Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_00591

Experiment: Peptone 2.5 mg/mL (C) complex media

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_00590 and BACOVA_00591 are separated by 131 nucleotidesBACOVA_00591 and BACOVA_00592 are separated by 120 nucleotides BACOVA_00590: BACOVA_00590 - bifunctional protein FolC, at 26,071 to 27,561 _00590 BACOVA_00591: BACOVA_00591 - PhoH family protein, at 27,693 to 29,018 _00591 BACOVA_00592: BACOVA_00592 - dihydroorotate dehydrogenase 2, at 29,139 to 30,116 _00592 Position (kb) 27 28 29 30Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 27.618 kb on - strandat 27.679 kb on - strandat 27.731 kb on + strandat 27.745 kb on - strandat 27.780 kb on + strandat 27.781 kb on - strandat 27.812 kb on + strandat 27.989 kb on + strand, within BACOVA_00591at 28.045 kb on - strand, within BACOVA_00591at 28.062 kb on - strand, within BACOVA_00591at 28.062 kb on - strand, within BACOVA_00591at 28.129 kb on - strand, within BACOVA_00591at 28.130 kb on + strand, within BACOVA_00591at 28.139 kb on + strand, within BACOVA_00591at 28.139 kb on + strand, within BACOVA_00591at 28.147 kb on + strand, within BACOVA_00591at 28.148 kb on - strand, within BACOVA_00591at 28.153 kb on + strand, within BACOVA_00591at 28.154 kb on - strand, within BACOVA_00591at 28.172 kb on + strand, within BACOVA_00591at 28.172 kb on + strand, within BACOVA_00591at 28.193 kb on - strand, within BACOVA_00591at 28.193 kb on - strand, within BACOVA_00591at 28.215 kb on - strand, within BACOVA_00591at 28.219 kb on - strand, within BACOVA_00591at 28.219 kb on - strand, within BACOVA_00591at 28.219 kb on - strand, within BACOVA_00591at 28.259 kb on + strand, within BACOVA_00591at 28.316 kb on - strand, within BACOVA_00591at 28.327 kb on - strand, within BACOVA_00591at 28.327 kb on - strand, within BACOVA_00591at 28.346 kb on + strand, within BACOVA_00591at 28.347 kb on - strand, within BACOVA_00591at 28.374 kb on + strand, within BACOVA_00591at 28.475 kb on + strand, within BACOVA_00591at 28.476 kb on - strand, within BACOVA_00591at 28.521 kb on + strand, within BACOVA_00591at 28.606 kb on + strand, within BACOVA_00591at 28.606 kb on + strand, within BACOVA_00591at 28.606 kb on + strand, within BACOVA_00591at 28.607 kb on - strand, within BACOVA_00591at 28.615 kb on - strand, within BACOVA_00591at 28.616 kb on + strand, within BACOVA_00591at 28.697 kb on + strand, within BACOVA_00591at 28.697 kb on - strand, within BACOVA_00591at 28.751 kb on + strand, within BACOVA_00591at 28.768 kb on - strand, within BACOVA_00591at 28.810 kb on + strand, within BACOVA_00591at 28.811 kb on - strand, within BACOVA_00591at 28.866 kb on - strand, within BACOVA_00591at 28.887 kb on + strandat 28.887 kb on + strandat 28.888 kb on - strandat 28.888 kb on - strandat 28.915 kb on + strandat 28.916 kb on - strandat 28.918 kb on - strandat 28.919 kb on + strandat 28.919 kb on + strandat 28.919 kb on + strandat 28.919 kb on + strandat 28.920 kb on - strandat 28.920 kb on - strandat 28.931 kb on + strandat 28.932 kb on - strandat 28.946 kb on + strandat 28.946 kb on + strandat 29.015 kb on - strandat 29.033 kb on - strandat 29.046 kb on + strandat 29.130 kb on - strandat 29.174 kb on + strandat 29.175 kb on - strandat 29.175 kb on - strandat 29.207 kb on + strandat 29.208 kb on - strandat 29.211 kb on - strandat 29.211 kb on - strandat 29.236 kb on - strandat 29.238 kb on - strand, within BACOVA_00592at 29.306 kb on + strand, within BACOVA_00592at 29.314 kb on + strand, within BACOVA_00592at 29.324 kb on + strand, within BACOVA_00592at 29.404 kb on + strand, within BACOVA_00592at 29.405 kb on - strand, within BACOVA_00592at 29.418 kb on + strand, within BACOVA_00592at 29.418 kb on + strand, within BACOVA_00592at 29.419 kb on - strand, within BACOVA_00592at 29.422 kb on - strand, within BACOVA_00592at 29.495 kb on + strand, within BACOVA_00592at 29.496 kb on - strand, within BACOVA_00592at 29.573 kb on - strand, within BACOVA_00592at 29.634 kb on + strand, within BACOVA_00592at 29.634 kb on + strand, within BACOVA_00592at 29.635 kb on - strand, within BACOVA_00592at 29.695 kb on + strand, within BACOVA_00592at 29.695 kb on + strand, within BACOVA_00592at 29.695 kb on + strand, within BACOVA_00592at 29.695 kb on + strand, within BACOVA_00592at 29.695 kb on + strand, within BACOVA_00592at 29.696 kb on - strand, within BACOVA_00592at 29.700 kb on - strand, within BACOVA_00592at 29.700 kb on - strand, within BACOVA_00592at 29.702 kb on - strand, within BACOVA_00592at 29.801 kb on - strand, within BACOVA_00592at 29.801 kb on - strand, within BACOVA_00592at 29.823 kb on - strand, within BACOVA_00592at 29.836 kb on - strand, within BACOVA_00592at 29.836 kb on - strand, within BACOVA_00592at 29.843 kb on + strand, within BACOVA_00592at 29.843 kb on + strand, within BACOVA_00592at 29.857 kb on - strand, within BACOVA_00592at 29.891 kb on + strand, within BACOVA_00592at 29.892 kb on - strand, within BACOVA_00592at 29.894 kb on - strand, within BACOVA_00592at 29.894 kb on - strand, within BACOVA_00592at 29.894 kb on - strand, within BACOVA_00592at 29.894 kb on - strand, within BACOVA_00592

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Per-strain Table

Position Strand Gene LocusTag Fraction Peptone 2.5 mg/mL (C) complex media
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27,618 - -1.0
27,679 - -0.7
27,731 + +0.6
27,745 - +1.4
27,780 + -1.1
27,781 - -0.1
27,812 + -0.2
27,989 + BACOVA_00591 0.22 -1.7
28,045 - BACOVA_00591 0.27 -0.6
28,062 - BACOVA_00591 0.28 -0.5
28,062 - BACOVA_00591 0.28 +0.8
28,129 - BACOVA_00591 0.33 -1.5
28,130 + BACOVA_00591 0.33 -1.2
28,139 + BACOVA_00591 0.34 +0.4
28,139 + BACOVA_00591 0.34 -1.2
28,147 + BACOVA_00591 0.34 +0.2
28,148 - BACOVA_00591 0.34 +0.4
28,153 + BACOVA_00591 0.35 -0.6
28,154 - BACOVA_00591 0.35 -0.8
28,172 + BACOVA_00591 0.36 -1.0
28,172 + BACOVA_00591 0.36 +1.4
28,193 - BACOVA_00591 0.38 -0.7
28,193 - BACOVA_00591 0.38 +0.3
28,215 - BACOVA_00591 0.39 +1.1
28,219 - BACOVA_00591 0.40 +0.0
28,219 - BACOVA_00591 0.40 -1.2
28,219 - BACOVA_00591 0.40 -0.6
28,259 + BACOVA_00591 0.43 +1.3
28,316 - BACOVA_00591 0.47 -1.2
28,327 - BACOVA_00591 0.48 -0.7
28,327 - BACOVA_00591 0.48 -1.0
28,346 + BACOVA_00591 0.49 +0.4
28,347 - BACOVA_00591 0.49 -0.2
28,374 + BACOVA_00591 0.51 -0.4
28,475 + BACOVA_00591 0.59 -0.4
28,476 - BACOVA_00591 0.59 -0.2
28,521 + BACOVA_00591 0.62 -0.1
28,606 + BACOVA_00591 0.69 +2.2
28,606 + BACOVA_00591 0.69 -0.7
28,606 + BACOVA_00591 0.69 +0.6
28,607 - BACOVA_00591 0.69 +0.5
28,615 - BACOVA_00591 0.70 -1.3
28,616 + BACOVA_00591 0.70 +1.3
28,697 + BACOVA_00591 0.76 +0.5
28,697 - BACOVA_00591 0.76 -2.1
28,751 + BACOVA_00591 0.80 +0.3
28,768 - BACOVA_00591 0.81 -0.7
28,810 + BACOVA_00591 0.84 -0.7
28,811 - BACOVA_00591 0.84 -2.0
28,866 - BACOVA_00591 0.88 -0.4
28,887 + +0.5
28,887 + -0.4
28,888 - -1.2
28,888 - -0.6
28,915 + -0.6
28,916 - +0.2
28,918 - -0.3
28,919 + -0.5
28,919 + -0.5
28,919 + -1.2
28,919 + -1.2
28,920 - -0.6
28,920 - -0.0
28,931 + +1.0
28,932 - -0.7
28,946 + +0.3
28,946 + -0.8
29,015 - -0.1
29,033 - +0.7
29,046 + +1.4
29,130 - +1.3
29,174 + -0.6
29,175 - -0.5
29,175 - -0.2
29,207 + -0.6
29,208 - -1.7
29,211 - +0.1
29,211 - -3.3
29,236 - -0.2
29,238 - BACOVA_00592 0.10 +0.8
29,306 + BACOVA_00592 0.17 -0.8
29,314 + BACOVA_00592 0.18 -0.3
29,324 + BACOVA_00592 0.19 -0.2
29,404 + BACOVA_00592 0.27 -0.2
29,405 - BACOVA_00592 0.27 -0.6
29,418 + BACOVA_00592 0.29 +1.0
29,418 + BACOVA_00592 0.29 +1.0
29,419 - BACOVA_00592 0.29 +0.5
29,422 - BACOVA_00592 0.29 -0.0
29,495 + BACOVA_00592 0.36 +0.3
29,496 - BACOVA_00592 0.37 +0.6
29,573 - BACOVA_00592 0.44 +0.0
29,634 + BACOVA_00592 0.51 +0.9
29,634 + BACOVA_00592 0.51 -0.5
29,635 - BACOVA_00592 0.51 -2.3
29,695 + BACOVA_00592 0.57 -1.0
29,695 + BACOVA_00592 0.57 +0.0
29,695 + BACOVA_00592 0.57 +0.2
29,695 + BACOVA_00592 0.57 -0.2
29,695 + BACOVA_00592 0.57 -1.7
29,696 - BACOVA_00592 0.57 -0.7
29,700 - BACOVA_00592 0.57 -1.2
29,700 - BACOVA_00592 0.57 +1.8
29,702 - BACOVA_00592 0.58 +1.1
29,801 - BACOVA_00592 0.68 -0.5
29,801 - BACOVA_00592 0.68 +0.6
29,823 - BACOVA_00592 0.70 +1.0
29,836 - BACOVA_00592 0.71 -1.1
29,836 - BACOVA_00592 0.71 -0.8
29,843 + BACOVA_00592 0.72 +0.8
29,843 + BACOVA_00592 0.72 +0.8
29,857 - BACOVA_00592 0.73 -1.3
29,891 + BACOVA_00592 0.77 -0.6
29,892 - BACOVA_00592 0.77 +0.7
29,894 - BACOVA_00592 0.77 +0.8
29,894 - BACOVA_00592 0.77 -2.2
29,894 - BACOVA_00592 0.77 -0.0
29,894 - BACOVA_00592 0.77 -1.5

Or see this region's nucleotide sequence