Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_00609

Experiment: Yeast Extract 2.5 mg/mL (C) complex media

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_00608 and BACOVA_00609 are separated by 51 nucleotidesBACOVA_00609 and BACOVA_00610 are separated by 441 nucleotidesBACOVA_00610 and BACOVA_00612 are separated by 26 nucleotides BACOVA_00608: BACOVA_00608 - WD40-like protein, at 44,192 to 47,476 _00608 BACOVA_00609: BACOVA_00609 - YihY family protein, at 47,528 to 48,847 _00609 BACOVA_00610: BACOVA_00610 - hypothetical protein, at 49,289 to 49,417 _00610 BACOVA_00612: BACOVA_00612 - NlpC/P60 family protein, at 49,444 to 50,424 _00612 Position (kb) 47 48 49Strain fitness (log2 ratio) -2 -1 0 1 2at 46.558 kb on + strand, within BACOVA_00608at 46.558 kb on + strand, within BACOVA_00608at 46.559 kb on - strand, within BACOVA_00608at 46.589 kb on + strand, within BACOVA_00608at 46.589 kb on + strand, within BACOVA_00608at 46.590 kb on - strand, within BACOVA_00608at 46.591 kb on + strand, within BACOVA_00608at 46.591 kb on + strand, within BACOVA_00608at 46.592 kb on - strand, within BACOVA_00608at 46.621 kb on + strand, within BACOVA_00608at 46.627 kb on + strand, within BACOVA_00608at 46.629 kb on + strand, within BACOVA_00608at 46.644 kb on + strand, within BACOVA_00608at 46.741 kb on + strand, within BACOVA_00608at 46.751 kb on + strand, within BACOVA_00608at 46.752 kb on - strand, within BACOVA_00608at 46.778 kb on + strand, within BACOVA_00608at 46.782 kb on + strand, within BACOVA_00608at 46.783 kb on - strand, within BACOVA_00608at 46.786 kb on - strand, within BACOVA_00608at 46.786 kb on - strand, within BACOVA_00608at 46.878 kb on + strand, within BACOVA_00608at 46.878 kb on + strand, within BACOVA_00608at 46.878 kb on + strand, within BACOVA_00608at 46.878 kb on + strand, within BACOVA_00608at 46.879 kb on - strand, within BACOVA_00608at 46.900 kb on + strand, within BACOVA_00608at 46.901 kb on - strand, within BACOVA_00608at 46.901 kb on - strand, within BACOVA_00608at 46.926 kb on + strand, within BACOVA_00608at 46.927 kb on - strand, within BACOVA_00608at 46.927 kb on - strand, within BACOVA_00608at 46.953 kb on + strand, within BACOVA_00608at 46.954 kb on - strand, within BACOVA_00608at 46.972 kb on + strand, within BACOVA_00608at 46.973 kb on - strand, within BACOVA_00608at 47.044 kb on - strand, within BACOVA_00608at 47.251 kb on + strandat 47.338 kb on - strandat 47.338 kb on - strandat 47.405 kb on + strandat 47.439 kb on - strandat 47.459 kb on + strandat 47.460 kb on - strandat 47.495 kb on - strandat 47.529 kb on + strandat 47.546 kb on + strandat 47.547 kb on - strandat 47.551 kb on + strandat 47.552 kb on - strandat 47.565 kb on + strandat 47.568 kb on + strandat 47.568 kb on + strandat 47.649 kb on + strandat 47.771 kb on + strand, within BACOVA_00609at 47.839 kb on + strand, within BACOVA_00609at 47.900 kb on - strand, within BACOVA_00609at 47.973 kb on + strand, within BACOVA_00609at 48.032 kb on + strand, within BACOVA_00609at 48.057 kb on + strand, within BACOVA_00609at 48.069 kb on + strand, within BACOVA_00609at 48.069 kb on + strand, within BACOVA_00609at 48.140 kb on - strand, within BACOVA_00609at 48.192 kb on + strand, within BACOVA_00609at 48.192 kb on + strand, within BACOVA_00609at 48.233 kb on - strand, within BACOVA_00609at 48.304 kb on + strand, within BACOVA_00609at 48.367 kb on - strand, within BACOVA_00609at 48.373 kb on + strand, within BACOVA_00609at 48.384 kb on + strand, within BACOVA_00609at 48.436 kb on + strand, within BACOVA_00609at 48.437 kb on - strand, within BACOVA_00609at 48.440 kb on - strand, within BACOVA_00609at 48.473 kb on + strand, within BACOVA_00609at 48.474 kb on - strand, within BACOVA_00609at 48.496 kb on + strand, within BACOVA_00609at 48.496 kb on + strand, within BACOVA_00609at 48.560 kb on + strand, within BACOVA_00609at 48.671 kb on - strand, within BACOVA_00609at 48.672 kb on + strand, within BACOVA_00609at 48.672 kb on + strand, within BACOVA_00609at 48.673 kb on - strand, within BACOVA_00609at 48.677 kb on - strand, within BACOVA_00609at 48.677 kb on - strand, within BACOVA_00609at 48.725 kb on - strandat 48.811 kb on + strandat 48.825 kb on - strandat 48.884 kb on - strandat 48.884 kb on - strandat 49.349 kb on - strand, within BACOVA_00610at 49.402 kb on + strand, within BACOVA_00610at 49.403 kb on - strand, within BACOVA_00610at 49.424 kb on + strandat 49.443 kb on - strandat 49.494 kb on + strandat 49.514 kb on + strandat 49.548 kb on - strand, within BACOVA_00612at 49.551 kb on - strand, within BACOVA_00612at 49.554 kb on + strand, within BACOVA_00612at 49.555 kb on - strand, within BACOVA_00612at 49.645 kb on + strand, within BACOVA_00612at 49.645 kb on + strand, within BACOVA_00612at 49.664 kb on + strand, within BACOVA_00612at 49.682 kb on - strand, within BACOVA_00612at 49.732 kb on + strand, within BACOVA_00612at 49.732 kb on + strand, within BACOVA_00612at 49.768 kb on - strand, within BACOVA_00612at 49.789 kb on + strand, within BACOVA_00612at 49.790 kb on - strand, within BACOVA_00612

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Per-strain Table

Position Strand Gene LocusTag Fraction Yeast Extract 2.5 mg/mL (C) complex media
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46,558 + BACOVA_00608 0.72 +0.6
46,558 + BACOVA_00608 0.72 +0.4
46,559 - BACOVA_00608 0.72 +0.0
46,589 + BACOVA_00608 0.73 -1.1
46,589 + BACOVA_00608 0.73 +0.4
46,590 - BACOVA_00608 0.73 +0.3
46,591 + BACOVA_00608 0.73 -0.3
46,591 + BACOVA_00608 0.73 +0.4
46,592 - BACOVA_00608 0.73 -0.4
46,621 + BACOVA_00608 0.74 -0.8
46,627 + BACOVA_00608 0.74 -0.2
46,629 + BACOVA_00608 0.74 -1.7
46,644 + BACOVA_00608 0.75 -0.1
46,741 + BACOVA_00608 0.78 +0.4
46,751 + BACOVA_00608 0.78 -1.2
46,752 - BACOVA_00608 0.78 -1.3
46,778 + BACOVA_00608 0.79 -1.0
46,782 + BACOVA_00608 0.79 +1.1
46,783 - BACOVA_00608 0.79 -0.5
46,786 - BACOVA_00608 0.79 +0.3
46,786 - BACOVA_00608 0.79 -0.5
46,878 + BACOVA_00608 0.82 -0.8
46,878 + BACOVA_00608 0.82 -0.6
46,878 + BACOVA_00608 0.82 +0.2
46,878 + BACOVA_00608 0.82 -0.4
46,879 - BACOVA_00608 0.82 +0.2
46,900 + BACOVA_00608 0.82 +0.6
46,901 - BACOVA_00608 0.82 +0.4
46,901 - BACOVA_00608 0.82 -1.8
46,926 + BACOVA_00608 0.83 -0.9
46,927 - BACOVA_00608 0.83 +1.0
46,927 - BACOVA_00608 0.83 -0.6
46,953 + BACOVA_00608 0.84 +1.0
46,954 - BACOVA_00608 0.84 -2.4
46,972 + BACOVA_00608 0.85 -0.0
46,973 - BACOVA_00608 0.85 +2.0
47,044 - BACOVA_00608 0.87 -0.4
47,251 + -0.6
47,338 - +0.2
47,338 - +0.3
47,405 + +0.1
47,439 - +1.1
47,459 + +0.6
47,460 - -0.2
47,495 - +1.1
47,529 + +0.8
47,546 + +0.2
47,547 - +0.4
47,551 + +1.2
47,552 - -1.3
47,565 + +0.5
47,568 + +0.0
47,568 + -0.1
47,649 + -0.0
47,771 + BACOVA_00609 0.18 +0.8
47,839 + BACOVA_00609 0.24 +0.8
47,900 - BACOVA_00609 0.28 -0.2
47,973 + BACOVA_00609 0.34 -0.8
48,032 + BACOVA_00609 0.38 +1.0
48,057 + BACOVA_00609 0.40 +1.8
48,069 + BACOVA_00609 0.41 +0.0
48,069 + BACOVA_00609 0.41 -0.2
48,140 - BACOVA_00609 0.46 +0.4
48,192 + BACOVA_00609 0.50 +0.1
48,192 + BACOVA_00609 0.50 -1.4
48,233 - BACOVA_00609 0.53 -0.4
48,304 + BACOVA_00609 0.59 +0.1
48,367 - BACOVA_00609 0.64 -0.0
48,373 + BACOVA_00609 0.64 -0.1
48,384 + BACOVA_00609 0.65 +0.6
48,436 + BACOVA_00609 0.69 -0.8
48,437 - BACOVA_00609 0.69 +0.2
48,440 - BACOVA_00609 0.69 +2.0
48,473 + BACOVA_00609 0.72 -0.0
48,474 - BACOVA_00609 0.72 -0.1
48,496 + BACOVA_00609 0.73 +1.5
48,496 + BACOVA_00609 0.73 -2.0
48,560 + BACOVA_00609 0.78 +0.1
48,671 - BACOVA_00609 0.87 -0.8
48,672 + BACOVA_00609 0.87 +1.3
48,672 + BACOVA_00609 0.87 -1.2
48,673 - BACOVA_00609 0.87 +0.8
48,677 - BACOVA_00609 0.87 -1.9
48,677 - BACOVA_00609 0.87 +0.8
48,725 - -0.8
48,811 + +1.6
48,825 - -2.7
48,884 - +1.2
48,884 - -0.1
49,349 - BACOVA_00610 0.47 -1.0
49,402 + BACOVA_00610 0.88 -1.1
49,403 - BACOVA_00610 0.88 +0.9
49,424 + -1.5
49,443 - +1.4
49,494 + -0.3
49,514 + +1.4
49,548 - BACOVA_00612 0.11 +0.4
49,551 - BACOVA_00612 0.11 -1.1
49,554 + BACOVA_00612 0.11 -0.2
49,555 - BACOVA_00612 0.11 -0.5
49,645 + BACOVA_00612 0.20 +0.5
49,645 + BACOVA_00612 0.20 +0.8
49,664 + BACOVA_00612 0.22 -1.2
49,682 - BACOVA_00612 0.24 +0.4
49,732 + BACOVA_00612 0.29 +0.8
49,732 + BACOVA_00612 0.29 +0.2
49,768 - BACOVA_00612 0.33 +0.1
49,789 + BACOVA_00612 0.35 -0.0
49,790 - BACOVA_00612 0.35 +0.6

Or see this region's nucleotide sequence