Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_01656

Experiment: Brucella 1 x (C) complex media

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_01655 and BACOVA_01656 are separated by 152 nucleotidesBACOVA_01656 and BACOVA_01657 are separated by 25 nucleotidesBACOVA_01657 and BACOVA_01658 overlap by 11 nucleotides BACOVA_01655: BACOVA_01655 - ribosomal protein L11 methyltransferase, at 64,582 to 65,430 _01655 BACOVA_01656: BACOVA_01656 - hypothetical protein, at 65,583 to 66,929 _01656 BACOVA_01657: BACOVA_01657 - hypothetical protein, at 66,955 to 67,521 _01657 BACOVA_01658: BACOVA_01658 - hypothetical protein, at 67,511 to 68,551 _01658 Position (kb) 65 66 67Strain fitness (log2 ratio) -2 -1 0 1 2at 64.583 kb on + strandat 64.629 kb on + strandat 64.630 kb on - strandat 64.631 kb on + strandat 64.632 kb on - strandat 64.632 kb on - strandat 64.694 kb on + strand, within BACOVA_01655at 64.695 kb on - strand, within BACOVA_01655at 64.707 kb on + strand, within BACOVA_01655at 64.709 kb on + strand, within BACOVA_01655at 64.709 kb on + strand, within BACOVA_01655at 64.710 kb on - strand, within BACOVA_01655at 64.743 kb on - strand, within BACOVA_01655at 64.766 kb on - strand, within BACOVA_01655at 64.768 kb on - strand, within BACOVA_01655at 64.872 kb on + strand, within BACOVA_01655at 64.873 kb on - strand, within BACOVA_01655at 64.941 kb on + strand, within BACOVA_01655at 65.216 kb on + strand, within BACOVA_01655at 65.216 kb on + strand, within BACOVA_01655at 65.216 kb on + strand, within BACOVA_01655at 65.217 kb on - strand, within BACOVA_01655at 65.220 kb on + strand, within BACOVA_01655at 65.220 kb on + strand, within BACOVA_01655at 65.221 kb on - strand, within BACOVA_01655at 65.221 kb on - strand, within BACOVA_01655at 65.223 kb on - strand, within BACOVA_01655at 65.223 kb on - strand, within BACOVA_01655at 65.223 kb on - strand, within BACOVA_01655at 65.227 kb on - strand, within BACOVA_01655at 65.227 kb on - strand, within BACOVA_01655at 65.227 kb on - strand, within BACOVA_01655at 65.227 kb on - strand, within BACOVA_01655at 65.301 kb on + strand, within BACOVA_01655at 65.301 kb on + strand, within BACOVA_01655at 65.302 kb on - strand, within BACOVA_01655at 65.304 kb on - strand, within BACOVA_01655at 65.369 kb on - strandat 65.431 kb on - strandat 65.467 kb on - strandat 65.492 kb on - strandat 65.542 kb on + strandat 65.543 kb on - strandat 65.543 kb on - strandat 65.551 kb on + strandat 65.566 kb on - strandat 65.570 kb on - strandat 65.570 kb on - strandat 65.608 kb on + strandat 65.664 kb on + strandat 65.665 kb on - strandat 65.665 kb on - strandat 65.745 kb on + strand, within BACOVA_01656at 65.746 kb on - strand, within BACOVA_01656at 65.763 kb on - strand, within BACOVA_01656at 65.837 kb on + strand, within BACOVA_01656at 65.861 kb on + strand, within BACOVA_01656at 65.861 kb on + strand, within BACOVA_01656at 65.867 kb on - strand, within BACOVA_01656at 65.867 kb on - strand, within BACOVA_01656at 65.868 kb on + strand, within BACOVA_01656at 65.870 kb on + strand, within BACOVA_01656at 66.012 kb on + strand, within BACOVA_01656at 66.055 kb on + strand, within BACOVA_01656at 66.059 kb on + strand, within BACOVA_01656at 66.068 kb on + strand, within BACOVA_01656at 66.069 kb on - strand, within BACOVA_01656at 66.069 kb on - strand, within BACOVA_01656at 66.069 kb on - strand, within BACOVA_01656at 66.069 kb on - strand, within BACOVA_01656at 66.072 kb on + strand, within BACOVA_01656at 66.073 kb on - strand, within BACOVA_01656at 66.132 kb on + strand, within BACOVA_01656at 66.175 kb on - strand, within BACOVA_01656at 66.175 kb on - strand, within BACOVA_01656at 66.287 kb on + strand, within BACOVA_01656at 66.288 kb on - strand, within BACOVA_01656at 66.319 kb on - strand, within BACOVA_01656at 66.322 kb on - strand, within BACOVA_01656at 66.340 kb on + strand, within BACOVA_01656at 66.350 kb on + strand, within BACOVA_01656at 66.360 kb on + strand, within BACOVA_01656at 66.360 kb on + strand, within BACOVA_01656at 66.360 kb on + strand, within BACOVA_01656at 66.389 kb on + strand, within BACOVA_01656at 66.396 kb on + strand, within BACOVA_01656at 66.423 kb on - strand, within BACOVA_01656at 66.434 kb on + strand, within BACOVA_01656at 66.488 kb on + strand, within BACOVA_01656at 66.496 kb on + strand, within BACOVA_01656at 66.496 kb on + strand, within BACOVA_01656at 66.513 kb on + strand, within BACOVA_01656at 66.527 kb on + strand, within BACOVA_01656at 66.530 kb on + strand, within BACOVA_01656at 66.582 kb on + strand, within BACOVA_01656at 66.605 kb on + strand, within BACOVA_01656at 66.626 kb on + strand, within BACOVA_01656at 66.644 kb on + strand, within BACOVA_01656at 66.647 kb on + strand, within BACOVA_01656at 66.647 kb on + strand, within BACOVA_01656at 66.647 kb on + strand, within BACOVA_01656at 66.684 kb on - strand, within BACOVA_01656at 66.687 kb on - strand, within BACOVA_01656at 66.704 kb on + strand, within BACOVA_01656at 66.705 kb on - strand, within BACOVA_01656at 66.709 kb on - strand, within BACOVA_01656at 66.744 kb on + strand, within BACOVA_01656at 66.744 kb on + strand, within BACOVA_01656at 66.745 kb on - strand, within BACOVA_01656at 66.746 kb on + strand, within BACOVA_01656at 66.747 kb on - strand, within BACOVA_01656at 66.810 kb on - strandat 66.834 kb on - strandat 66.855 kb on - strandat 66.878 kb on + strandat 66.902 kb on + strandat 66.918 kb on + strandat 66.918 kb on + strandat 66.919 kb on - strandat 66.921 kb on - strandat 66.928 kb on - strandat 66.995 kb on + strandat 67.026 kb on + strand, within BACOVA_01657at 67.027 kb on - strand, within BACOVA_01657at 67.030 kb on + strand, within BACOVA_01657at 67.030 kb on + strand, within BACOVA_01657at 67.031 kb on - strand, within BACOVA_01657at 67.099 kb on - strand, within BACOVA_01657at 67.120 kb on - strand, within BACOVA_01657at 67.120 kb on - strand, within BACOVA_01657at 67.122 kb on + strand, within BACOVA_01657at 67.122 kb on + strand, within BACOVA_01657at 67.128 kb on + strand, within BACOVA_01657at 67.160 kb on - strand, within BACOVA_01657at 67.177 kb on - strand, within BACOVA_01657at 67.216 kb on - strand, within BACOVA_01657at 67.290 kb on + strand, within BACOVA_01657at 67.327 kb on + strand, within BACOVA_01657at 67.350 kb on + strand, within BACOVA_01657at 67.356 kb on + strand, within BACOVA_01657at 67.357 kb on - strand, within BACOVA_01657at 67.373 kb on + strand, within BACOVA_01657at 67.380 kb on + strand, within BACOVA_01657at 67.380 kb on + strand, within BACOVA_01657at 67.407 kb on + strand, within BACOVA_01657at 67.427 kb on - strand, within BACOVA_01657at 67.517 kb on + strandat 67.518 kb on - strandat 67.519 kb on + strandat 67.519 kb on + strandat 67.520 kb on - strandat 67.530 kb on + strandat 67.544 kb on + strandat 67.596 kb on - strandat 67.605 kb on - strandat 67.736 kb on - strand, within BACOVA_01658at 67.736 kb on - strand, within BACOVA_01658at 67.745 kb on + strand, within BACOVA_01658at 67.750 kb on + strand, within BACOVA_01658at 67.750 kb on + strand, within BACOVA_01658at 67.751 kb on - strand, within BACOVA_01658at 67.763 kb on + strand, within BACOVA_01658at 67.764 kb on - strand, within BACOVA_01658at 67.765 kb on + strand, within BACOVA_01658at 67.765 kb on + strand, within BACOVA_01658at 67.765 kb on + strand, within BACOVA_01658at 67.766 kb on - strand, within BACOVA_01658at 67.811 kb on - strand, within BACOVA_01658at 67.816 kb on - strand, within BACOVA_01658at 67.855 kb on + strand, within BACOVA_01658at 67.855 kb on + strand, within BACOVA_01658at 67.861 kb on - strand, within BACOVA_01658at 67.915 kb on - strand, within BACOVA_01658at 67.915 kb on - strand, within BACOVA_01658at 67.915 kb on - strand, within BACOVA_01658

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Per-strain Table

Position Strand Gene LocusTag Fraction Brucella 1 x (C) complex media
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64,583 + -0.5
64,629 + -0.5
64,630 - +0.2
64,631 + +1.3
64,632 - +0.2
64,632 - -0.1
64,694 + BACOVA_01655 0.13 +0.3
64,695 - BACOVA_01655 0.13 -0.1
64,707 + BACOVA_01655 0.15 -0.3
64,709 + BACOVA_01655 0.15 -1.4
64,709 + BACOVA_01655 0.15 -0.5
64,710 - BACOVA_01655 0.15 -0.8
64,743 - BACOVA_01655 0.19 +1.0
64,766 - BACOVA_01655 0.22 -1.3
64,768 - BACOVA_01655 0.22 +0.4
64,872 + BACOVA_01655 0.34 +0.6
64,873 - BACOVA_01655 0.34 +0.4
64,941 + BACOVA_01655 0.42 +0.6
65,216 + BACOVA_01655 0.75 -0.4
65,216 + BACOVA_01655 0.75 +1.9
65,216 + BACOVA_01655 0.75 +0.5
65,217 - BACOVA_01655 0.75 +0.6
65,220 + BACOVA_01655 0.75 +0.2
65,220 + BACOVA_01655 0.75 +0.2
65,221 - BACOVA_01655 0.75 +0.2
65,221 - BACOVA_01655 0.75 -0.4
65,223 - BACOVA_01655 0.76 -0.7
65,223 - BACOVA_01655 0.76 -0.4
65,223 - BACOVA_01655 0.76 +0.0
65,227 - BACOVA_01655 0.76 -0.4
65,227 - BACOVA_01655 0.76 -0.0
65,227 - BACOVA_01655 0.76 +1.0
65,227 - BACOVA_01655 0.76 +0.6
65,301 + BACOVA_01655 0.85 +1.6
65,301 + BACOVA_01655 0.85 -0.7
65,302 - BACOVA_01655 0.85 -0.0
65,304 - BACOVA_01655 0.85 -0.1
65,369 - -2.0
65,431 - +0.1
65,467 - -1.4
65,492 - +1.3
65,542 + +0.3
65,543 - -0.2
65,543 - +0.6
65,551 + -0.7
65,566 - -0.4
65,570 - +1.1
65,570 - +0.6
65,608 + +0.0
65,664 + +0.6
65,665 - +0.2
65,665 - +0.8
65,745 + BACOVA_01656 0.12 -0.6
65,746 - BACOVA_01656 0.12 +0.0
65,763 - BACOVA_01656 0.13 +0.4
65,837 + BACOVA_01656 0.19 +0.2
65,861 + BACOVA_01656 0.21 -0.6
65,861 + BACOVA_01656 0.21 +1.0
65,867 - BACOVA_01656 0.21 +2.4
65,867 - BACOVA_01656 0.21 +0.1
65,868 + BACOVA_01656 0.21 +1.8
65,870 + BACOVA_01656 0.21 +1.1
66,012 + BACOVA_01656 0.32 +0.4
66,055 + BACOVA_01656 0.35 -0.9
66,059 + BACOVA_01656 0.35 +1.1
66,068 + BACOVA_01656 0.36 -0.4
66,069 - BACOVA_01656 0.36 +0.3
66,069 - BACOVA_01656 0.36 +0.3
66,069 - BACOVA_01656 0.36 +0.6
66,069 - BACOVA_01656 0.36 +1.2
66,072 + BACOVA_01656 0.36 +0.3
66,073 - BACOVA_01656 0.36 -0.4
66,132 + BACOVA_01656 0.41 +1.4
66,175 - BACOVA_01656 0.44 +0.1
66,175 - BACOVA_01656 0.44 +0.4
66,287 + BACOVA_01656 0.52 +0.3
66,288 - BACOVA_01656 0.52 -1.0
66,319 - BACOVA_01656 0.55 +0.6
66,322 - BACOVA_01656 0.55 +0.1
66,340 + BACOVA_01656 0.56 -0.4
66,350 + BACOVA_01656 0.57 +0.9
66,360 + BACOVA_01656 0.58 -1.0
66,360 + BACOVA_01656 0.58 +0.0
66,360 + BACOVA_01656 0.58 +1.4
66,389 + BACOVA_01656 0.60 -0.0
66,396 + BACOVA_01656 0.60 +1.6
66,423 - BACOVA_01656 0.62 -1.5
66,434 + BACOVA_01656 0.63 +0.6
66,488 + BACOVA_01656 0.67 +1.8
66,496 + BACOVA_01656 0.68 +0.2
66,496 + BACOVA_01656 0.68 -0.4
66,513 + BACOVA_01656 0.69 +0.8
66,527 + BACOVA_01656 0.70 -0.4
66,530 + BACOVA_01656 0.70 +0.1
66,582 + BACOVA_01656 0.74 -0.7
66,605 + BACOVA_01656 0.76 +0.3
66,626 + BACOVA_01656 0.77 +0.2
66,644 + BACOVA_01656 0.79 +1.8
66,647 + BACOVA_01656 0.79 +1.1
66,647 + BACOVA_01656 0.79 -0.6
66,647 + BACOVA_01656 0.79 -0.5
66,684 - BACOVA_01656 0.82 -1.5
66,687 - BACOVA_01656 0.82 +1.4
66,704 + BACOVA_01656 0.83 -0.1
66,705 - BACOVA_01656 0.83 +1.6
66,709 - BACOVA_01656 0.84 -0.4
66,744 + BACOVA_01656 0.86 +0.0
66,744 + BACOVA_01656 0.86 -0.2
66,745 - BACOVA_01656 0.86 -0.2
66,746 + BACOVA_01656 0.86 -1.9
66,747 - BACOVA_01656 0.86 -1.0
66,810 - -0.4
66,834 - +0.6
66,855 - -0.1
66,878 + -1.1
66,902 + -0.2
66,918 + -0.6
66,918 + +0.6
66,919 - -0.4
66,921 - -1.0
66,928 - -0.6
66,995 + +1.0
67,026 + BACOVA_01657 0.13 +0.4
67,027 - BACOVA_01657 0.13 -0.4
67,030 + BACOVA_01657 0.13 +2.0
67,030 + BACOVA_01657 0.13 +0.2
67,031 - BACOVA_01657 0.13 +0.6
67,099 - BACOVA_01657 0.25 +0.2
67,120 - BACOVA_01657 0.29 +0.6
67,120 - BACOVA_01657 0.29 +1.0
67,122 + BACOVA_01657 0.29 +0.6
67,122 + BACOVA_01657 0.29 +1.0
67,128 + BACOVA_01657 0.31 +0.4
67,160 - BACOVA_01657 0.36 +0.4
67,177 - BACOVA_01657 0.39 -0.2
67,216 - BACOVA_01657 0.46 -0.5
67,290 + BACOVA_01657 0.59 -0.3
67,327 + BACOVA_01657 0.66 -0.0
67,350 + BACOVA_01657 0.70 -0.0
67,356 + BACOVA_01657 0.71 +1.1
67,357 - BACOVA_01657 0.71 +1.2
67,373 + BACOVA_01657 0.74 +0.3
67,380 + BACOVA_01657 0.75 +2.0
67,380 + BACOVA_01657 0.75 +1.0
67,407 + BACOVA_01657 0.80 +0.1
67,427 - BACOVA_01657 0.83 -1.4
67,517 + +0.6
67,518 - +2.0
67,519 + +1.9
67,519 + -0.1
67,520 - -0.3
67,530 + -1.5
67,544 + -0.1
67,596 - +1.0
67,605 - -2.7
67,736 - BACOVA_01658 0.22 +0.1
67,736 - BACOVA_01658 0.22 +0.4
67,745 + BACOVA_01658 0.22 +0.8
67,750 + BACOVA_01658 0.23 -1.1
67,750 + BACOVA_01658 0.23 +0.5
67,751 - BACOVA_01658 0.23 -0.4
67,763 + BACOVA_01658 0.24 +0.4
67,764 - BACOVA_01658 0.24 +0.8
67,765 + BACOVA_01658 0.24 +1.0
67,765 + BACOVA_01658 0.24 +1.0
67,765 + BACOVA_01658 0.24 +0.5
67,766 - BACOVA_01658 0.24 -0.5
67,811 - BACOVA_01658 0.29 +0.9
67,816 - BACOVA_01658 0.29 +0.0
67,855 + BACOVA_01658 0.33 +1.0
67,855 + BACOVA_01658 0.33 -1.0
67,861 - BACOVA_01658 0.34 +1.1
67,915 - BACOVA_01658 0.39 -0.0
67,915 - BACOVA_01658 0.39 +0.2
67,915 - BACOVA_01658 0.39 -0.4

Or see this region's nucleotide sequence