Experiment: Yeast Extract 2.5 mg/mL (C) complex media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_05307 and BACOVA_05308 are separated by 120 nucleotides BACOVA_05308 and BACOVA_05309 are separated by 115 nucleotides BACOVA_05309 and BACOVA_05310 are separated by 236 nucleotides BACOVA_05310 and BACOVA_05311 are separated by 31 nucleotides
BACOVA_05307: BACOVA_05307 - hypothetical protein, at 796,998 to 797,525
_05307
BACOVA_05308: BACOVA_05308 - MaoC-like protein, at 797,646 to 798,110
_05308
BACOVA_05309: BACOVA_05309 - linear amide C-N hydrolase, choloylglycine hydrolase family protein, at 798,226 to 799,170
_05309
BACOVA_05310: BACOVA_05310 - MarC family integral membrane protein, at 799,407 to 800,039
_05310
BACOVA_05311: BACOVA_05311 - hypothetical protein, at 800,071 to 800,595
_05311
Position (kb) 798
799
800 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 797.277 kb on + strand, within BACOVA_05307 at 797.300 kb on + strand, within BACOVA_05307 at 797.300 kb on + strand, within BACOVA_05307 at 797.307 kb on + strand, within BACOVA_05307 at 797.308 kb on - strand, within BACOVA_05307 at 797.316 kb on + strand, within BACOVA_05307 at 797.317 kb on - strand, within BACOVA_05307 at 797.403 kb on - strand, within BACOVA_05307 at 797.482 kb on - strand at 797.534 kb on + strand at 797.535 kb on - strand at 797.538 kb on + strand at 797.538 kb on + strand at 797.556 kb on + strand at 797.576 kb on + strand at 797.577 kb on - strand at 797.617 kb on - strand at 797.617 kb on - strand at 797.620 kb on + strand at 797.621 kb on - strand at 797.692 kb on + strand at 797.692 kb on + strand at 797.704 kb on + strand, within BACOVA_05308 at 797.742 kb on - strand, within BACOVA_05308 at 797.788 kb on + strand, within BACOVA_05308 at 797.789 kb on - strand, within BACOVA_05308 at 797.809 kb on + strand, within BACOVA_05308 at 797.810 kb on - strand, within BACOVA_05308 at 797.813 kb on + strand, within BACOVA_05308 at 797.826 kb on - strand, within BACOVA_05308 at 797.826 kb on - strand, within BACOVA_05308 at 797.869 kb on - strand, within BACOVA_05308 at 797.894 kb on - strand, within BACOVA_05308 at 797.897 kb on + strand, within BACOVA_05308 at 797.898 kb on - strand, within BACOVA_05308 at 797.919 kb on + strand, within BACOVA_05308 at 797.920 kb on - strand, within BACOVA_05308 at 797.920 kb on - strand, within BACOVA_05308 at 797.954 kb on - strand, within BACOVA_05308 at 797.984 kb on + strand, within BACOVA_05308 at 798.088 kb on + strand at 798.089 kb on - strand at 798.096 kb on + strand at 798.159 kb on - strand at 798.313 kb on - strand at 798.316 kb on + strand at 798.316 kb on + strand at 798.317 kb on - strand at 798.375 kb on + strand, within BACOVA_05309 at 798.375 kb on + strand, within BACOVA_05309 at 798.379 kb on - strand, within BACOVA_05309 at 798.405 kb on - strand, within BACOVA_05309 at 798.482 kb on + strand, within BACOVA_05309 at 798.496 kb on - strand, within BACOVA_05309 at 798.514 kb on + strand, within BACOVA_05309 at 798.529 kb on + strand, within BACOVA_05309 at 798.529 kb on + strand, within BACOVA_05309 at 798.542 kb on + strand, within BACOVA_05309 at 798.671 kb on + strand, within BACOVA_05309 at 798.671 kb on + strand, within BACOVA_05309 at 798.671 kb on + strand, within BACOVA_05309 at 798.671 kb on + strand, within BACOVA_05309 at 798.735 kb on + strand, within BACOVA_05309 at 798.736 kb on - strand, within BACOVA_05309 at 798.736 kb on - strand, within BACOVA_05309 at 798.737 kb on + strand, within BACOVA_05309 at 798.826 kb on + strand, within BACOVA_05309 at 798.891 kb on + strand, within BACOVA_05309 at 798.892 kb on - strand, within BACOVA_05309 at 798.892 kb on - strand, within BACOVA_05309 at 798.893 kb on + strand, within BACOVA_05309 at 798.894 kb on - strand, within BACOVA_05309 at 798.894 kb on - strand, within BACOVA_05309 at 798.968 kb on - strand, within BACOVA_05309 at 799.046 kb on + strand, within BACOVA_05309 at 799.111 kb on + strand at 799.111 kb on + strand at 799.112 kb on - strand at 799.150 kb on - strand at 799.220 kb on - strand at 799.234 kb on + strand at 799.235 kb on - strand at 799.235 kb on - strand at 799.236 kb on + strand at 799.236 kb on + strand at 799.237 kb on - strand at 799.254 kb on + strand at 799.255 kb on - strand at 799.314 kb on + strand at 799.315 kb on - strand at 799.325 kb on + strand at 799.326 kb on - strand at 799.330 kb on - strand at 799.343 kb on - strand at 799.343 kb on - strand at 799.343 kb on - strand at 799.361 kb on + strand at 799.361 kb on + strand at 799.362 kb on - strand at 799.362 kb on - strand at 799.364 kb on + strand at 799.373 kb on - strand at 799.373 kb on - strand at 799.426 kb on + strand at 799.524 kb on - strand, within BACOVA_05310 at 799.626 kb on - strand, within BACOVA_05310 at 799.667 kb on + strand, within BACOVA_05310 at 799.749 kb on - strand, within BACOVA_05310 at 799.770 kb on - strand, within BACOVA_05310 at 799.778 kb on + strand, within BACOVA_05310 at 799.860 kb on - strand, within BACOVA_05310 at 799.862 kb on + strand, within BACOVA_05310 at 799.869 kb on - strand, within BACOVA_05310 at 799.888 kb on + strand, within BACOVA_05310 at 799.953 kb on - strand, within BACOVA_05310 at 800.006 kb on + strand at 800.006 kb on + strand at 800.006 kb on + strand at 800.006 kb on + strand at 800.006 kb on + strand at 800.007 kb on - strand at 800.007 kb on - strand at 800.007 kb on - strand at 800.007 kb on - strand at 800.007 kb on - strand at 800.007 kb on - strand at 800.007 kb on - strand at 800.008 kb on + strand at 800.018 kb on - strand at 800.033 kb on - strand at 800.038 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Yeast Extract 2.5 mg/mL (C) complex media remove 797,277 + BACOVA_05307 0.53 +3.2 797,300 + BACOVA_05307 0.57 +0.3 797,300 + BACOVA_05307 0.57 -0.7 797,307 + BACOVA_05307 0.59 +1.1 797,308 - BACOVA_05307 0.59 -0.1 797,316 + BACOVA_05307 0.60 +0.6 797,317 - BACOVA_05307 0.60 +0.1 797,403 - BACOVA_05307 0.77 +0.1 797,482 - +1.4 797,534 + +0.7 797,535 - -1.7 797,538 + +1.0 797,538 + -1.1 797,556 + +0.2 797,576 + +0.5 797,577 - +0.4 797,617 - -0.1 797,617 - -0.5 797,620 + -2.3 797,621 - -0.2 797,692 + -0.1 797,692 + -0.3 797,704 + BACOVA_05308 0.12 -0.3 797,742 - BACOVA_05308 0.21 +0.0 797,788 + BACOVA_05308 0.31 -2.5 797,789 - BACOVA_05308 0.31 +0.3 797,809 + BACOVA_05308 0.35 -0.1 797,810 - BACOVA_05308 0.35 +2.2 797,813 + BACOVA_05308 0.36 -0.6 797,826 - BACOVA_05308 0.39 +0.4 797,826 - BACOVA_05308 0.39 -1.2 797,869 - BACOVA_05308 0.48 +0.9 797,894 - BACOVA_05308 0.53 +0.4 797,897 + BACOVA_05308 0.54 -1.4 797,898 - BACOVA_05308 0.54 -1.1 797,919 + BACOVA_05308 0.59 -1.3 797,920 - BACOVA_05308 0.59 +0.9 797,920 - BACOVA_05308 0.59 -0.9 797,954 - BACOVA_05308 0.66 +0.5 797,984 + BACOVA_05308 0.73 +1.3 798,088 + +0.4 798,089 - +0.7 798,096 + -0.6 798,159 - -0.4 798,313 - +0.9 798,316 + -0.4 798,316 + -0.6 798,317 - +0.4 798,375 + BACOVA_05309 0.16 -0.6 798,375 + BACOVA_05309 0.16 -0.3 798,379 - BACOVA_05309 0.16 -0.6 798,405 - BACOVA_05309 0.19 -0.5 798,482 + BACOVA_05309 0.27 -1.9 798,496 - BACOVA_05309 0.29 -0.5 798,514 + BACOVA_05309 0.30 -1.6 798,529 + BACOVA_05309 0.32 -0.2 798,529 + BACOVA_05309 0.32 +0.6 798,542 + BACOVA_05309 0.33 +0.6 798,671 + BACOVA_05309 0.47 +0.9 798,671 + BACOVA_05309 0.47 -0.1 798,671 + BACOVA_05309 0.47 -0.2 798,671 + BACOVA_05309 0.47 -0.2 798,735 + BACOVA_05309 0.54 -0.3 798,736 - BACOVA_05309 0.54 +0.9 798,736 - BACOVA_05309 0.54 +0.9 798,737 + BACOVA_05309 0.54 -0.1 798,826 + BACOVA_05309 0.63 -0.5 798,891 + BACOVA_05309 0.70 -1.5 798,892 - BACOVA_05309 0.70 +0.9 798,892 - BACOVA_05309 0.70 -0.6 798,893 + BACOVA_05309 0.71 +0.1 798,894 - BACOVA_05309 0.71 -0.2 798,894 - BACOVA_05309 0.71 -0.7 798,968 - BACOVA_05309 0.79 +0.2 799,046 + BACOVA_05309 0.87 +0.3 799,111 + -0.1 799,111 + -0.2 799,112 - -0.1 799,150 - +0.2 799,220 - -0.6 799,234 + -0.7 799,235 - -1.0 799,235 - +1.0 799,236 + +0.1 799,236 + -0.4 799,237 - +0.2 799,254 + +0.1 799,255 - +0.4 799,314 + +0.0 799,315 - -0.3 799,325 + +0.5 799,326 - -0.1 799,330 - -0.1 799,343 - +0.2 799,343 - +0.0 799,343 - +0.7 799,361 + -0.3 799,361 + -0.3 799,362 - +0.3 799,362 - +0.6 799,364 + +0.6 799,373 - +0.1 799,373 - +0.7 799,426 + +1.3 799,524 - BACOVA_05310 0.18 +0.9 799,626 - BACOVA_05310 0.35 +0.4 799,667 + BACOVA_05310 0.41 -1.3 799,749 - BACOVA_05310 0.54 -2.1 799,770 - BACOVA_05310 0.57 -0.4 799,778 + BACOVA_05310 0.59 -0.2 799,860 - BACOVA_05310 0.72 +0.6 799,862 + BACOVA_05310 0.72 +1.3 799,869 - BACOVA_05310 0.73 +0.4 799,888 + BACOVA_05310 0.76 -0.0 799,953 - BACOVA_05310 0.86 +0.2 800,006 + -0.4 800,006 + +1.3 800,006 + +0.3 800,006 + +0.2 800,006 + -1.2 800,007 - -0.3 800,007 - -1.0 800,007 - +2.7 800,007 - +0.4 800,007 - +0.3 800,007 - -0.7 800,007 - +2.2 800,008 + +0.0 800,018 - -1.1 800,033 - +0.3 800,038 - +0.5
Or see this region's nucleotide sequence