Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS10295

Experiment: HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
2,067,318	-		A4249_RS10290	0.44	+1.6
2,067,318	-		A4249_RS10290	0.44	+1.9
2,067,318	-		A4249_RS10290	0.44	-0.8
2,067,421	+		A4249_RS10290	0.52	+1.4
2,067,421	+		A4249_RS10290	0.52	+0.8
2,067,421	+		A4249_RS10290	0.52	-0.2
2,067,421	+		A4249_RS10290	0.52	+1.1
2,067,421	+		A4249_RS10290	0.52	-0.8
2,067,422	-		A4249_RS10290	0.52	+0.9
2,067,422	-		A4249_RS10290	0.52	+1.3
2,067,422	-		A4249_RS10290	0.52	+1.1
2,067,422	-		A4249_RS10290	0.52	+0.9
2,067,422	-		A4249_RS10290	0.52	-0.3
2,067,422	-		A4249_RS10290	0.52	+0.6
2,067,422	-		A4249_RS10290	0.52	+0.3
2,067,423	+		A4249_RS10290	0.52	+0.1
2,067,423	+		A4249_RS10290	0.52	+0.5
2,067,423	+		A4249_RS10290	0.52	-0.9
2,067,423	+		A4249_RS10290	0.52	+1.6
2,067,423	+		A4249_RS10290	0.52	+0.8
2,067,424	-		A4249_RS10290	0.52	-2.8
2,067,424	-		A4249_RS10290	0.52	+1.4
2,067,424	-		A4249_RS10290	0.52	+0.4
2,067,424	-		A4249_RS10290	0.52	+0.2
2,067,424	-		A4249_RS10290	0.52	+0.4
2,067,424	-		A4249_RS10290	0.52	+0.4
2,067,424	-		A4249_RS10290	0.52	+1.5
2,067,424	-		A4249_RS10290	0.52	+0.4
2,067,445	+		A4249_RS10290	0.54	+0.0
2,067,446	-		A4249_RS10290	0.54	+0.1
2,067,446	-		A4249_RS10290	0.54	+0.5
2,067,446	-		A4249_RS10290	0.54	+0.7
2,067,559	+		A4249_RS10290	0.62	+0.9
2,067,559	+		A4249_RS10290	0.62	+0.1
2,067,559	+		A4249_RS10290	0.62	+1.0
2,067,559	+		A4249_RS10290	0.62	-0.1
2,067,560	-		A4249_RS10290	0.62	+0.8
2,067,560	-		A4249_RS10290	0.62	+0.5
2,067,878	-		A4249_RS10290	0.86	+2.0
2,067,885	+		A4249_RS10290	0.86	-0.5
2,067,914	-		A4249_RS10290	0.88	-1.0
2,068,074	+				+0.7
2,068,075	-				+0.7
2,068,075	-				-0.1
2,068,075	-				+0.1
2,068,075	-				-0.6
2,068,075	-				-0.4
2,068,075	-				+1.1
2,068,075	-				+1.4
2,068,115	+				-1.3
2,068,116	+				+1.7
2,068,116	+				-0.7
2,068,116	+				+1.9
2,068,116	+				+0.6
2,068,116	+				+0.7
2,068,116	+				-1.3
2,068,116	+				-1.4
2,068,117	-				+0.9
2,068,117	-				+0.1
2,068,117	-				-0.3
2,068,117	-				+0.0
2,068,117	-				-1.6
2,068,117	-				+0.0
2,068,266	+		A4249_RS10295	0.46	+0.0
2,068,267	-		A4249_RS10295	0.46	+0.7
2,068,267	-		A4249_RS10295	0.46	-0.2
2,068,503	+				-1.1
2,068,503	+				+1.1
2,068,503	+				+1.7
2,068,503	+				+0.1
2,068,504	-				+0.1
2,068,504	-				+0.3
2,068,504	-				-1.0
2,068,504	-				+0.1
2,068,504	-				+0.0
2,068,504	-				+1.3
2,068,759	+		A4249_RS10300	0.21	+0.9
2,068,759	+		A4249_RS10300	0.21	-0.1
2,068,759	+		A4249_RS10300	0.21	-0.2
2,068,759	+		A4249_RS10300	0.21	-0.2
2,068,759	+		A4249_RS10300	0.21	+0.4
2,068,759	+		A4249_RS10300	0.21	+0.1
2,068,759	+		A4249_RS10300	0.21	+1.4
2,068,759	+		A4249_RS10300	0.21	-0.1
2,068,759	+		A4249_RS10300	0.21	-0.9
2,068,759	+		A4249_RS10300	0.21	+1.3
2,068,759	+		A4249_RS10300	0.21	-0.9
2,068,759	+		A4249_RS10300	0.21	+0.5
2,068,759	+		A4249_RS10300	0.21	+1.0
2,068,759	+		A4249_RS10300	0.21	+0.3
2,068,760	-		A4249_RS10300	0.21	+0.3
2,068,760	-		A4249_RS10300	0.21	-0.3
2,068,760	-		A4249_RS10300	0.21	-0.3
2,068,760	-		A4249_RS10300	0.21	-0.2
2,068,760	-		A4249_RS10300	0.21	-1.4
2,068,760	-		A4249_RS10300	0.21	-0.0
2,068,760	-		A4249_RS10300	0.21	-0.9
2,068,760	-		A4249_RS10300	0.21	+0.4
2,068,760	-		A4249_RS10300	0.21	-0.4
2,068,760	-		A4249_RS10300	0.21	-0.3
2,068,868	-		A4249_RS10300	0.32	+1.7
2,068,933	+		A4249_RS10300	0.38	+0.2
2,068,933	+		A4249_RS10300	0.38	+0.8
2,068,933	+		A4249_RS10300	0.38	-0.9
2,068,933	+		A4249_RS10300	0.38	+0.6
2,068,933	+		A4249_RS10300	0.38	-0.6
2,068,933	+		A4249_RS10300	0.38	-1.1
2,068,934	-		A4249_RS10300	0.38	+0.6
2,068,934	-		A4249_RS10300	0.38	-2.2
2,068,935	+		A4249_RS10300	0.38	-0.2
2,068,935	+		A4249_RS10300	0.38	-0.3
2,068,936	-		A4249_RS10300	0.38	-2.4
2,068,936	-		A4249_RS10300	0.38	+0.1
2,069,062	+		A4249_RS10300	0.50	-1.1
2,069,062	+		A4249_RS10300	0.50	-0.5
2,069,062	+		A4249_RS10300	0.50	+2.1
2,069,062	+		A4249_RS10300	0.50	-1.1
2,069,062	+		A4249_RS10300	0.50	-1.2
2,069,062	+		A4249_RS10300	0.50	-1.3
2,069,062	+		A4249_RS10300	0.50	-0.0
2,069,062	+		A4249_RS10300	0.50	+0.3
2,069,063	-		A4249_RS10300	0.50	+0.1
2,069,063	-		A4249_RS10300	0.50	-0.3
2,069,063	-		A4249_RS10300	0.50	-0.2
2,069,064	+		A4249_RS10300	0.50	-1.3
2,069,065	-		A4249_RS10300	0.50	-0.2
2,069,128	+		A4249_RS10300	0.56	-1.2
2,069,128	+		A4249_RS10300	0.56	+1.5
2,069,129	-		A4249_RS10300	0.56	+0.8
2,069,129	-		A4249_RS10300	0.56	-0.5
2,069,129	-		A4249_RS10300	0.56	-0.4
2,069,269	+		A4249_RS10300	0.69	+0.0
2,069,269	+		A4249_RS10300	0.69	-0.3
2,069,269	+		A4249_RS10300	0.69	+0.2
2,069,269	+		A4249_RS10300	0.69	-0.4
2,069,269	+		A4249_RS10300	0.69	-0.3
2,069,269	+		A4249_RS10300	0.69	+0.2
2,069,270	-		A4249_RS10300	0.69	-0.2
2,069,270	-		A4249_RS10300	0.69	-0.6
2,069,270	-		A4249_RS10300	0.69	+0.1
2,069,270	-		A4249_RS10300	0.69	+0.6
2,069,270	-		A4249_RS10300	0.69	-0.3
2,069,270	-		A4249_RS10300	0.69	+0.1
2,069,271	+		A4249_RS10300	0.69	+0.5
2,069,271	+		A4249_RS10300	0.69	-1.4
2,069,271	+		A4249_RS10300	0.69	-0.4
2,069,271	+		A4249_RS10300	0.69	+0.5
2,069,271	+		A4249_RS10300	0.69	-0.3
2,069,271	+		A4249_RS10300	0.69	-0.7
2,069,271	+		A4249_RS10300	0.69	+0.1
2,069,271	+		A4249_RS10300	0.69	+0.1
2,069,272	-		A4249_RS10300	0.69	+1.9
2,069,272	-		A4249_RS10300	0.69	-0.3
2,069,272	-		A4249_RS10300	0.69	+0.6
2,069,272	-		A4249_RS10300	0.69	+0.4
2,069,272	-		A4249_RS10300	0.69	+1.2
2,069,272	-		A4249_RS10300	0.69	+0.1