Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS12540

Experiment: HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
2,514,692	+				-0.0
2,514,692	+				+0.3
2,514,692	+				+0.1
2,514,692	+				+1.5
2,514,692	+				-0.6
2,514,693	-				-0.3
2,514,693	-				-1.7
2,514,706	+				-0.2
2,515,069	+		A4249_RS12535	0.44	+0.0
2,515,070	-		A4249_RS12535	0.44	-1.0
2,515,070	-		A4249_RS12535	0.44	+0.1
2,515,070	-		A4249_RS12535	0.44	-1.9
2,515,070	-		A4249_RS12535	0.44	-0.2
2,515,291	+		A4249_RS12535	0.67	-0.8
2,515,291	+		A4249_RS12535	0.67	-1.0
2,515,292	-		A4249_RS12535	0.67	+0.5
2,515,292	-		A4249_RS12535	0.67	+0.6
2,515,292	-		A4249_RS12535	0.67	+0.2
2,515,292	-		A4249_RS12535	0.67	+0.8
2,515,385	+		A4249_RS12535	0.77	+0.1
2,515,385	+		A4249_RS12535	0.77	+1.3
2,515,385	+		A4249_RS12535	0.77	+0.0
2,515,385	+		A4249_RS12535	0.77	-0.6
2,515,385	+		A4249_RS12535	0.77	+1.0
2,515,386	-		A4249_RS12535	0.77	-0.5
2,515,450	-		A4249_RS12535	0.83	-0.2
2,515,450	-		A4249_RS12535	0.83	+1.1
2,515,483	+		A4249_RS12535	0.87	-1.0
2,515,483	+		A4249_RS12535	0.87	+0.6
2,515,517	+				-0.1
2,515,517	+				-0.3
2,515,517	+				-0.5
2,515,517	+				+0.2
2,515,517	+				-1.4
2,515,517	+				-0.2
2,515,517	+				+0.6
2,515,518	-				-0.6
2,515,518	-				+0.0
2,515,518	-				-1.1
2,515,518	-				-1.7
2,515,620	-				-0.3
2,515,620	-				+0.0
2,515,621	+				+0.4
2,515,621	+				+0.9
2,515,621	+				-0.0
2,515,622	-				-0.9
2,515,622	-				-1.1
2,515,622	-				-1.1
2,515,673	-				+1.5
2,515,683	-				-0.1
2,515,756	+		A4249_RS12540	0.10	-0.1
2,515,900	+		A4249_RS12540	0.32	+1.1
2,515,900	+		A4249_RS12540	0.32	+0.8
2,515,900	+		A4249_RS12540	0.32	+0.0
2,515,900	+		A4249_RS12540	0.32	+0.6
2,515,900	+		A4249_RS12540	0.32	-0.1
2,515,900	+		A4249_RS12540	0.32	-1.0
2,515,900	+		A4249_RS12540	0.32	-0.4
2,515,900	+		A4249_RS12540	0.32	+2.0
2,515,900	+		A4249_RS12540	0.32	-1.0
2,515,900	+		A4249_RS12540	0.32	-0.1
2,515,900	+		A4249_RS12540	0.32	+1.1
2,515,900	+		A4249_RS12540	0.32	+0.4
2,515,900	+		A4249_RS12540	0.32	+0.2
2,515,900	+		A4249_RS12540	0.32	+0.2
2,515,900	+		A4249_RS12540	0.32	-0.8
2,515,900	+		A4249_RS12540	0.32	-0.7
2,515,901	-		A4249_RS12540	0.32	+0.2
2,515,901	-		A4249_RS12540	0.32	-1.2
2,515,901	-		A4249_RS12540	0.32	+0.2
2,515,901	-		A4249_RS12540	0.32	+1.3
2,515,901	-		A4249_RS12540	0.32	+0.8
2,515,901	-		A4249_RS12540	0.32	+0.3
2,515,901	-		A4249_RS12540	0.32	-0.6
2,515,901	-		A4249_RS12540	0.32	-0.8
2,516,047	+		A4249_RS12540	0.54	+0.9
2,516,047	+		A4249_RS12540	0.54	-1.0
2,516,047	+		A4249_RS12540	0.54	-0.6
2,516,047	+		A4249_RS12540	0.54	-0.1
2,516,047	+		A4249_RS12540	0.54	+1.9
2,516,047	+		A4249_RS12540	0.54	-2.1
2,516,047	+		A4249_RS12540	0.54	+0.4
2,516,047	+		A4249_RS12540	0.54	+0.6
2,516,047	+		A4249_RS12540	0.54	-1.4
2,516,048	-		A4249_RS12540	0.55	+0.2
2,516,048	-		A4249_RS12540	0.55	-0.6
2,516,048	-		A4249_RS12540	0.55	-0.3
2,516,048	-		A4249_RS12540	0.55	+0.9
2,516,048	-		A4249_RS12540	0.55	-0.9
2,516,048	-		A4249_RS12540	0.55	+1.1
2,516,168	+		A4249_RS12540	0.73	+0.0
2,516,168	+		A4249_RS12540	0.73	+0.3
2,516,365	+				-2.7
2,516,438	+				-0.1
2,516,438	+				-1.1
2,516,438	+				-0.4
2,516,438	+				-0.3
2,516,438	+				-1.0
2,516,438	+				-0.1
2,516,439	-				+0.6
2,516,439	-				+0.2
2,516,439	-				-0.4
2,516,439	-				-0.6
2,516,439	-				+1.3
2,516,513	+				-0.2
2,516,513	+				-0.1
2,516,513	+				-1.3
2,516,513	+				-1.5
2,516,513	+				-1.3
2,516,513	+				-0.3
2,516,513	+				-0.2
2,516,514	-				+1.3
2,516,514	-				+0.3
2,516,514	-				+0.0
2,516,514	-				-1.3
2,516,514	-				+0.4
2,516,514	-				-0.3
2,516,514	-				+0.5
2,516,514	-				-1.7
2,516,514	-				+1.4
2,516,645	+		A4249_RS12545	0.20	+0.5
2,516,645	+		A4249_RS12545	0.20	-0.0
2,516,645	+		A4249_RS12545	0.20	+0.1
2,516,645	+		A4249_RS12545	0.20	-1.1
2,516,645	+		A4249_RS12545	0.20	-0.5
2,516,645	+		A4249_RS12545	0.20	-0.3
2,516,645	+		A4249_RS12545	0.20	-1.4
2,516,645	+		A4249_RS12545	0.20	+0.6
2,516,645	+		A4249_RS12545	0.20	+1.0
2,516,646	-		A4249_RS12545	0.20	-0.0
2,516,646	-		A4249_RS12545	0.20	+1.6
2,516,646	-		A4249_RS12545	0.20	-0.2
2,516,646	-		A4249_RS12545	0.20	-0.3
2,516,702	+		A4249_RS12545	0.24	-1.6
2,516,702	+		A4249_RS12545	0.24	+0.1
2,516,703	-		A4249_RS12545	0.24	-1.0
2,516,888	+		A4249_RS12545	0.39	-1.7
2,516,888	+		A4249_RS12545	0.39	-0.9
2,516,888	+		A4249_RS12545	0.39	-1.8
2,516,888	+		A4249_RS12545	0.39	-1.4
2,516,888	+		A4249_RS12545	0.39	-0.1
2,516,888	+		A4249_RS12545	0.39	+0.6
2,516,888	+		A4249_RS12545	0.39	-0.3
2,516,888	+		A4249_RS12545	0.39	+0.4
2,516,889	-		A4249_RS12545	0.39	-0.8
2,516,889	-		A4249_RS12545	0.39	-2.0
2,516,889	-		A4249_RS12545	0.39	+0.5
2,516,889	-		A4249_RS12545	0.39	+0.1
2,516,889	-		A4249_RS12545	0.39	-0.2
2,516,889	-		A4249_RS12545	0.39	-0.5
2,516,889	-		A4249_RS12545	0.39	-2.0
2,516,925	-		A4249_RS12545	0.42	-0.3
2,517,110	+		A4249_RS12545	0.56	-0.7
2,517,110	+		A4249_RS12545	0.56	-0.2
2,517,110	+		A4249_RS12545	0.56	-0.1
2,517,110	+		A4249_RS12545	0.56	+0.9
2,517,110	+		A4249_RS12545	0.56	-0.7
2,517,110	+		A4249_RS12545	0.56	-0.4
2,517,110	+		A4249_RS12545	0.56	-0.4
2,517,111	-		A4249_RS12545	0.56	+1.1
2,517,111	-		A4249_RS12545	0.56	-0.1
2,517,111	-		A4249_RS12545	0.56	-1.1
2,517,111	-		A4249_RS12545	0.56	+0.3
2,517,111	-		A4249_RS12545	0.56	+0.1
2,517,165	+		A4249_RS12545	0.60	-0.6
2,517,166	-		A4249_RS12545	0.60	-1.8
2,517,340	-		A4249_RS12545	0.74	+0.2
2,517,340	-		A4249_RS12545	0.74	+0.6