Experiment: D-Maltose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_05609 and BACOVA_05610 are separated by 13 nucleotides BACOVA_05610 and BACOVA_05611 are separated by 336 nucleotides
BACOVA_05609: BACOVA_05609 - hypothetical protein, at 1,126,625 to 1,127,995
_05609
BACOVA_05610: BACOVA_05610 - phosphate-selective porin O and P, at 1,128,009 to 1,129,154
_05610
BACOVA_05611: BACOVA_05611 - glycosyl hydrolase family 49, at 1,129,491 to 1,130,903
_05611
Position (kb)
1128
1129
1130 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1127.023 kb on + strand, within BACOVA_05609 at 1127.093 kb on - strand, within BACOVA_05609 at 1127.137 kb on + strand, within BACOVA_05609 at 1127.137 kb on + strand, within BACOVA_05609 at 1127.215 kb on + strand, within BACOVA_05609 at 1127.215 kb on + strand, within BACOVA_05609 at 1127.216 kb on - strand, within BACOVA_05609 at 1127.216 kb on - strand, within BACOVA_05609 at 1127.251 kb on + strand, within BACOVA_05609 at 1127.251 kb on + strand, within BACOVA_05609 at 1127.253 kb on + strand, within BACOVA_05609 at 1127.254 kb on - strand, within BACOVA_05609 at 1127.317 kb on + strand, within BACOVA_05609 at 1127.318 kb on - strand, within BACOVA_05609 at 1127.331 kb on + strand, within BACOVA_05609 at 1127.335 kb on - strand, within BACOVA_05609 at 1127.344 kb on - strand, within BACOVA_05609 at 1127.348 kb on - strand, within BACOVA_05609 at 1127.352 kb on + strand, within BACOVA_05609 at 1127.352 kb on + strand, within BACOVA_05609 at 1127.353 kb on - strand, within BACOVA_05609 at 1127.369 kb on - strand, within BACOVA_05609 at 1127.401 kb on + strand, within BACOVA_05609 at 1127.407 kb on + strand, within BACOVA_05609 at 1127.447 kb on - strand, within BACOVA_05609 at 1127.460 kb on + strand, within BACOVA_05609 at 1127.504 kb on - strand, within BACOVA_05609 at 1127.508 kb on + strand, within BACOVA_05609 at 1127.566 kb on + strand, within BACOVA_05609 at 1127.639 kb on - strand, within BACOVA_05609 at 1127.645 kb on + strand, within BACOVA_05609 at 1127.698 kb on - strand, within BACOVA_05609 at 1127.747 kb on - strand, within BACOVA_05609 at 1127.758 kb on - strand, within BACOVA_05609 at 1127.758 kb on - strand, within BACOVA_05609 at 1127.814 kb on - strand, within BACOVA_05609 at 1127.819 kb on - strand, within BACOVA_05609 at 1127.819 kb on - strand, within BACOVA_05609 at 1127.820 kb on + strand, within BACOVA_05609 at 1127.821 kb on - strand, within BACOVA_05609 at 1127.821 kb on - strand, within BACOVA_05609 at 1127.835 kb on + strand, within BACOVA_05609 at 1127.835 kb on + strand, within BACOVA_05609 at 1127.835 kb on + strand, within BACOVA_05609 at 1127.849 kb on - strand, within BACOVA_05609 at 1127.876 kb on + strand at 1127.877 kb on - strand at 1127.893 kb on + strand at 1128.017 kb on - strand at 1128.020 kb on - strand at 1128.027 kb on + strand at 1128.028 kb on - strand at 1128.050 kb on - strand at 1128.056 kb on - strand at 1128.103 kb on + strand at 1128.111 kb on - strand at 1128.111 kb on - strand at 1128.127 kb on + strand, within BACOVA_05610 at 1128.127 kb on + strand, within BACOVA_05610 at 1128.128 kb on - strand, within BACOVA_05610 at 1128.128 kb on - strand, within BACOVA_05610 at 1128.209 kb on - strand, within BACOVA_05610 at 1128.215 kb on + strand, within BACOVA_05610 at 1128.219 kb on + strand, within BACOVA_05610 at 1128.220 kb on - strand, within BACOVA_05610 at 1128.220 kb on - strand, within BACOVA_05610 at 1128.268 kb on + strand, within BACOVA_05610 at 1128.269 kb on - strand, within BACOVA_05610 at 1128.308 kb on + strand, within BACOVA_05610 at 1128.309 kb on - strand, within BACOVA_05610 at 1128.309 kb on - strand, within BACOVA_05610 at 1128.362 kb on + strand, within BACOVA_05610 at 1128.428 kb on + strand, within BACOVA_05610 at 1128.429 kb on - strand, within BACOVA_05610 at 1128.429 kb on - strand, within BACOVA_05610 at 1128.436 kb on + strand, within BACOVA_05610 at 1128.442 kb on - strand, within BACOVA_05610 at 1128.448 kb on - strand, within BACOVA_05610 at 1128.460 kb on - strand, within BACOVA_05610 at 1128.553 kb on - strand, within BACOVA_05610 at 1128.587 kb on + strand, within BACOVA_05610 at 1128.589 kb on + strand, within BACOVA_05610 at 1128.595 kb on + strand, within BACOVA_05610 at 1128.612 kb on - strand, within BACOVA_05610 at 1128.651 kb on - strand, within BACOVA_05610 at 1128.661 kb on - strand, within BACOVA_05610 at 1128.696 kb on - strand, within BACOVA_05610 at 1128.696 kb on - strand, within BACOVA_05610 at 1128.715 kb on + strand, within BACOVA_05610 at 1128.771 kb on - strand, within BACOVA_05610 at 1128.792 kb on + strand, within BACOVA_05610 at 1128.808 kb on + strand, within BACOVA_05610 at 1128.834 kb on + strand, within BACOVA_05610 at 1128.835 kb on - strand, within BACOVA_05610 at 1128.837 kb on - strand, within BACOVA_05610 at 1128.852 kb on + strand, within BACOVA_05610 at 1128.853 kb on - strand, within BACOVA_05610 at 1128.853 kb on - strand, within BACOVA_05610 at 1128.853 kb on - strand, within BACOVA_05610 at 1128.853 kb on - strand, within BACOVA_05610 at 1128.872 kb on - strand, within BACOVA_05610 at 1128.888 kb on + strand, within BACOVA_05610 at 1128.888 kb on + strand, within BACOVA_05610 at 1128.889 kb on - strand, within BACOVA_05610 at 1128.889 kb on - strand, within BACOVA_05610 at 1128.892 kb on + strand, within BACOVA_05610 at 1128.908 kb on - strand, within BACOVA_05610 at 1128.946 kb on + strand, within BACOVA_05610 at 1128.946 kb on + strand, within BACOVA_05610 at 1128.947 kb on - strand, within BACOVA_05610 at 1128.989 kb on - strand, within BACOVA_05610 at 1129.029 kb on + strand, within BACOVA_05610 at 1129.030 kb on - strand, within BACOVA_05610 at 1129.033 kb on - strand, within BACOVA_05610 at 1129.033 kb on - strand, within BACOVA_05610 at 1129.034 kb on + strand, within BACOVA_05610 at 1129.035 kb on - strand, within BACOVA_05610 at 1129.040 kb on + strand at 1129.040 kb on + strand at 1129.065 kb on + strand at 1129.065 kb on + strand at 1129.066 kb on - strand at 1129.066 kb on - strand at 1129.066 kb on - strand at 1129.071 kb on + strand at 1129.071 kb on + strand at 1129.091 kb on + strand at 1129.127 kb on - strand at 1129.147 kb on + strand at 1129.148 kb on - strand at 1129.148 kb on - strand at 1129.148 kb on - strand at 1129.183 kb on - strand at 1129.183 kb on - strand at 1129.183 kb on - strand at 1129.205 kb on - strand at 1129.205 kb on - strand at 1129.263 kb on + strand at 1129.275 kb on + strand at 1129.280 kb on - strand at 1129.321 kb on + strand at 1129.321 kb on + strand at 1129.322 kb on - strand at 1129.325 kb on + strand at 1129.326 kb on - strand at 1129.349 kb on - strand at 1129.356 kb on - strand at 1129.379 kb on - strand at 1129.432 kb on - strand at 1129.434 kb on - strand at 1129.474 kb on + strand at 1129.479 kb on + strand at 1129.497 kb on - strand at 1129.499 kb on - strand at 1129.501 kb on + strand at 1129.501 kb on + strand at 1129.540 kb on + strand at 1129.541 kb on - strand at 1129.541 kb on - strand at 1129.544 kb on + strand at 1129.544 kb on + strand at 1129.545 kb on - strand at 1129.545 kb on - strand at 1129.616 kb on + strand at 1129.616 kb on + strand at 1129.616 kb on + strand at 1129.627 kb on - strand at 1129.629 kb on - strand at 1129.640 kb on - strand, within BACOVA_05611 at 1129.670 kb on - strand, within BACOVA_05611 at 1129.690 kb on + strand, within BACOVA_05611 at 1129.695 kb on - strand, within BACOVA_05611 at 1129.705 kb on + strand, within BACOVA_05611 at 1129.735 kb on + strand, within BACOVA_05611 at 1129.747 kb on + strand, within BACOVA_05611 at 1129.810 kb on + strand, within BACOVA_05611 at 1129.810 kb on + strand, within BACOVA_05611 at 1129.811 kb on - strand, within BACOVA_05611 at 1129.814 kb on + strand, within BACOVA_05611 at 1129.814 kb on + strand, within BACOVA_05611 at 1129.815 kb on - strand, within BACOVA_05611 at 1129.815 kb on - strand, within BACOVA_05611 at 1129.815 kb on - strand, within BACOVA_05611 at 1129.815 kb on - strand, within BACOVA_05611 at 1129.816 kb on + strand, within BACOVA_05611 at 1129.817 kb on - strand, within BACOVA_05611 at 1129.817 kb on - strand, within BACOVA_05611 at 1129.817 kb on - strand, within BACOVA_05611 at 1129.817 kb on - strand, within BACOVA_05611 at 1129.824 kb on - strand, within BACOVA_05611 at 1129.923 kb on - strand, within BACOVA_05611 at 1129.945 kb on - strand, within BACOVA_05611 at 1129.966 kb on + strand, within BACOVA_05611 at 1129.967 kb on - strand, within BACOVA_05611 at 1129.972 kb on - strand, within BACOVA_05611 at 1130.020 kb on + strand, within BACOVA_05611 at 1130.020 kb on + strand, within BACOVA_05611 at 1130.021 kb on - strand, within BACOVA_05611 at 1130.046 kb on + strand, within BACOVA_05611 at 1130.068 kb on + strand, within BACOVA_05611 at 1130.069 kb on - strand, within BACOVA_05611
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose 10 mM (C) remove 1,127,023 + BACOVA_05609 0.29 +0.5 1,127,093 - BACOVA_05609 0.34 -0.3 1,127,137 + BACOVA_05609 0.37 +0.2 1,127,137 + BACOVA_05609 0.37 -2.1 1,127,215 + BACOVA_05609 0.43 -0.5 1,127,215 + BACOVA_05609 0.43 -0.9 1,127,216 - BACOVA_05609 0.43 +0.5 1,127,216 - BACOVA_05609 0.43 +0.7 1,127,251 + BACOVA_05609 0.46 +0.7 1,127,251 + BACOVA_05609 0.46 +1.0 1,127,253 + BACOVA_05609 0.46 -0.2 1,127,254 - BACOVA_05609 0.46 +0.6 1,127,317 + BACOVA_05609 0.50 +0.6 1,127,318 - BACOVA_05609 0.51 -0.5 1,127,331 + BACOVA_05609 0.51 -0.3 1,127,335 - BACOVA_05609 0.52 -1.5 1,127,344 - BACOVA_05609 0.52 +0.8 1,127,348 - BACOVA_05609 0.53 +1.1 1,127,352 + BACOVA_05609 0.53 -0.3 1,127,352 + BACOVA_05609 0.53 -1.1 1,127,353 - BACOVA_05609 0.53 +2.3 1,127,369 - BACOVA_05609 0.54 -0.4 1,127,401 + BACOVA_05609 0.57 -0.7 1,127,407 + BACOVA_05609 0.57 -0.3 1,127,447 - BACOVA_05609 0.60 +0.2 1,127,460 + BACOVA_05609 0.61 +0.3 1,127,504 - BACOVA_05609 0.64 +1.5 1,127,508 + BACOVA_05609 0.64 +0.3 1,127,566 + BACOVA_05609 0.69 +0.7 1,127,639 - BACOVA_05609 0.74 +0.2 1,127,645 + BACOVA_05609 0.74 -0.3 1,127,698 - BACOVA_05609 0.78 -0.5 1,127,747 - BACOVA_05609 0.82 +0.7 1,127,758 - BACOVA_05609 0.83 +0.7 1,127,758 - BACOVA_05609 0.83 +0.2 1,127,814 - BACOVA_05609 0.87 +0.5 1,127,819 - BACOVA_05609 0.87 -0.3 1,127,819 - BACOVA_05609 0.87 -1.6 1,127,820 + BACOVA_05609 0.87 +0.7 1,127,821 - BACOVA_05609 0.87 -0.5 1,127,821 - BACOVA_05609 0.87 -0.4 1,127,835 + BACOVA_05609 0.88 -0.3 1,127,835 + BACOVA_05609 0.88 -0.3 1,127,835 + BACOVA_05609 0.88 +1.7 1,127,849 - BACOVA_05609 0.89 -0.2 1,127,876 + +0.7 1,127,877 - +0.2 1,127,893 + +1.7 1,128,017 - -0.3 1,128,020 - +0.2 1,128,027 + -0.4 1,128,028 - -0.1 1,128,050 - -0.3 1,128,056 - -0.1 1,128,103 + -0.6 1,128,111 - +1.0 1,128,111 - +0.1 1,128,127 + BACOVA_05610 0.10 -0.4 1,128,127 + BACOVA_05610 0.10 -0.5 1,128,128 - BACOVA_05610 0.10 +0.5 1,128,128 - BACOVA_05610 0.10 -0.0 1,128,209 - BACOVA_05610 0.17 -0.8 1,128,215 + BACOVA_05610 0.18 -1.3 1,128,219 + BACOVA_05610 0.18 +0.1 1,128,220 - BACOVA_05610 0.18 +1.3 1,128,220 - BACOVA_05610 0.18 -0.7 1,128,268 + BACOVA_05610 0.23 +0.4 1,128,269 - BACOVA_05610 0.23 +0.3 1,128,308 + BACOVA_05610 0.26 +0.2 1,128,309 - BACOVA_05610 0.26 -1.3 1,128,309 - BACOVA_05610 0.26 +0.7 1,128,362 + BACOVA_05610 0.31 -0.9 1,128,428 + BACOVA_05610 0.37 -0.1 1,128,429 - BACOVA_05610 0.37 +1.0 1,128,429 - BACOVA_05610 0.37 +0.4 1,128,436 + BACOVA_05610 0.37 -0.3 1,128,442 - BACOVA_05610 0.38 -0.3 1,128,448 - BACOVA_05610 0.38 +0.3 1,128,460 - BACOVA_05610 0.39 +0.7 1,128,553 - BACOVA_05610 0.47 +0.6 1,128,587 + BACOVA_05610 0.50 +0.3 1,128,589 + BACOVA_05610 0.51 +0.1 1,128,595 + BACOVA_05610 0.51 -0.5 1,128,612 - BACOVA_05610 0.53 +0.7 1,128,651 - BACOVA_05610 0.56 -0.1 1,128,661 - BACOVA_05610 0.57 +0.1 1,128,696 - BACOVA_05610 0.60 -0.0 1,128,696 - BACOVA_05610 0.60 -0.0 1,128,715 + BACOVA_05610 0.62 -0.3 1,128,771 - BACOVA_05610 0.66 -0.6 1,128,792 + BACOVA_05610 0.68 -0.6 1,128,808 + BACOVA_05610 0.70 +0.1 1,128,834 + BACOVA_05610 0.72 +2.9 1,128,835 - BACOVA_05610 0.72 -0.6 1,128,837 - BACOVA_05610 0.72 +0.3 1,128,852 + BACOVA_05610 0.74 +0.9 1,128,853 - BACOVA_05610 0.74 +0.0 1,128,853 - BACOVA_05610 0.74 -0.3 1,128,853 - BACOVA_05610 0.74 +0.5 1,128,853 - BACOVA_05610 0.74 -0.0 1,128,872 - BACOVA_05610 0.75 +0.2 1,128,888 + BACOVA_05610 0.77 +0.2 1,128,888 + BACOVA_05610 0.77 -0.1 1,128,889 - BACOVA_05610 0.77 -0.3 1,128,889 - BACOVA_05610 0.77 +0.1 1,128,892 + BACOVA_05610 0.77 +1.5 1,128,908 - BACOVA_05610 0.78 +0.1 1,128,946 + BACOVA_05610 0.82 -1.1 1,128,946 + BACOVA_05610 0.82 -1.5 1,128,947 - BACOVA_05610 0.82 +1.1 1,128,989 - BACOVA_05610 0.86 -1.6 1,129,029 + BACOVA_05610 0.89 -0.4 1,129,030 - BACOVA_05610 0.89 -0.9 1,129,033 - BACOVA_05610 0.89 +1.2 1,129,033 - BACOVA_05610 0.89 -0.3 1,129,034 + BACOVA_05610 0.89 +1.5 1,129,035 - BACOVA_05610 0.90 -0.1 1,129,040 + -0.4 1,129,040 + +0.6 1,129,065 + -0.0 1,129,065 + +0.3 1,129,066 - -0.6 1,129,066 - +0.2 1,129,066 - +0.7 1,129,071 + -0.5 1,129,071 + +0.8 1,129,091 + +0.4 1,129,127 - +0.9 1,129,147 + +0.5 1,129,148 - -0.6 1,129,148 - +1.0 1,129,148 - +0.6 1,129,183 - -0.1 1,129,183 - -1.9 1,129,183 - +0.7 1,129,205 - -1.1 1,129,205 - +1.4 1,129,263 + -0.9 1,129,275 + -2.4 1,129,280 - -1.9 1,129,321 + +0.2 1,129,321 + -0.0 1,129,322 - +0.7 1,129,325 + -0.3 1,129,326 - -0.1 1,129,349 - -0.4 1,129,356 - -0.7 1,129,379 - +0.7 1,129,432 - +0.0 1,129,434 - +0.7 1,129,474 + +3.0 1,129,479 + -0.0 1,129,497 - -1.3 1,129,499 - +0.4 1,129,501 + -0.4 1,129,501 + -0.3 1,129,540 + +0.2 1,129,541 - -1.6 1,129,541 - +0.7 1,129,544 + -1.3 1,129,544 + +0.1 1,129,545 - -1.3 1,129,545 - +1.0 1,129,616 + -0.1 1,129,616 + +0.7 1,129,616 + +1.4 1,129,627 - -0.6 1,129,629 - -0.3 1,129,640 - BACOVA_05611 0.11 +0.7 1,129,670 - BACOVA_05611 0.13 +0.6 1,129,690 + BACOVA_05611 0.14 -0.2 1,129,695 - BACOVA_05611 0.14 +1.1 1,129,705 + BACOVA_05611 0.15 -0.3 1,129,735 + BACOVA_05611 0.17 -0.2 1,129,747 + BACOVA_05611 0.18 +0.5 1,129,810 + BACOVA_05611 0.23 +0.3 1,129,810 + BACOVA_05611 0.23 -0.1 1,129,811 - BACOVA_05611 0.23 +0.3 1,129,814 + BACOVA_05611 0.23 +0.1 1,129,814 + BACOVA_05611 0.23 -0.2 1,129,815 - BACOVA_05611 0.23 -1.9 1,129,815 - BACOVA_05611 0.23 +0.4 1,129,815 - BACOVA_05611 0.23 +0.5 1,129,815 - BACOVA_05611 0.23 +0.3 1,129,816 + BACOVA_05611 0.23 +0.1 1,129,817 - BACOVA_05611 0.23 +1.1 1,129,817 - BACOVA_05611 0.23 -1.4 1,129,817 - BACOVA_05611 0.23 -0.4 1,129,817 - BACOVA_05611 0.23 -0.5 1,129,824 - BACOVA_05611 0.24 -0.3 1,129,923 - BACOVA_05611 0.31 +0.3 1,129,945 - BACOVA_05611 0.32 -0.4 1,129,966 + BACOVA_05611 0.34 +0.4 1,129,967 - BACOVA_05611 0.34 +0.6 1,129,972 - BACOVA_05611 0.34 +1.7 1,130,020 + BACOVA_05611 0.37 +0.3 1,130,020 + BACOVA_05611 0.37 +1.3 1,130,021 - BACOVA_05611 0.38 -0.3 1,130,046 + BACOVA_05611 0.39 -0.5 1,130,068 + BACOVA_05611 0.41 +0.1 1,130,069 - BACOVA_05611 0.41 +0.8
Or see this region's nucleotide sequence