_04792at 145.465 kb on - strand, within BACOVA_04792at 145.473 kb on + strand, within BACOVA_04792at 145.473 kb on + strand, within BACOVA_04792at 145.487 kb on + strand, within BACOVA_04792at 145.488 kb on - strand, within BACOVA_04792at 145.510 kb on + strand, within BACOVA_04792at 145.511 kb on - strand, within BACOVA_04792at 145.546 kb on + strand, within BACOVA_04792at 145.565 kb on - strand, within BACOVA_04792at 145.566 kb on + strand, within BACOVA_04792at 145.566 kb on + strand, within BACOVA_04792at 145.566 kb on + strand, within BACOVA_04792at 145.567 kb on - strand, within BACOVA_04792at 145.588 kb on + strand, within BACOVA_04792at 145.590 kb on + strand, within BACOVA_04792at 145.591 kb on - strand, within BACOVA_04792at 145.594 kb on - strand, within BACOVA_04792at 145.636 kb on - strand, within BACOVA_04792at 145.648 kb on + strand, within BACOVA_04792at 145.667 kb on + strand, within BACOVA_04792at 145.668 kb on - strand, within BACOVA_04792at 145.710 kb on + strandat 145.731 kb on + strandat 145.731 kb on + strandat 145.742 kb on + strandat 145.743 kb on - strandat 145.743 kb on - strandat 145.745 kb on - strandat 145.792 kb on - strandat 145.798 kb on + strandat 145.831 kb on + strandat 145.888 kb on + strandat 145.914 kb on + strandat 145.922 kb on + strandat 145.978 kb on + strandat 146.075 kb on + strand, within BACOVA_04793at 146.082 kb on + strand, within BACOVA_04793at 146.086 kb on + strand, within BACOVA_04793at 146.117 kb on + strand, within BACOVA_04793at 146.117 kb on + strand, within BACOVA_04793at 146.164 kb on + strand, within BACOVA_04793at 146.168 kb on + strand, within BACOVA_04793at 146.208 kb on + strand, within BACOVA_04793at 146.208 kb on + strand, within BACOVA_04793at 146.212 kb on + strand, within BACOVA_04793at 146.228 kb on + strand, within BACOVA_04793at 146.275 kb on + strand, within BACOVA_04793at 146.275 kb on + strand, within BACOVA_04793at 146.351 kb on + strand, within BACOVA_04793at 146.435 kb on + strand, within BACOVA_04793at 146.456 kb on + strand, within BACOVA_04793at 146.464 kb on + strand, within BACOVA_04793at 146.477 kb on + strand, within BACOVA_04793at 146.529 kb on + strand, within BACOVA_04793at 146.612 kb on + strand, within BACOVA_04793at 146.612 kb on + strand, within BACOVA_04793at 146.667 kb on + strand, within BACOVA_04793at 146.694 kb on + strand, within BACOVA_04793at 146.714 kb on + strand, within BACOVA_04793at 146.804 kb on + strand, within BACOVA_04793at 146.833 kb on + strand, within BACOVA_04793at 146.833 kb on + strand, within BACOVA_04793at 146.876 kb on + strand, within BACOVA_04793at 146.923 kb on + strand, within BACOVA_04793at 146.923 kb on + strand, within BACOVA_04793at 146.936 kb on + strand, within BACOVA_04793at 146.936 kb on + strand, within BACOVA_04793at 146.942 kb on + strand, within BACOVA_04793at 146.956 kb on + strand, within BACOVA_04793at 146.988 kb on + strand, within BACOVA_04793at 146.988 kb on + strand, within BACOVA_04793at 146.988 kb on + strand, within BACOVA_04793at 147.071 kb on + strand, within BACOVA_04793at 147.151 kb on + strand, within BACOVA_04793at 147.151 kb on + strand, within BACOVA_04793at 147.154 kb on + strand, within BACOVA_04793at 147.171 kb on + strand, within BACOVA_04793at 147.212 kb on + strand, within BACOVA_04793at 147.212 kb on + strand, within BACOVA_04793at 147.212 kb on + strand, within BACOVA_04793at 147.218 kb on + strand, within BACOVA_04793at 147.218 kb on + strand, within BACOVA_04793at 147.248 kb on + strand, within BACOVA_04793at 147.277 kb on + strand, within BACOVA_04793at 147.286 kb on + strand, within BACOVA_04793at 147.302 kb on + strand, within BACOVA_04793at 147.302 kb on + strand, within BACOVA_04793at 147.341 kb on + strand, within BACOVA_04793at 147.344 kb on + strand, within BACOVA_04793at 147.356 kb on + strand, within BACOVA_04793at 147.404 kb on + strand, within BACOVA_04793at 147.484 kb on + strand, within BACOVA_04793at 147.551 kb on + strand, within BACOVA_04793at 147.589 kb on + strand, within BACOVA_04793at 147.589 kb on + strand, within BACOVA_04793at 147.599 kb on - strand, within BACOVA_04793at 147.603 kb on + strand, within BACOVA_04793at 147.603 kb on + strand, within BACOVA_04793at 147.603 kb on + strand, within BACOVA_04793at 147.604 kb on - strand, within BACOVA_04793at 147.611 kb on + strand, within BACOVA_04793at 147.611 kb on + strand, within BACOVA_04793at 147.611 kb on + strand, within BACOVA_04793at 147.640 kb on + strand, within BACOVA_04793at 147.726 kb on + strand, within BACOVA_04793at 147.726 kb on + strand, within BACOVA_04793at 147.730 kb on + strand, within BACOVA_04793at 147.730 kb on + strand, within BACOVA_04793at 147.757 kb on + strand, within BACOVA_04793at 147.763 kb on + strand, within BACOVA_04793at 147.797 kb on - strand, within BACOVA_04793at 147.808 kb on + strand, within BACOVA_04793at 147.868 kb on + strandat 147.901 kb on + strandat 147.901 kb on + strandat 147.961 kb on - strandat 148.003 kb on + strandat 148.007 kb on + strandat 148.007 kb on + strandat 148.007 kb on + strandat 148.007 kb on + strandat 148.008 kb on - strandat 148.008 kb on - strandat 148.008 kb on - strandat 148.055 kb on + strandat 148.056 kb on - strandat 148.069 kb on + strandat 148.072 kb on + strandat 148.076 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Peptone 2.5 mg/mL (C) complex media
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144,807 - BACOVA_04792 0.22 +0.1
144,807 - BACOVA_04792 0.22 +0.1
144,810 + BACOVA_04792 0.22 +2.5
144,810 + BACOVA_04792 0.22 -0.6
144,810 + BACOVA_04792 0.22 -0.8
144,810 + BACOVA_04792 0.22 -0.1
144,895 - BACOVA_04792 0.29 -0.8
144,918 + BACOVA_04792 0.30 +0.7
144,918 + BACOVA_04792 0.30 +0.0
144,967 + BACOVA_04792 0.34 +1.0
144,967 + BACOVA_04792 0.34 +0.3
144,968 - BACOVA_04792 0.34 -0.6
144,990 + BACOVA_04792 0.36 +2.2
144,992 + BACOVA_04792 0.36 +0.9
145,008 + BACOVA_04792 0.38 -0.1
145,009 - BACOVA_04792 0.38 +0.0
145,074 + BACOVA_04792 0.43 +0.6
145,085 - BACOVA_04792 0.44 -0.3
145,123 + BACOVA_04792 0.47 -0.1
145,123 + BACOVA_04792 0.47 -0.8
145,124 - BACOVA_04792 0.47 +0.2
145,124 - BACOVA_04792 0.47 -1.7
145,147 - BACOVA_04792 0.49 +1.2
145,300 + BACOVA_04792 0.61 +0.3
145,301 - BACOVA_04792 0.61 -0.8
145,304 + BACOVA_04792 0.61 +0.7
145,304 + BACOVA_04792 0.61 -0.6
145,304 + BACOVA_04792 0.61 -0.5
145,304 + BACOVA_04792 0.61 +0.3
145,305 - BACOVA_04792 0.61 +0.3
145,305 - BACOVA_04792 0.61 +0.9
145,306 + BACOVA_04792 0.61 +2.5
145,306 + BACOVA_04792 0.61 -0.9
145,306 + BACOVA_04792 0.61 +0.4
145,306 + BACOVA_04792 0.61 -0.5
145,306 + BACOVA_04792 0.61 -0.0
145,307 - BACOVA_04792 0.61 -0.1
145,307 - BACOVA_04792 0.61 -0.2
145,307 - BACOVA_04792 0.61 -0.7
145,308 + BACOVA_04792 0.61 -0.0
145,308 + BACOVA_04792 0.61 +0.9
145,308 + BACOVA_04792 0.61 -1.2
145,308 + BACOVA_04792 0.61 +0.2
145,309 - BACOVA_04792 0.61 +0.0
145,309 - BACOVA_04792 0.61 -1.3
145,309 - BACOVA_04792 0.61 -0.9
145,325 - BACOVA_04792 0.63 -0.6
145,355 - BACOVA_04792 0.65 -0.6
145,368 + BACOVA_04792 0.66 -0.0
145,374 + BACOVA_04792 0.67 +0.9
145,403 - BACOVA_04792 0.69 +0.2
145,405 - BACOVA_04792 0.69 +0.1
145,405 - BACOVA_04792 0.69 +0.3
145,408 - BACOVA_04792 0.69 -0.1
145,408 - BACOVA_04792 0.69 -1.1
145,417 + BACOVA_04792 0.70 +0.1
145,418 - BACOVA_04792 0.70 -1.4
145,426 - BACOVA_04792 0.71 -0.8
145,445 - BACOVA_04792 0.72 +1.2
145,454 - BACOVA_04792 0.73 +1.0
145,454 - BACOVA_04792 0.73 +0.5
145,462 - BACOVA_04792 0.73 +0.7
145,462 - BACOVA_04792 0.73 +0.5
145,462 - BACOVA_04792 0.73 -0.3
145,465 - BACOVA_04792 0.74 -0.8
145,465 - BACOVA_04792 0.74 -1.0
145,465 - BACOVA_04792 0.74 -1.2
145,473 + BACOVA_04792 0.74 +0.7
145,473 + BACOVA_04792 0.74 +0.6
145,487 + BACOVA_04792 0.75 +0.8
145,488 - BACOVA_04792 0.76 -0.6
145,510 + BACOVA_04792 0.77 -0.3
145,511 - BACOVA_04792 0.77 +0.3
145,546 + BACOVA_04792 0.80 -0.4
145,565 - BACOVA_04792 0.82 -0.0
145,566 + BACOVA_04792 0.82 -0.1
145,566 + BACOVA_04792 0.82 -0.7
145,566 + BACOVA_04792 0.82 +0.9
145,567 - BACOVA_04792 0.82 +0.0
145,588 + BACOVA_04792 0.83 -0.3
145,590 + BACOVA_04792 0.84 -0.2
145,591 - BACOVA_04792 0.84 -2.4
145,594 - BACOVA_04792 0.84 +1.0
145,636 - BACOVA_04792 0.87 +0.2
145,648 + BACOVA_04792 0.88 -2.4
145,667 + BACOVA_04792 0.90 -0.5
145,668 - BACOVA_04792 0.90 -1.1
145,710 + +0.7
145,731 + -0.4
145,731 + -2.2
145,742 + +1.1
145,743 - -0.2
145,743 - -1.4
145,745 - +0.7
145,792 - -3.6
145,798 + +0.9
145,831 + +0.1
145,888 + +0.9
145,914 + +0.1
145,922 + -0.7
145,978 + -0.7
146,075 + BACOVA_04793 0.12 +0.4
146,082 + BACOVA_04793 0.13 -0.7
146,086 + BACOVA_04793 0.13 -0.9
146,117 + BACOVA_04793 0.14 +1.5
146,117 + BACOVA_04793 0.14 -1.0
146,164 + BACOVA_04793 0.16 +1.3
146,168 + BACOVA_04793 0.17 +0.4
146,208 + BACOVA_04793 0.18 -0.1
146,208 + BACOVA_04793 0.18 +0.1
146,212 + BACOVA_04793 0.18 +0.3
146,228 + BACOVA_04793 0.19 -0.4
146,275 + BACOVA_04793 0.21 +0.9
146,275 + BACOVA_04793 0.21 -0.3
146,351 + BACOVA_04793 0.24 +0.7
146,435 + BACOVA_04793 0.28 +1.7
146,456 + BACOVA_04793 0.29 -0.6
146,464 + BACOVA_04793 0.29 +0.8
146,477 + BACOVA_04793 0.30 -0.5
146,529 + BACOVA_04793 0.32 -0.9
146,612 + BACOVA_04793 0.36 +0.3
146,612 + BACOVA_04793 0.36 -2.3
146,667 + BACOVA_04793 0.38 -0.3
146,694 + BACOVA_04793 0.39 -0.0
146,714 + BACOVA_04793 0.40 -0.0
146,804 + BACOVA_04793 0.44 +0.5
146,833 + BACOVA_04793 0.45 +0.3
146,833 + BACOVA_04793 0.45 -0.7
146,876 + BACOVA_04793 0.47 -0.4
146,923 + BACOVA_04793 0.49 +0.3
146,923 + BACOVA_04793 0.49 -1.3
146,936 + BACOVA_04793 0.50 +0.8
146,936 + BACOVA_04793 0.50 -0.5
146,942 + BACOVA_04793 0.50 -1.2
146,956 + BACOVA_04793 0.51 +0.1
146,988 + BACOVA_04793 0.52 -2.4
146,988 + BACOVA_04793 0.52 +0.9
146,988 + BACOVA_04793 0.52 -0.5
147,071 + BACOVA_04793 0.56 -0.4
147,151 + BACOVA_04793 0.59 +0.1
147,151 + BACOVA_04793 0.59 +0.5
147,154 + BACOVA_04793 0.59 +1.5
147,171 + BACOVA_04793 0.60 -0.1
147,212 + BACOVA_04793 0.62 +0.2
147,212 + BACOVA_04793 0.62 -0.1
147,212 + BACOVA_04793 0.62 -1.2
147,218 + BACOVA_04793 0.62 -0.9
147,218 + BACOVA_04793 0.62 +1.2
147,248 + BACOVA_04793 0.63 -0.1
147,277 + BACOVA_04793 0.65 -0.5
147,286 + BACOVA_04793 0.65 +0.2
147,302 + BACOVA_04793 0.66 +0.5
147,302 + BACOVA_04793 0.66 -1.1
147,341 + BACOVA_04793 0.67 -0.3
147,344 + BACOVA_04793 0.68 -0.2
147,356 + BACOVA_04793 0.68 +0.1
147,404 + BACOVA_04793 0.70 -1.2
147,484 + BACOVA_04793 0.74 +1.3
147,551 + BACOVA_04793 0.77 -2.3
147,589 + BACOVA_04793 0.78 -0.1
147,589 + BACOVA_04793 0.78 -0.1
147,599 - BACOVA_04793 0.79 -2.3
147,603 + BACOVA_04793 0.79 -0.9
147,603 + BACOVA_04793 0.79 +1.2
147,603 + BACOVA_04793 0.79 -0.2
147,604 - BACOVA_04793 0.79 -0.1
147,611 + BACOVA_04793 0.79 +0.4
147,611 + BACOVA_04793 0.79 -0.0
147,611 + BACOVA_04793 0.79 -0.3
147,640 + BACOVA_04793 0.80 +1.1
147,726 + BACOVA_04793 0.84 +0.2
147,726 + BACOVA_04793 0.84 -0.2
147,730 + BACOVA_04793 0.84 +0.4
147,730 + BACOVA_04793 0.84 +0.6
147,757 + BACOVA_04793 0.86 +0.9
147,763 + BACOVA_04793 0.86 -0.9
147,797 - BACOVA_04793 0.87 -1.4
147,808 + BACOVA_04793 0.88 -0.8
147,868 + -0.3
147,901 + +0.3
147,901 + -2.3
147,961 - +0.1
148,003 + -2.5
148,007 + -0.5
148,007 + +0.0
148,007 + -0.4
148,007 + -0.0
148,008 - +0.3
148,008 - -0.8
148,008 - -0.1
148,055 + +1.2
148,056 - +1.9
148,069 + +0.4
148,072 + -0.3
148,076 + -1.1

Or see this region's nucleotide sequence