Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS15465

Experiment: HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
3,130,857	+		A4249_RS15460	0.13	-0.2
3,130,857	+		A4249_RS15460	0.13	-0.3
3,130,857	+		A4249_RS15460	0.13	-1.1
3,130,858	-		A4249_RS15460	0.13	+0.7
3,130,920	+		A4249_RS15460	0.22	-0.6
3,130,921	-		A4249_RS15460	0.22	-0.9
3,130,921	-		A4249_RS15460	0.22	-0.0
3,130,965	+		A4249_RS15460	0.28	-0.2
3,130,965	+		A4249_RS15460	0.28	+0.4
3,130,966	-		A4249_RS15460	0.28	+1.1
3,130,966	-		A4249_RS15460	0.28	+0.3
3,130,966	-		A4249_RS15460	0.28	+1.5
3,131,176	-		A4249_RS15460	0.56	+1.1
3,131,208	+		A4249_RS15460	0.60	-0.3
3,131,263	-		A4249_RS15460	0.67	-0.9
3,131,263	-		A4249_RS15460	0.67	-0.1
3,131,263	-		A4249_RS15460	0.67	+0.2
3,131,263	-		A4249_RS15460	0.67	+0.3
3,131,263	-		A4249_RS15460	0.67	-0.7
3,131,274	+		A4249_RS15460	0.69	-0.1
3,131,275	-		A4249_RS15460	0.69	+0.9
3,131,275	-		A4249_RS15460	0.69	+0.0
3,131,275	-		A4249_RS15460	0.69	-1.1
3,131,276	-		A4249_RS15460	0.69	+0.1
3,131,341	+		A4249_RS15460	0.78	+0.6
3,131,341	+		A4249_RS15460	0.78	-2.3
3,131,341	+		A4249_RS15460	0.78	-0.9
3,131,341	+		A4249_RS15460	0.78	-0.1
3,131,341	+		A4249_RS15460	0.78	+0.4
3,131,341	+		A4249_RS15460	0.78	-0.8
3,131,341	+		A4249_RS15460	0.78	+0.4
3,131,341	+		A4249_RS15460	0.78	+0.0
3,131,341	+		A4249_RS15460	0.78	-0.0
3,131,341	+		A4249_RS15460	0.78	+0.7
3,131,341	+		A4249_RS15460	0.78	-0.1
3,131,341	+		A4249_RS15460	0.78	-0.4
3,131,341	+		A4249_RS15460	0.78	-0.6
3,131,341	+		A4249_RS15460	0.78	+0.2
3,131,341	+		A4249_RS15460	0.78	-0.3
3,131,341	+		A4249_RS15460	0.78	-0.7
3,131,341	+		A4249_RS15460	0.78	-0.3
3,131,341	+		A4249_RS15460	0.78	+0.5
3,131,342	-		A4249_RS15460	0.78	-1.1
3,131,342	-		A4249_RS15460	0.78	+0.4
3,131,342	-		A4249_RS15460	0.78	-0.4
3,131,342	-		A4249_RS15460	0.78	+0.1
3,131,342	-		A4249_RS15460	0.78	-0.3
3,131,342	-		A4249_RS15460	0.78	-0.5
3,131,342	-		A4249_RS15460	0.78	+0.1
3,131,342	-		A4249_RS15460	0.78	+0.4
3,131,342	-		A4249_RS15460	0.78	-0.3
3,131,342	-		A4249_RS15460	0.78	+0.1
3,131,342	-		A4249_RS15460	0.78	-1.2
3,131,342	-		A4249_RS15460	0.78	+0.9
3,131,342	-		A4249_RS15460	0.78	+0.3
3,131,342	-		A4249_RS15460	0.78	-0.4
3,131,342	-		A4249_RS15460	0.78	+0.3
3,131,342	-		A4249_RS15460	0.78	-0.5
3,131,484	+				-1.1
3,131,485	-				-0.1
3,131,485	-				-0.3
3,131,485	-				-0.6
3,131,833	+		A4249_RS15465	0.29	-0.9
3,131,833	+		A4249_RS15465	0.29	-0.1
3,131,833	+		A4249_RS15465	0.29	-1.7
3,131,834	-		A4249_RS15465	0.30	-0.5
3,131,834	-		A4249_RS15465	0.30	-0.1
3,131,834	-		A4249_RS15465	0.30	+0.7
3,131,834	-		A4249_RS15465	0.30	-0.9
3,131,834	-		A4249_RS15465	0.30	-0.3
3,131,834	-		A4249_RS15465	0.30	-0.8
3,131,834	-		A4249_RS15465	0.30	-0.3
3,131,834	-		A4249_RS15465	0.30	+0.9
3,131,834	-		A4249_RS15465	0.30	-0.4
3,131,834	-		A4249_RS15465	0.30	-1.3
3,131,993	+		A4249_RS15465	0.50	+1.0
3,131,994	-		A4249_RS15465	0.51	+0.1
3,132,071	+		A4249_RS15465	0.61	+0.2
3,132,071	+		A4249_RS15465	0.61	+0.3
3,132,071	+		A4249_RS15465	0.61	+0.7
3,132,071	+		A4249_RS15465	0.61	-0.7
3,132,071	+		A4249_RS15465	0.61	-1.2
3,132,071	+		A4249_RS15465	0.61	-0.5
3,132,071	+		A4249_RS15465	0.61	+0.3
3,132,071	+		A4249_RS15465	0.61	+1.0
3,132,072	-		A4249_RS15465	0.61	-0.3
3,132,072	-		A4249_RS15465	0.61	+0.8
3,132,072	-		A4249_RS15465	0.61	+0.7
3,132,072	-		A4249_RS15465	0.61	+0.1
3,132,072	-		A4249_RS15465	0.61	-0.1
3,132,072	-		A4249_RS15465	0.61	-0.1
3,132,072	-		A4249_RS15465	0.61	-0.5
3,132,080	+		A4249_RS15465	0.62	-0.5
3,132,080	+		A4249_RS15465	0.62	-1.5
3,132,080	+		A4249_RS15465	0.62	+0.7
3,132,080	+		A4249_RS15465	0.62	-1.9
3,132,080	+		A4249_RS15465	0.62	-0.1
3,132,080	+		A4249_RS15465	0.62	+1.9
3,132,080	+		A4249_RS15465	0.62	+0.1
3,132,081	-		A4249_RS15465	0.62	+0.0
3,132,081	-		A4249_RS15465	0.62	+0.0
3,132,081	-		A4249_RS15465	0.62	+2.1
3,132,081	-		A4249_RS15465	0.62	+0.3
3,132,081	-		A4249_RS15465	0.62	+0.0
3,132,081	-		A4249_RS15465	0.62	+1.0
3,132,081	-		A4249_RS15465	0.62	+0.4
3,132,081	-		A4249_RS15465	0.62	-0.3
3,132,081	-		A4249_RS15465	0.62	-1.4
3,132,081	-		A4249_RS15465	0.62	+0.2
3,132,081	-		A4249_RS15465	0.62	-1.2
3,132,081	-		A4249_RS15465	0.62	+1.1
3,132,098	+		A4249_RS15465	0.64	-1.4
3,132,098	+		A4249_RS15465	0.64	+0.2
3,132,099	-		A4249_RS15465	0.64	-0.1
3,132,099	-		A4249_RS15465	0.64	-1.3
3,132,099	-		A4249_RS15465	0.64	-2.2
3,132,099	-		A4249_RS15465	0.64	-1.0
3,132,308	+				-1.4
3,132,308	+				-1.0
3,132,308	+				+1.2
3,132,308	+				+1.3
3,132,309	-				-0.7
3,132,309	-				-0.9
3,132,309	-				-0.6
3,132,309	-				-1.2
3,132,609	+		A4249_RS15470	0.21	+0.0
3,132,610	-		A4249_RS15470	0.21	+0.1
3,132,714	+		A4249_RS15470	0.72	-0.0
3,132,715	-		A4249_RS15470	0.73	+0.7
3,132,768	+				-0.1
3,132,768	+				+0.0
3,132,768	+				-0.1
3,132,769	-				+0.5
3,132,793	-				+0.3
3,132,793	-				+0.2
3,132,856	+				-1.1
3,132,856	+				-1.1
3,132,856	+				-0.4
3,132,857	-				-0.0
3,132,857	-				-0.3
3,132,933	+				-0.9
3,132,948	+		A4249_RS15475	0.10	-0.3
3,132,948	+		A4249_RS15475	0.10	-0.1
3,132,948	+		A4249_RS15475	0.10	+0.8
3,132,948	+		A4249_RS15475	0.10	-0.1
3,132,948	+		A4249_RS15475	0.10	-2.5
3,132,949	-		A4249_RS15475	0.10	-0.5
3,132,949	-		A4249_RS15475	0.10	-0.7
3,132,949	-		A4249_RS15475	0.10	-0.4
3,132,949	-		A4249_RS15475	0.10	+0.0
3,133,269	+		A4249_RS15475	0.45	-0.0
3,133,283	-		A4249_RS15475	0.46	-0.5
3,133,291	+		A4249_RS15475	0.47	-0.5
3,133,291	+		A4249_RS15475	0.47	-0.6
3,133,292	-		A4249_RS15475	0.47	+0.2
3,133,292	-		A4249_RS15475	0.47	+0.2
3,133,292	-		A4249_RS15475	0.47	-0.2