Experiment: D-Maltose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_04460 and BACOVA_04461 are separated by 10 nucleotides BACOVA_04461 and BACOVA_04463 are separated by 14 nucleotides BACOVA_04463 and BACOVA_04462 overlap by 2 nucleotides
BACOVA_04460: BACOVA_04460 - hypothetical protein, at 372,959 to 373,504
_04460
BACOVA_04461: BACOVA_04461 - translocator protein, LysE family, at 373,515 to 374,267
_04461
BACOVA_04463: BACOVA_04463 - hypothetical protein, at 374,282 to 374,428
_04463
BACOVA_04462: BACOVA_04462 - putative phosphoribosylformylglycinamidine synthase, at 374,427 to 378,131
_04462
Position (kb) 374
375 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 373.389 kb on - strand, within BACOVA_04460 at 373.448 kb on - strand, within BACOVA_04460 at 373.510 kb on - strand at 373.510 kb on - strand at 373.517 kb on - strand at 373.520 kb on - strand at 374.207 kb on - strand at 374.207 kb on - strand at 374.209 kb on - strand at 374.238 kb on - strand at 374.239 kb on + strand at 374.239 kb on + strand at 374.240 kb on - strand at 374.242 kb on - strand at 374.242 kb on - strand at 374.252 kb on + strand at 374.253 kb on - strand at 374.263 kb on + strand at 374.264 kb on - strand at 374.274 kb on + strand at 374.274 kb on + strand at 374.280 kb on + strand at 374.280 kb on + strand at 374.284 kb on - strand at 374.287 kb on + strand at 374.287 kb on + strand at 374.292 kb on + strand at 374.339 kb on + strand, within BACOVA_04463 at 374.339 kb on + strand, within BACOVA_04463 at 374.419 kb on + strand at 374.421 kb on + strand at 374.422 kb on - strand at 374.507 kb on + strand at 374.508 kb on - strand at 374.650 kb on + strand at 374.650 kb on + strand at 374.651 kb on - strand at 374.651 kb on - strand at 374.667 kb on + strand at 374.679 kb on - strand at 374.721 kb on + strand at 374.778 kb on + strand at 374.779 kb on - strand at 374.779 kb on - strand at 374.857 kb on + strand, within BACOVA_04462 at 374.858 kb on - strand, within BACOVA_04462 at 374.858 kb on - strand, within BACOVA_04462 at 374.896 kb on + strand, within BACOVA_04462 at 374.897 kb on - strand, within BACOVA_04462 at 374.957 kb on + strand, within BACOVA_04462 at 375.002 kb on + strand, within BACOVA_04462 at 375.011 kb on + strand, within BACOVA_04462 at 375.011 kb on + strand, within BACOVA_04462 at 375.034 kb on + strand, within BACOVA_04462 at 375.045 kb on + strand, within BACOVA_04462 at 375.048 kb on - strand, within BACOVA_04462 at 375.053 kb on + strand, within BACOVA_04462 at 375.058 kb on + strand, within BACOVA_04462 at 375.059 kb on - strand, within BACOVA_04462 at 375.131 kb on - strand, within BACOVA_04462 at 375.149 kb on + strand, within BACOVA_04462 at 375.150 kb on - strand, within BACOVA_04462 at 375.182 kb on + strand, within BACOVA_04462 at 375.186 kb on - strand, within BACOVA_04462 at 375.242 kb on + strand, within BACOVA_04462 at 375.255 kb on - strand, within BACOVA_04462 at 375.279 kb on - strand, within BACOVA_04462 at 375.288 kb on + strand, within BACOVA_04462 at 375.289 kb on - strand, within BACOVA_04462 at 375.289 kb on - strand, within BACOVA_04462 at 375.360 kb on + strand, within BACOVA_04462 at 375.383 kb on + strand, within BACOVA_04462 at 375.384 kb on - strand, within BACOVA_04462 at 375.384 kb on - strand, within BACOVA_04462
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose 10 mM (C) remove 373,389 - BACOVA_04460 0.79 +1.7 373,448 - BACOVA_04460 0.90 +1.0 373,510 - -1.2 373,510 - +0.2 373,517 - -0.3 373,520 - +0.3 374,207 - +1.3 374,207 - +1.1 374,209 - +0.8 374,238 - -1.9 374,239 + +0.3 374,239 + +0.2 374,240 - -0.6 374,242 - +0.3 374,242 - -0.4 374,252 + +0.2 374,253 - +1.0 374,263 + +0.5 374,264 - +1.1 374,274 + +0.5 374,274 + -0.9 374,280 + -0.5 374,280 + -0.7 374,284 - +1.3 374,287 + -0.4 374,287 + -0.1 374,292 + +0.1 374,339 + BACOVA_04463 0.39 -0.8 374,339 + BACOVA_04463 0.39 -0.4 374,419 + -1.6 374,421 + -4.2 374,422 - -3.2 374,507 + -1.9 374,508 - -1.3 374,650 + -3.8 374,650 + -2.5 374,651 - -3.9 374,651 - -3.8 374,667 + -3.7 374,679 - -3.5 374,721 + -4.3 374,778 + -5.6 374,779 - -2.3 374,779 - -1.9 374,857 + BACOVA_04462 0.12 -3.1 374,858 - BACOVA_04462 0.12 -3.7 374,858 - BACOVA_04462 0.12 -5.0 374,896 + BACOVA_04462 0.13 -2.4 374,897 - BACOVA_04462 0.13 -3.1 374,957 + BACOVA_04462 0.14 -2.8 375,002 + BACOVA_04462 0.16 -2.8 375,011 + BACOVA_04462 0.16 -1.1 375,011 + BACOVA_04462 0.16 -4.8 375,034 + BACOVA_04462 0.16 -3.8 375,045 + BACOVA_04462 0.17 -3.3 375,048 - BACOVA_04462 0.17 -2.9 375,053 + BACOVA_04462 0.17 -2.3 375,058 + BACOVA_04462 0.17 -4.7 375,059 - BACOVA_04462 0.17 -0.9 375,131 - BACOVA_04462 0.19 -3.2 375,149 + BACOVA_04462 0.19 -3.1 375,150 - BACOVA_04462 0.20 -3.8 375,182 + BACOVA_04462 0.20 -0.9 375,186 - BACOVA_04462 0.20 -1.6 375,242 + BACOVA_04462 0.22 -4.4 375,255 - BACOVA_04462 0.22 -1.9 375,279 - BACOVA_04462 0.23 -2.1 375,288 + BACOVA_04462 0.23 -4.0 375,289 - BACOVA_04462 0.23 -2.5 375,289 - BACOVA_04462 0.23 -1.9 375,360 + BACOVA_04462 0.25 -3.1 375,383 + BACOVA_04462 0.26 -1.3 375,384 - BACOVA_04462 0.26 -3.1 375,384 - BACOVA_04462 0.26 -2.6
Or see this region's nucleotide sequence