Experiment: HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS01480 and A4249_RS01485 overlap by 4 nucleotides A4249_RS01485 and A4249_RS01490 overlap by 4 nucleotides A4249_RS01490 and A4249_RS01495 overlap by 4 nucleotides
A4249_RS01480: A4249_RS01480 - cell division protein MraZ, at 273,863 to 274,339
_RS01480
A4249_RS01485: A4249_RS01485 - 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH, at 274,336 to 275,316
_RS01485
A4249_RS01490: A4249_RS01490 - cell division protein, at 275,313 to 275,762
_RS01490
A4249_RS01495: A4249_RS01495 - penicillin-binding protein 2, at 275,759 to 277,543
_RS01495
Position (kb) 274
275
276 Strain fitness (log2 ratio) -2
-1
0
1 at 273.378 kb on - strand at 273.378 kb on - strand at 273.378 kb on - strand at 273.378 kb on - strand at 273.378 kb on - strand at 273.394 kb on - strand at 273.433 kb on - strand at 273.492 kb on - strand at 273.492 kb on - strand at 273.504 kb on + strand at 273.504 kb on + strand at 273.505 kb on - strand at 273.505 kb on - strand at 273.505 kb on - strand at 273.541 kb on + strand at 273.541 kb on + strand at 273.613 kb on - strand at 273.633 kb on + strand at 273.633 kb on + strand at 273.633 kb on + strand at 273.633 kb on + strand at 273.633 kb on + strand at 273.633 kb on + strand at 273.633 kb on + strand at 273.634 kb on - strand at 273.656 kb on + strand at 273.656 kb on + strand at 273.657 kb on - strand at 273.657 kb on - strand at 273.657 kb on - strand at 273.657 kb on - strand at 273.657 kb on - strand at 273.674 kb on + strand at 273.699 kb on + strand at 273.699 kb on + strand at 273.699 kb on + strand at 273.699 kb on + strand at 273.700 kb on - strand at 273.700 kb on - strand at 273.700 kb on - strand at 274.115 kb on + strand, within A4249_RS01480 at 274.132 kb on + strand, within A4249_RS01480
Per-strain Table
Position Strand Gene LocusTag Fraction HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C) remove 273,378 - +0.1 273,378 - -0.4 273,378 - -1.4 273,378 - +0.3 273,378 - +0.2 273,394 - +0.2 273,433 - -1.9 273,492 - -1.0 273,492 - -0.7 273,504 + +0.4 273,504 + -0.0 273,505 - -1.0 273,505 - +0.7 273,505 - -0.8 273,541 + -0.1 273,541 + +0.9 273,613 - +0.5 273,633 + +0.1 273,633 + +0.5 273,633 + -0.5 273,633 + -0.8 273,633 + -0.3 273,633 + +0.6 273,633 + +0.7 273,634 - -0.4 273,656 + +0.1 273,656 + +0.9 273,657 - -0.4 273,657 - -0.3 273,657 - +0.5 273,657 - +0.7 273,657 - -0.1 273,674 + +0.8 273,699 + -0.7 273,699 + -0.0 273,699 + -0.0 273,699 + -0.0 273,700 - -0.1 273,700 - +0.0 273,700 - +0.1 274,115 + A4249_RS01480 0.53 +0.7 274,132 + A4249_RS01480 0.56 -0.1
Or see this region's nucleotide sequence