Experiment: Brucella 1 x (C) complex media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_04770 and BACOVA_04771 overlap by 17 nucleotides BACOVA_04771 and BACOVA_04772 overlap by 14 nucleotides BACOVA_04772 and BACOVA_04773 are separated by 12 nucleotides BACOVA_04773 and BACOVA_04774 are separated by 3 nucleotides BACOVA_04774 and BACOVA_04775 are separated by 41 nucleotides
BACOVA_04770: BACOVA_04770 - conjugative transposon TraM protein, at 123,758 to 124,933
_04770
BACOVA_04771: BACOVA_04771 - hypothetical protein, at 124,917 to 125,423
_04771
BACOVA_04772: BACOVA_04772 - hypothetical protein, at 125,410 to 125,790
_04772
BACOVA_04773: BACOVA_04773 - conjugative transposon TraK protein, at 125,803 to 126,417
_04773
BACOVA_04774: BACOVA_04774 - hypothetical protein, at 126,421 to 126,816
_04774
BACOVA_04775: BACOVA_04775 - hypothetical protein, at 126,858 to 127,991
_04775
Position (kb) 125
126
127 Strain fitness (log2 ratio) -2
-1
0
1 at 124.821 kb on + strand at 124.821 kb on + strand at 124.845 kb on + strand at 124.866 kb on + strand at 124.918 kb on + strand at 124.933 kb on + strand at 125.214 kb on + strand, within BACOVA_04771 at 125.393 kb on + strand at 125.411 kb on + strand at 125.558 kb on + strand, within BACOVA_04772 at 125.784 kb on + strand at 125.807 kb on + strand at 125.899 kb on + strand, within BACOVA_04773 at 125.899 kb on + strand, within BACOVA_04773 at 126.023 kb on + strand, within BACOVA_04773 at 126.089 kb on + strand, within BACOVA_04773 at 126.119 kb on + strand, within BACOVA_04773 at 126.149 kb on + strand, within BACOVA_04773 at 126.149 kb on + strand, within BACOVA_04773 at 126.149 kb on + strand, within BACOVA_04773 at 126.278 kb on + strand, within BACOVA_04773 at 126.278 kb on + strand, within BACOVA_04773 at 126.432 kb on + strand at 126.448 kb on + strand at 126.448 kb on + strand at 126.448 kb on + strand at 126.452 kb on + strand at 126.523 kb on + strand, within BACOVA_04774 at 126.533 kb on + strand, within BACOVA_04774 at 126.533 kb on + strand, within BACOVA_04774 at 126.536 kb on + strand, within BACOVA_04774 at 126.635 kb on + strand, within BACOVA_04774 at 126.643 kb on + strand, within BACOVA_04774 at 126.840 kb on + strand at 126.842 kb on + strand at 126.842 kb on + strand at 127.060 kb on + strand, within BACOVA_04775 at 127.122 kb on + strand, within BACOVA_04775 at 127.122 kb on + strand, within BACOVA_04775 at 127.122 kb on + strand, within BACOVA_04775 at 127.303 kb on + strand, within BACOVA_04775
Per-strain Table
Position Strand Gene LocusTag Fraction Brucella 1 x (C) complex media remove 124,821 + +1.4 124,821 + -2.0 124,845 + -0.8 124,866 + -0.2 124,918 + +1.3 124,933 + -1.5 125,214 + BACOVA_04771 0.59 -0.2 125,393 + +0.2 125,411 + -1.0 125,558 + BACOVA_04772 0.39 +0.8 125,784 + -0.8 125,807 + +0.4 125,899 + BACOVA_04773 0.16 -0.5 125,899 + BACOVA_04773 0.16 +0.4 126,023 + BACOVA_04773 0.36 +0.2 126,089 + BACOVA_04773 0.47 -1.5 126,119 + BACOVA_04773 0.51 +1.1 126,149 + BACOVA_04773 0.56 -0.2 126,149 + BACOVA_04773 0.56 -0.8 126,149 + BACOVA_04773 0.56 +0.7 126,278 + BACOVA_04773 0.77 +0.8 126,278 + BACOVA_04773 0.77 +0.8 126,432 + -0.8 126,448 + -0.1 126,448 + +0.8 126,448 + -0.4 126,452 + +1.6 126,523 + BACOVA_04774 0.26 -0.1 126,533 + BACOVA_04774 0.28 -0.8 126,533 + BACOVA_04774 0.28 +0.5 126,536 + BACOVA_04774 0.29 -0.5 126,635 + BACOVA_04774 0.54 -0.6 126,643 + BACOVA_04774 0.56 -0.3 126,840 + +1.7 126,842 + -0.7 126,842 + -1.5 127,060 + BACOVA_04775 0.18 -1.3 127,122 + BACOVA_04775 0.23 +0.8 127,122 + BACOVA_04775 0.23 +1.1 127,122 + BACOVA_04775 0.23 -2.4 127,303 + BACOVA_04775 0.39 +0.5
Or see this region's nucleotide sequence