Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_03493

Experiment: BHI 1 x (C) complex media

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_03492 and BACOVA_03493 are separated by 9 nucleotidesBACOVA_03493 and BACOVA_03494 overlap by 35 nucleotides BACOVA_03492: BACOVA_03492 - glycosyl hydrolase, family 43, at 249,563 to 250,609 _03492 BACOVA_03493: BACOVA_03493 - hypothetical protein, at 250,619 to 251,914 _03493 BACOVA_03494: BACOVA_03494 - glycosyl hydrolase, family 88, at 251,880 to 253,052 _03494 Position (kb) 250 251 252Strain fitness (log2 ratio) -2 -1 0 1 2at 249.619 kb on + strandat 249.620 kb on - strandat 249.627 kb on + strandat 249.637 kb on - strandat 249.637 kb on - strandat 249.656 kb on + strandat 249.657 kb on - strandat 249.659 kb on - strandat 249.732 kb on + strand, within BACOVA_03492at 249.733 kb on - strand, within BACOVA_03492at 249.733 kb on - strand, within BACOVA_03492at 249.733 kb on - strand, within BACOVA_03492at 249.735 kb on - strand, within BACOVA_03492at 249.739 kb on + strand, within BACOVA_03492at 249.749 kb on + strand, within BACOVA_03492at 249.750 kb on - strand, within BACOVA_03492at 249.752 kb on + strand, within BACOVA_03492at 249.758 kb on + strand, within BACOVA_03492at 249.759 kb on - strand, within BACOVA_03492at 249.767 kb on + strand, within BACOVA_03492at 249.767 kb on + strand, within BACOVA_03492at 249.803 kb on - strand, within BACOVA_03492at 249.820 kb on + strand, within BACOVA_03492at 249.837 kb on + strand, within BACOVA_03492at 249.846 kb on - strand, within BACOVA_03492at 249.940 kb on - strand, within BACOVA_03492at 249.965 kb on - strand, within BACOVA_03492at 249.987 kb on + strand, within BACOVA_03492at 250.016 kb on + strand, within BACOVA_03492at 250.016 kb on + strand, within BACOVA_03492at 250.016 kb on + strand, within BACOVA_03492at 250.021 kb on + strand, within BACOVA_03492at 250.148 kb on + strand, within BACOVA_03492at 250.184 kb on + strand, within BACOVA_03492at 250.184 kb on + strand, within BACOVA_03492at 250.184 kb on + strand, within BACOVA_03492at 250.184 kb on + strand, within BACOVA_03492at 250.184 kb on + strand, within BACOVA_03492at 250.185 kb on - strand, within BACOVA_03492at 250.187 kb on - strand, within BACOVA_03492at 250.187 kb on - strand, within BACOVA_03492at 250.208 kb on + strand, within BACOVA_03492at 250.208 kb on + strand, within BACOVA_03492at 250.231 kb on + strand, within BACOVA_03492at 250.276 kb on + strand, within BACOVA_03492at 250.277 kb on - strand, within BACOVA_03492at 250.282 kb on + strand, within BACOVA_03492at 250.288 kb on + strand, within BACOVA_03492at 250.288 kb on + strand, within BACOVA_03492at 250.297 kb on + strand, within BACOVA_03492at 250.303 kb on - strand, within BACOVA_03492at 250.330 kb on + strand, within BACOVA_03492at 250.330 kb on + strand, within BACOVA_03492at 250.360 kb on + strand, within BACOVA_03492at 250.361 kb on - strand, within BACOVA_03492at 250.363 kb on + strand, within BACOVA_03492at 250.364 kb on - strand, within BACOVA_03492at 250.396 kb on + strand, within BACOVA_03492at 250.436 kb on - strand, within BACOVA_03492at 250.439 kb on + strand, within BACOVA_03492at 250.440 kb on - strand, within BACOVA_03492at 250.440 kb on - strand, within BACOVA_03492at 250.472 kb on + strand, within BACOVA_03492at 250.474 kb on + strand, within BACOVA_03492at 250.474 kb on + strand, within BACOVA_03492at 250.474 kb on + strand, within BACOVA_03492at 250.475 kb on - strand, within BACOVA_03492at 250.523 kb on + strandat 250.527 kb on + strandat 250.527 kb on + strandat 250.528 kb on - strandat 250.560 kb on + strandat 250.560 kb on + strandat 250.709 kb on - strandat 250.714 kb on + strandat 250.714 kb on + strandat 250.775 kb on + strand, within BACOVA_03493at 250.776 kb on - strand, within BACOVA_03493at 250.776 kb on - strand, within BACOVA_03493at 250.776 kb on - strand, within BACOVA_03493at 250.776 kb on - strand, within BACOVA_03493at 250.776 kb on - strand, within BACOVA_03493at 250.777 kb on + strand, within BACOVA_03493at 250.787 kb on + strand, within BACOVA_03493at 250.803 kb on - strand, within BACOVA_03493at 250.809 kb on + strand, within BACOVA_03493at 250.849 kb on - strand, within BACOVA_03493at 250.891 kb on + strand, within BACOVA_03493at 250.894 kb on - strand, within BACOVA_03493at 250.909 kb on - strand, within BACOVA_03493at 250.923 kb on - strand, within BACOVA_03493at 250.924 kb on + strand, within BACOVA_03493at 250.924 kb on + strand, within BACOVA_03493at 250.926 kb on + strand, within BACOVA_03493at 250.926 kb on + strand, within BACOVA_03493at 250.926 kb on + strand, within BACOVA_03493at 250.926 kb on + strand, within BACOVA_03493at 250.927 kb on - strand, within BACOVA_03493at 250.927 kb on - strand, within BACOVA_03493at 250.927 kb on - strand, within BACOVA_03493at 250.927 kb on - strand, within BACOVA_03493at 250.932 kb on + strand, within BACOVA_03493at 250.961 kb on - strand, within BACOVA_03493at 251.058 kb on - strand, within BACOVA_03493at 251.079 kb on + strand, within BACOVA_03493at 251.079 kb on + strand, within BACOVA_03493at 251.080 kb on - strand, within BACOVA_03493at 251.175 kb on + strand, within BACOVA_03493at 251.175 kb on + strand, within BACOVA_03493at 251.176 kb on - strand, within BACOVA_03493at 251.195 kb on - strand, within BACOVA_03493at 251.208 kb on - strand, within BACOVA_03493at 251.219 kb on + strand, within BACOVA_03493at 251.293 kb on + strand, within BACOVA_03493at 251.335 kb on + strand, within BACOVA_03493at 251.387 kb on + strand, within BACOVA_03493at 251.387 kb on + strand, within BACOVA_03493at 251.388 kb on - strand, within BACOVA_03493at 251.434 kb on + strand, within BACOVA_03493at 251.463 kb on - strand, within BACOVA_03493at 251.465 kb on - strand, within BACOVA_03493at 251.466 kb on + strand, within BACOVA_03493at 251.466 kb on + strand, within BACOVA_03493at 251.467 kb on - strand, within BACOVA_03493at 251.467 kb on - strand, within BACOVA_03493at 251.471 kb on - strand, within BACOVA_03493at 251.471 kb on - strand, within BACOVA_03493at 251.475 kb on - strand, within BACOVA_03493at 251.553 kb on + strand, within BACOVA_03493at 251.575 kb on + strand, within BACOVA_03493at 251.608 kb on + strand, within BACOVA_03493at 251.609 kb on - strand, within BACOVA_03493at 251.654 kb on - strand, within BACOVA_03493at 251.719 kb on + strand, within BACOVA_03493at 251.820 kb on + strandat 251.880 kb on - strandat 251.896 kb on + strandat 251.903 kb on - strandat 251.908 kb on + strandat 251.909 kb on - strandat 251.909 kb on - strandat 251.912 kb on + strandat 251.918 kb on + strandat 251.929 kb on + strandat 251.929 kb on + strandat 251.930 kb on - strandat 251.932 kb on - strandat 252.019 kb on + strand, within BACOVA_03494at 252.033 kb on - strand, within BACOVA_03494at 252.042 kb on - strand, within BACOVA_03494at 252.046 kb on - strand, within BACOVA_03494at 252.100 kb on - strand, within BACOVA_03494at 252.113 kb on + strand, within BACOVA_03494at 252.124 kb on - strand, within BACOVA_03494at 252.179 kb on + strand, within BACOVA_03494at 252.179 kb on + strand, within BACOVA_03494at 252.179 kb on + strand, within BACOVA_03494at 252.180 kb on - strand, within BACOVA_03494at 252.180 kb on - strand, within BACOVA_03494at 252.225 kb on + strand, within BACOVA_03494at 252.231 kb on + strand, within BACOVA_03494at 252.232 kb on - strand, within BACOVA_03494at 252.249 kb on + strand, within BACOVA_03494at 252.250 kb on - strand, within BACOVA_03494at 252.250 kb on - strand, within BACOVA_03494at 252.288 kb on + strand, within BACOVA_03494at 252.288 kb on + strand, within BACOVA_03494at 252.301 kb on - strand, within BACOVA_03494at 252.302 kb on + strand, within BACOVA_03494at 252.355 kb on - strand, within BACOVA_03494at 252.403 kb on + strand, within BACOVA_03494at 252.403 kb on + strand, within BACOVA_03494at 252.404 kb on - strand, within BACOVA_03494at 252.406 kb on - strand, within BACOVA_03494at 252.406 kb on - strand, within BACOVA_03494at 252.407 kb on + strand, within BACOVA_03494at 252.407 kb on + strand, within BACOVA_03494at 252.435 kb on + strand, within BACOVA_03494at 252.436 kb on - strand, within BACOVA_03494at 252.438 kb on - strand, within BACOVA_03494at 252.480 kb on + strand, within BACOVA_03494at 252.480 kb on + strand, within BACOVA_03494at 252.480 kb on + strand, within BACOVA_03494at 252.489 kb on + strand, within BACOVA_03494at 252.500 kb on + strand, within BACOVA_03494at 252.500 kb on + strand, within BACOVA_03494at 252.501 kb on - strand, within BACOVA_03494at 252.501 kb on - strand, within BACOVA_03494at 252.501 kb on - strand, within BACOVA_03494at 252.504 kb on - strand, within BACOVA_03494at 252.504 kb on - strand, within BACOVA_03494at 252.504 kb on - strand, within BACOVA_03494at 252.504 kb on - strand, within BACOVA_03494at 252.504 kb on - strand, within BACOVA_03494at 252.507 kb on + strand, within BACOVA_03494at 252.507 kb on + strand, within BACOVA_03494at 252.552 kb on + strand, within BACOVA_03494at 252.552 kb on + strand, within BACOVA_03494at 252.553 kb on - strand, within BACOVA_03494at 252.553 kb on - strand, within BACOVA_03494at 252.659 kb on + strand, within BACOVA_03494at 252.659 kb on + strand, within BACOVA_03494at 252.660 kb on - strand, within BACOVA_03494at 252.660 kb on - strand, within BACOVA_03494at 252.660 kb on - strand, within BACOVA_03494at 252.660 kb on - strand, within BACOVA_03494at 252.677 kb on + strand, within BACOVA_03494at 252.680 kb on - strand, within BACOVA_03494at 252.680 kb on - strand, within BACOVA_03494at 252.735 kb on + strand, within BACOVA_03494at 252.736 kb on - strand, within BACOVA_03494at 252.749 kb on + strand, within BACOVA_03494at 252.749 kb on + strand, within BACOVA_03494at 252.750 kb on - strand, within BACOVA_03494at 252.803 kb on + strand, within BACOVA_03494at 252.804 kb on - strand, within BACOVA_03494at 252.830 kb on + strand, within BACOVA_03494at 252.831 kb on - strand, within BACOVA_03494at 252.885 kb on + strand, within BACOVA_03494at 252.886 kb on - strand, within BACOVA_03494

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Per-strain Table

Position Strand Gene LocusTag Fraction BHI 1 x (C) complex media
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249,619 + -0.4
249,620 - +0.2
249,627 + -1.5
249,637 - -0.1
249,637 - +0.2
249,656 + +0.7
249,657 - +0.4
249,659 - +0.3
249,732 + BACOVA_03492 0.16 +0.2
249,733 - BACOVA_03492 0.16 -0.3
249,733 - BACOVA_03492 0.16 -1.6
249,733 - BACOVA_03492 0.16 -0.2
249,735 - BACOVA_03492 0.16 -0.3
249,739 + BACOVA_03492 0.17 +0.4
249,749 + BACOVA_03492 0.18 -0.1
249,750 - BACOVA_03492 0.18 +0.1
249,752 + BACOVA_03492 0.18 +0.0
249,758 + BACOVA_03492 0.19 -0.1
249,759 - BACOVA_03492 0.19 -0.7
249,767 + BACOVA_03492 0.19 +0.5
249,767 + BACOVA_03492 0.19 +0.4
249,803 - BACOVA_03492 0.23 +0.3
249,820 + BACOVA_03492 0.25 -0.9
249,837 + BACOVA_03492 0.26 +0.7
249,846 - BACOVA_03492 0.27 +0.8
249,940 - BACOVA_03492 0.36 -1.5
249,965 - BACOVA_03492 0.38 +0.1
249,987 + BACOVA_03492 0.40 +0.7
250,016 + BACOVA_03492 0.43 -1.7
250,016 + BACOVA_03492 0.43 +0.5
250,016 + BACOVA_03492 0.43 +2.2
250,021 + BACOVA_03492 0.44 +0.4
250,148 + BACOVA_03492 0.56 +0.1
250,184 + BACOVA_03492 0.59 -0.2
250,184 + BACOVA_03492 0.59 -0.1
250,184 + BACOVA_03492 0.59 -0.3
250,184 + BACOVA_03492 0.59 +0.2
250,184 + BACOVA_03492 0.59 -0.4
250,185 - BACOVA_03492 0.59 +0.2
250,187 - BACOVA_03492 0.60 +0.7
250,187 - BACOVA_03492 0.60 -0.4
250,208 + BACOVA_03492 0.62 -1.5
250,208 + BACOVA_03492 0.62 -0.3
250,231 + BACOVA_03492 0.64 -0.3
250,276 + BACOVA_03492 0.68 +1.0
250,277 - BACOVA_03492 0.68 +1.2
250,282 + BACOVA_03492 0.69 +0.8
250,288 + BACOVA_03492 0.69 -1.1
250,288 + BACOVA_03492 0.69 -0.4
250,297 + BACOVA_03492 0.70 -1.7
250,303 - BACOVA_03492 0.71 -0.3
250,330 + BACOVA_03492 0.73 +0.2
250,330 + BACOVA_03492 0.73 +0.2
250,360 + BACOVA_03492 0.76 -1.3
250,361 - BACOVA_03492 0.76 -0.2
250,363 + BACOVA_03492 0.76 -1.2
250,364 - BACOVA_03492 0.77 +0.3
250,396 + BACOVA_03492 0.80 +0.7
250,436 - BACOVA_03492 0.83 +0.1
250,439 + BACOVA_03492 0.84 +1.2
250,440 - BACOVA_03492 0.84 +0.3
250,440 - BACOVA_03492 0.84 +0.4
250,472 + BACOVA_03492 0.87 +0.1
250,474 + BACOVA_03492 0.87 -0.2
250,474 + BACOVA_03492 0.87 +0.5
250,474 + BACOVA_03492 0.87 -0.3
250,475 - BACOVA_03492 0.87 -0.2
250,523 + +0.3
250,527 + -0.3
250,527 + +0.4
250,528 - +0.1
250,560 + +1.1
250,560 + +0.9
250,709 - -0.0
250,714 + +0.7
250,714 + +1.1
250,775 + BACOVA_03493 0.12 +0.9
250,776 - BACOVA_03493 0.12 -0.3
250,776 - BACOVA_03493 0.12 -2.2
250,776 - BACOVA_03493 0.12 -0.4
250,776 - BACOVA_03493 0.12 +0.2
250,776 - BACOVA_03493 0.12 -0.4
250,777 + BACOVA_03493 0.12 +0.7
250,787 + BACOVA_03493 0.13 +1.3
250,803 - BACOVA_03493 0.14 -0.1
250,809 + BACOVA_03493 0.15 -0.1
250,849 - BACOVA_03493 0.18 -0.4
250,891 + BACOVA_03493 0.21 +0.5
250,894 - BACOVA_03493 0.21 -0.2
250,909 - BACOVA_03493 0.22 -1.3
250,923 - BACOVA_03493 0.23 -0.3
250,924 + BACOVA_03493 0.24 +0.7
250,924 + BACOVA_03493 0.24 -0.7
250,926 + BACOVA_03493 0.24 +0.7
250,926 + BACOVA_03493 0.24 +0.7
250,926 + BACOVA_03493 0.24 -0.1
250,926 + BACOVA_03493 0.24 -0.3
250,927 - BACOVA_03493 0.24 -0.8
250,927 - BACOVA_03493 0.24 +0.7
250,927 - BACOVA_03493 0.24 +0.9
250,927 - BACOVA_03493 0.24 -0.3
250,932 + BACOVA_03493 0.24 -1.1
250,961 - BACOVA_03493 0.26 +0.3
251,058 - BACOVA_03493 0.34 -0.8
251,079 + BACOVA_03493 0.35 -0.9
251,079 + BACOVA_03493 0.35 -1.3
251,080 - BACOVA_03493 0.36 +0.0
251,175 + BACOVA_03493 0.43 -0.0
251,175 + BACOVA_03493 0.43 +0.3
251,176 - BACOVA_03493 0.43 -0.0
251,195 - BACOVA_03493 0.44 -0.1
251,208 - BACOVA_03493 0.45 -1.9
251,219 + BACOVA_03493 0.46 -0.5
251,293 + BACOVA_03493 0.52 -0.9
251,335 + BACOVA_03493 0.55 -1.3
251,387 + BACOVA_03493 0.59 +1.3
251,387 + BACOVA_03493 0.59 +0.2
251,388 - BACOVA_03493 0.59 -0.6
251,434 + BACOVA_03493 0.63 -0.0
251,463 - BACOVA_03493 0.65 -0.4
251,465 - BACOVA_03493 0.65 -0.6
251,466 + BACOVA_03493 0.65 +0.1
251,466 + BACOVA_03493 0.65 +0.1
251,467 - BACOVA_03493 0.65 -0.3
251,467 - BACOVA_03493 0.65 +1.7
251,471 - BACOVA_03493 0.66 +0.2
251,471 - BACOVA_03493 0.66 -0.5
251,475 - BACOVA_03493 0.66 -0.3
251,553 + BACOVA_03493 0.72 -0.3
251,575 + BACOVA_03493 0.74 -1.0
251,608 + BACOVA_03493 0.76 +1.0
251,609 - BACOVA_03493 0.76 -0.3
251,654 - BACOVA_03493 0.80 -0.5
251,719 + BACOVA_03493 0.85 -0.3
251,820 + -0.6
251,880 - +0.4
251,896 + -0.3
251,903 - -1.0
251,908 + +0.5
251,909 - +0.3
251,909 - -0.7
251,912 + +1.5
251,918 + +0.9
251,929 + -0.8
251,929 + -0.1
251,930 - +1.5
251,932 - +1.3
252,019 + BACOVA_03494 0.12 +0.2
252,033 - BACOVA_03494 0.13 -0.7
252,042 - BACOVA_03494 0.14 +1.1
252,046 - BACOVA_03494 0.14 +0.7
252,100 - BACOVA_03494 0.19 +0.4
252,113 + BACOVA_03494 0.20 +0.4
252,124 - BACOVA_03494 0.21 -0.6
252,179 + BACOVA_03494 0.25 +0.4
252,179 + BACOVA_03494 0.25 -0.1
252,179 + BACOVA_03494 0.25 -0.3
252,180 - BACOVA_03494 0.26 +0.5
252,180 - BACOVA_03494 0.26 +0.8
252,225 + BACOVA_03494 0.29 +0.5
252,231 + BACOVA_03494 0.30 +0.7
252,232 - BACOVA_03494 0.30 -0.2
252,249 + BACOVA_03494 0.31 +0.4
252,250 - BACOVA_03494 0.32 -0.2
252,250 - BACOVA_03494 0.32 +0.3
252,288 + BACOVA_03494 0.35 -1.2
252,288 + BACOVA_03494 0.35 +1.0
252,301 - BACOVA_03494 0.36 -0.3
252,302 + BACOVA_03494 0.36 +1.0
252,355 - BACOVA_03494 0.40 +0.0
252,403 + BACOVA_03494 0.45 +0.8
252,403 + BACOVA_03494 0.45 -0.9
252,404 - BACOVA_03494 0.45 -1.3
252,406 - BACOVA_03494 0.45 -0.1
252,406 - BACOVA_03494 0.45 +1.8
252,407 + BACOVA_03494 0.45 +0.4
252,407 + BACOVA_03494 0.45 +1.0
252,435 + BACOVA_03494 0.47 +0.2
252,436 - BACOVA_03494 0.47 -0.9
252,438 - BACOVA_03494 0.48 +0.2
252,480 + BACOVA_03494 0.51 -0.9
252,480 + BACOVA_03494 0.51 -0.2
252,480 + BACOVA_03494 0.51 -0.2
252,489 + BACOVA_03494 0.52 -1.3
252,500 + BACOVA_03494 0.53 +0.3
252,500 + BACOVA_03494 0.53 -0.4
252,501 - BACOVA_03494 0.53 -1.7
252,501 - BACOVA_03494 0.53 -0.0
252,501 - BACOVA_03494 0.53 +0.1
252,504 - BACOVA_03494 0.53 -0.8
252,504 - BACOVA_03494 0.53 +0.1
252,504 - BACOVA_03494 0.53 -0.2
252,504 - BACOVA_03494 0.53 -0.3
252,504 - BACOVA_03494 0.53 -0.2
252,507 + BACOVA_03494 0.53 -0.3
252,507 + BACOVA_03494 0.53 -0.3
252,552 + BACOVA_03494 0.57 -0.9
252,552 + BACOVA_03494 0.57 -0.0
252,553 - BACOVA_03494 0.57 +1.6
252,553 - BACOVA_03494 0.57 +0.2
252,659 + BACOVA_03494 0.66 +0.1
252,659 + BACOVA_03494 0.66 -1.3
252,660 - BACOVA_03494 0.66 -2.3
252,660 - BACOVA_03494 0.66 +0.5
252,660 - BACOVA_03494 0.66 -2.2
252,660 - BACOVA_03494 0.66 -0.2
252,677 + BACOVA_03494 0.68 +0.1
252,680 - BACOVA_03494 0.68 -0.0
252,680 - BACOVA_03494 0.68 -0.1
252,735 + BACOVA_03494 0.73 +0.7
252,736 - BACOVA_03494 0.73 -0.1
252,749 + BACOVA_03494 0.74 -0.5
252,749 + BACOVA_03494 0.74 +0.1
252,750 - BACOVA_03494 0.74 +0.4
252,803 + BACOVA_03494 0.79 +0.3
252,804 - BACOVA_03494 0.79 -0.9
252,830 + BACOVA_03494 0.81 -0.3
252,831 - BACOVA_03494 0.81 +0.7
252,885 + BACOVA_03494 0.86 +0.2
252,886 - BACOVA_03494 0.86 +0.4

Or see this region's nucleotide sequence