Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_04706

Experiment: Peptone 2.5 mg/mL (C) complex media

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_04705 and BACOVA_04706 overlap by 47 nucleotidesBACOVA_04706 and BACOVA_04707 are separated by 85 nucleotides BACOVA_04705: BACOVA_04705 - TonB-dependent receptor, at 70,546 to 72,696 _04705 BACOVA_04706: BACOVA_04706 - hypothetical protein, at 72,650 to 73,729 _04706 BACOVA_04707: BACOVA_04707 - hypothetical protein, at 73,815 to 75,914 _04707 Position (kb) 72 73 74Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 71.675 kb on + strand, within BACOVA_04705at 71.675 kb on + strand, within BACOVA_04705at 71.676 kb on - strand, within BACOVA_04705at 71.692 kb on + strand, within BACOVA_04705at 71.693 kb on - strand, within BACOVA_04705at 71.844 kb on + strand, within BACOVA_04705at 71.844 kb on + strand, within BACOVA_04705at 71.846 kb on + strand, within BACOVA_04705at 71.846 kb on + strand, within BACOVA_04705at 71.846 kb on + strand, within BACOVA_04705at 71.847 kb on - strand, within BACOVA_04705at 71.847 kb on - strand, within BACOVA_04705at 71.888 kb on + strand, within BACOVA_04705at 71.888 kb on + strand, within BACOVA_04705at 71.889 kb on - strand, within BACOVA_04705at 71.889 kb on - strand, within BACOVA_04705at 71.988 kb on + strand, within BACOVA_04705at 71.993 kb on - strand, within BACOVA_04705at 72.015 kb on - strand, within BACOVA_04705at 72.015 kb on - strand, within BACOVA_04705at 72.020 kb on + strand, within BACOVA_04705at 72.021 kb on - strand, within BACOVA_04705at 72.331 kb on - strand, within BACOVA_04705at 72.334 kb on - strand, within BACOVA_04705at 72.617 kb on - strandat 72.623 kb on + strandat 72.623 kb on + strandat 72.624 kb on - strandat 72.625 kb on + strandat 72.625 kb on + strandat 72.626 kb on - strandat 72.626 kb on - strandat 72.688 kb on - strandat 72.720 kb on + strandat 72.726 kb on + strandat 72.727 kb on - strandat 72.728 kb on + strandat 72.728 kb on + strandat 72.768 kb on + strand, within BACOVA_04706at 72.804 kb on + strand, within BACOVA_04706at 72.807 kb on + strand, within BACOVA_04706at 72.808 kb on - strand, within BACOVA_04706at 72.823 kb on - strand, within BACOVA_04706at 72.886 kb on + strand, within BACOVA_04706at 72.895 kb on - strand, within BACOVA_04706at 72.949 kb on + strand, within BACOVA_04706at 73.020 kb on + strand, within BACOVA_04706at 73.067 kb on - strand, within BACOVA_04706at 73.189 kb on - strand, within BACOVA_04706at 73.269 kb on + strand, within BACOVA_04706at 73.269 kb on + strand, within BACOVA_04706at 73.283 kb on + strand, within BACOVA_04706at 73.284 kb on - strand, within BACOVA_04706at 73.284 kb on - strand, within BACOVA_04706at 73.320 kb on + strand, within BACOVA_04706at 73.320 kb on + strand, within BACOVA_04706at 73.321 kb on - strand, within BACOVA_04706at 73.348 kb on + strand, within BACOVA_04706at 73.548 kb on + strand, within BACOVA_04706at 73.548 kb on + strand, within BACOVA_04706at 73.549 kb on - strand, within BACOVA_04706at 73.552 kb on - strand, within BACOVA_04706at 73.700 kb on + strandat 73.701 kb on - strandat 73.701 kb on - strandat 73.701 kb on - strandat 73.729 kb on + strandat 73.729 kb on + strandat 73.741 kb on + strandat 73.742 kb on - strandat 73.748 kb on - strandat 73.748 kb on - strandat 73.764 kb on - strandat 73.779 kb on + strandat 73.779 kb on + strandat 73.816 kb on + strandat 73.816 kb on + strandat 73.817 kb on - strandat 73.817 kb on - strandat 73.832 kb on - strandat 73.832 kb on - strandat 73.832 kb on - strandat 73.832 kb on - strandat 73.842 kb on + strandat 73.868 kb on - strandat 73.881 kb on + strandat 73.881 kb on + strandat 73.882 kb on - strandat 73.882 kb on - strandat 73.901 kb on + strandat 73.932 kb on + strandat 73.956 kb on - strandat 74.037 kb on + strand, within BACOVA_04707at 74.038 kb on - strand, within BACOVA_04707at 74.038 kb on - strand, within BACOVA_04707at 74.050 kb on - strand, within BACOVA_04707at 74.052 kb on - strand, within BACOVA_04707at 74.052 kb on - strand, within BACOVA_04707at 74.141 kb on - strand, within BACOVA_04707at 74.150 kb on + strand, within BACOVA_04707at 74.159 kb on + strand, within BACOVA_04707at 74.163 kb on + strand, within BACOVA_04707at 74.163 kb on + strand, within BACOVA_04707at 74.164 kb on - strand, within BACOVA_04707at 74.164 kb on - strand, within BACOVA_04707at 74.164 kb on - strand, within BACOVA_04707at 74.244 kb on + strand, within BACOVA_04707at 74.279 kb on + strand, within BACOVA_04707at 74.295 kb on - strand, within BACOVA_04707at 74.369 kb on + strand, within BACOVA_04707at 74.369 kb on + strand, within BACOVA_04707at 74.369 kb on + strand, within BACOVA_04707at 74.370 kb on - strand, within BACOVA_04707at 74.370 kb on - strand, within BACOVA_04707at 74.371 kb on + strand, within BACOVA_04707at 74.393 kb on + strand, within BACOVA_04707at 74.446 kb on - strand, within BACOVA_04707at 74.487 kb on + strand, within BACOVA_04707at 74.531 kb on - strand, within BACOVA_04707at 74.534 kb on + strand, within BACOVA_04707at 74.552 kb on + strand, within BACOVA_04707at 74.554 kb on + strand, within BACOVA_04707at 74.555 kb on - strand, within BACOVA_04707at 74.622 kb on + strand, within BACOVA_04707at 74.622 kb on + strand, within BACOVA_04707at 74.623 kb on - strand, within BACOVA_04707at 74.644 kb on - strand, within BACOVA_04707at 74.649 kb on - strand, within BACOVA_04707at 74.666 kb on + strand, within BACOVA_04707at 74.674 kb on - strand, within BACOVA_04707at 74.676 kb on - strand, within BACOVA_04707at 74.691 kb on + strand, within BACOVA_04707at 74.691 kb on + strand, within BACOVA_04707at 74.727 kb on + strand, within BACOVA_04707

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Per-strain Table

Position Strand Gene LocusTag Fraction Peptone 2.5 mg/mL (C) complex media
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71,675 + BACOVA_04705 0.52 -0.7
71,675 + BACOVA_04705 0.52 -1.7
71,676 - BACOVA_04705 0.53 +0.4
71,692 + BACOVA_04705 0.53 -0.8
71,693 - BACOVA_04705 0.53 -1.0
71,844 + BACOVA_04705 0.60 -1.1
71,844 + BACOVA_04705 0.60 -0.5
71,846 + BACOVA_04705 0.60 -1.1
71,846 + BACOVA_04705 0.60 +0.0
71,846 + BACOVA_04705 0.60 -0.9
71,847 - BACOVA_04705 0.60 +0.6
71,847 - BACOVA_04705 0.60 +0.0
71,888 + BACOVA_04705 0.62 -0.8
71,888 + BACOVA_04705 0.62 +1.4
71,889 - BACOVA_04705 0.62 -0.2
71,889 - BACOVA_04705 0.62 +0.9
71,988 + BACOVA_04705 0.67 -0.3
71,993 - BACOVA_04705 0.67 +0.5
72,015 - BACOVA_04705 0.68 -0.1
72,015 - BACOVA_04705 0.68 -0.5
72,020 + BACOVA_04705 0.69 -2.2
72,021 - BACOVA_04705 0.69 +0.6
72,331 - BACOVA_04705 0.83 +0.2
72,334 - BACOVA_04705 0.83 -0.7
72,617 - -0.2
72,623 + -0.8
72,623 + -1.1
72,624 - -0.1
72,625 + +0.2
72,625 + -1.2
72,626 - -0.3
72,626 - -1.0
72,688 - -0.4
72,720 + -0.7
72,726 + -1.9
72,727 - -1.9
72,728 + -0.6
72,728 + +0.0
72,768 + BACOVA_04706 0.11 -0.4
72,804 + BACOVA_04706 0.14 -1.7
72,807 + BACOVA_04706 0.15 -1.0
72,808 - BACOVA_04706 0.15 -1.0
72,823 - BACOVA_04706 0.16 -0.4
72,886 + BACOVA_04706 0.22 -0.5
72,895 - BACOVA_04706 0.23 -0.9
72,949 + BACOVA_04706 0.28 -0.5
73,020 + BACOVA_04706 0.34 -0.5
73,067 - BACOVA_04706 0.39 -1.6
73,189 - BACOVA_04706 0.50 -0.6
73,269 + BACOVA_04706 0.57 -0.7
73,269 + BACOVA_04706 0.57 +0.0
73,283 + BACOVA_04706 0.59 -0.3
73,284 - BACOVA_04706 0.59 +1.3
73,284 - BACOVA_04706 0.59 -1.4
73,320 + BACOVA_04706 0.62 -0.9
73,320 + BACOVA_04706 0.62 -2.4
73,321 - BACOVA_04706 0.62 +1.2
73,348 + BACOVA_04706 0.65 +3.1
73,548 + BACOVA_04706 0.83 -0.1
73,548 + BACOVA_04706 0.83 -0.1
73,549 - BACOVA_04706 0.83 -0.7
73,552 - BACOVA_04706 0.84 -0.4
73,700 + -0.7
73,701 - +0.7
73,701 - -0.1
73,701 - -0.9
73,729 + +0.9
73,729 + -1.1
73,741 + -1.2
73,742 - -0.1
73,748 - -1.3
73,748 - +0.4
73,764 - +0.3
73,779 + -0.9
73,779 + -1.9
73,816 + -2.3
73,816 + +0.3
73,817 - +0.4
73,817 - -0.1
73,832 - -0.1
73,832 - +0.3
73,832 - +2.7
73,832 - +2.2
73,842 + -0.1
73,868 - -1.3
73,881 + -0.7
73,881 + -1.9
73,882 - -1.5
73,882 - +0.5
73,901 + +0.4
73,932 + +0.2
73,956 - -2.5
74,037 + BACOVA_04707 0.11 -1.4
74,038 - BACOVA_04707 0.11 +1.3
74,038 - BACOVA_04707 0.11 -0.2
74,050 - BACOVA_04707 0.11 -1.1
74,052 - BACOVA_04707 0.11 -0.8
74,052 - BACOVA_04707 0.11 -0.3
74,141 - BACOVA_04707 0.16 +0.2
74,150 + BACOVA_04707 0.16 -1.0
74,159 + BACOVA_04707 0.16 +1.5
74,163 + BACOVA_04707 0.17 -1.1
74,163 + BACOVA_04707 0.17 +0.0
74,164 - BACOVA_04707 0.17 -0.9
74,164 - BACOVA_04707 0.17 +0.7
74,164 - BACOVA_04707 0.17 -1.1
74,244 + BACOVA_04707 0.20 -0.3
74,279 + BACOVA_04707 0.22 -2.6
74,295 - BACOVA_04707 0.23 -2.3
74,369 + BACOVA_04707 0.26 +0.9
74,369 + BACOVA_04707 0.26 +0.7
74,369 + BACOVA_04707 0.26 +0.7
74,370 - BACOVA_04707 0.26 -1.1
74,370 - BACOVA_04707 0.26 -1.1
74,371 + BACOVA_04707 0.26 +1.9
74,393 + BACOVA_04707 0.28 -2.3
74,446 - BACOVA_04707 0.30 +0.9
74,487 + BACOVA_04707 0.32 -3.0
74,531 - BACOVA_04707 0.34 -0.3
74,534 + BACOVA_04707 0.34 +0.6
74,552 + BACOVA_04707 0.35 +0.5
74,554 + BACOVA_04707 0.35 -3.1
74,555 - BACOVA_04707 0.35 +0.2
74,622 + BACOVA_04707 0.38 +1.2
74,622 + BACOVA_04707 0.38 -1.9
74,623 - BACOVA_04707 0.38 +0.9
74,644 - BACOVA_04707 0.39 -2.4
74,649 - BACOVA_04707 0.40 -1.4
74,666 + BACOVA_04707 0.41 -0.4
74,674 - BACOVA_04707 0.41 -0.2
74,676 - BACOVA_04707 0.41 +0.2
74,691 + BACOVA_04707 0.42 +0.9
74,691 + BACOVA_04707 0.42 -1.4
74,727 + BACOVA_04707 0.43 -0.3

Or see this region's nucleotide sequence