Experiment: D-Maltose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_04190 and BACOVA_04191 overlap by 4 nucleotides BACOVA_04191 and BACOVA_04192 are separated by 277 nucleotides
BACOVA_04190: BACOVA_04190 - kelch repeat protein, at 67,116 to 68,183
_04190
BACOVA_04191: BACOVA_04191 - transcriptional regulator, GntR family, at 68,180 to 68,950
_04191
BACOVA_04192: BACOVA_04192 - YbaK/proline--tRNA ligase associated domain protein, at 69,228 to 69,791
_04192
Position (kb) 68
69 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 67.181 kb on - strand at 67.196 kb on + strand at 67.282 kb on - strand, within BACOVA_04190 at 67.286 kb on + strand, within BACOVA_04190 at 67.293 kb on - strand, within BACOVA_04190 at 67.317 kb on - strand, within BACOVA_04190 at 67.323 kb on + strand, within BACOVA_04190 at 67.350 kb on + strand, within BACOVA_04190 at 67.350 kb on + strand, within BACOVA_04190 at 67.350 kb on + strand, within BACOVA_04190 at 67.350 kb on + strand, within BACOVA_04190 at 67.350 kb on + strand, within BACOVA_04190 at 67.351 kb on - strand, within BACOVA_04190 at 67.351 kb on - strand, within BACOVA_04190 at 67.374 kb on - strand, within BACOVA_04190 at 67.438 kb on + strand, within BACOVA_04190 at 67.439 kb on - strand, within BACOVA_04190 at 67.440 kb on + strand, within BACOVA_04190 at 67.440 kb on + strand, within BACOVA_04190 at 67.440 kb on + strand, within BACOVA_04190 at 67.441 kb on - strand, within BACOVA_04190 at 67.441 kb on - strand, within BACOVA_04190 at 67.454 kb on + strand, within BACOVA_04190 at 67.455 kb on - strand, within BACOVA_04190 at 67.461 kb on + strand, within BACOVA_04190 at 67.483 kb on + strand, within BACOVA_04190 at 67.484 kb on - strand, within BACOVA_04190 at 67.537 kb on + strand, within BACOVA_04190 at 67.596 kb on + strand, within BACOVA_04190 at 67.607 kb on + strand, within BACOVA_04190 at 67.640 kb on + strand, within BACOVA_04190 at 67.663 kb on - strand, within BACOVA_04190 at 67.667 kb on + strand, within BACOVA_04190 at 67.667 kb on + strand, within BACOVA_04190 at 67.667 kb on + strand, within BACOVA_04190 at 67.667 kb on + strand, within BACOVA_04190 at 67.667 kb on + strand, within BACOVA_04190 at 67.668 kb on - strand, within BACOVA_04190 at 67.668 kb on - strand, within BACOVA_04190 at 67.668 kb on - strand, within BACOVA_04190 at 67.727 kb on + strand, within BACOVA_04190 at 67.737 kb on + strand, within BACOVA_04190 at 67.738 kb on - strand, within BACOVA_04190 at 67.741 kb on - strand, within BACOVA_04190 at 67.793 kb on + strand, within BACOVA_04190 at 67.794 kb on - strand, within BACOVA_04190 at 67.811 kb on + strand, within BACOVA_04190 at 67.815 kb on + strand, within BACOVA_04190 at 67.815 kb on + strand, within BACOVA_04190 at 67.815 kb on + strand, within BACOVA_04190 at 67.815 kb on + strand, within BACOVA_04190 at 67.815 kb on + strand, within BACOVA_04190 at 67.815 kb on + strand, within BACOVA_04190 at 67.816 kb on - strand, within BACOVA_04190 at 67.816 kb on - strand, within BACOVA_04190 at 67.816 kb on - strand, within BACOVA_04190 at 67.818 kb on + strand, within BACOVA_04190 at 67.837 kb on - strand, within BACOVA_04190 at 67.849 kb on + strand, within BACOVA_04190 at 67.892 kb on + strand, within BACOVA_04190 at 67.893 kb on - strand, within BACOVA_04190 at 67.894 kb on - strand, within BACOVA_04190 at 67.897 kb on - strand, within BACOVA_04190 at 67.909 kb on + strand, within BACOVA_04190 at 67.909 kb on + strand, within BACOVA_04190 at 67.910 kb on - strand, within BACOVA_04190 at 67.913 kb on + strand, within BACOVA_04190 at 67.913 kb on + strand, within BACOVA_04190 at 67.914 kb on - strand, within BACOVA_04190 at 67.915 kb on + strand, within BACOVA_04190 at 67.915 kb on + strand, within BACOVA_04190 at 67.918 kb on - strand, within BACOVA_04190 at 67.958 kb on - strand, within BACOVA_04190 at 68.004 kb on + strand, within BACOVA_04190 at 68.005 kb on - strand, within BACOVA_04190 at 68.005 kb on - strand, within BACOVA_04190 at 68.007 kb on + strand, within BACOVA_04190 at 68.008 kb on - strand, within BACOVA_04190 at 68.017 kb on + strand, within BACOVA_04190 at 68.054 kb on + strand, within BACOVA_04190 at 68.055 kb on - strand, within BACOVA_04190 at 68.091 kb on + strand at 68.091 kb on + strand at 68.092 kb on - strand at 68.099 kb on + strand at 68.100 kb on - strand at 68.132 kb on + strand at 68.133 kb on - strand at 68.135 kb on - strand at 68.156 kb on - strand at 68.185 kb on + strand at 68.185 kb on + strand at 68.186 kb on - strand at 68.188 kb on + strand at 68.188 kb on + strand at 68.188 kb on + strand at 68.188 kb on + strand at 68.188 kb on + strand at 68.189 kb on - strand at 68.189 kb on - strand at 68.189 kb on - strand at 68.189 kb on - strand at 68.189 kb on - strand at 68.189 kb on - strand at 68.189 kb on - strand at 68.245 kb on + strand at 68.255 kb on - strand at 68.256 kb on + strand at 68.314 kb on + strand, within BACOVA_04191 at 68.314 kb on + strand, within BACOVA_04191 at 68.338 kb on + strand, within BACOVA_04191 at 68.339 kb on - strand, within BACOVA_04191 at 68.339 kb on - strand, within BACOVA_04191 at 68.356 kb on + strand, within BACOVA_04191 at 68.368 kb on + strand, within BACOVA_04191 at 68.369 kb on - strand, within BACOVA_04191 at 68.381 kb on + strand, within BACOVA_04191 at 68.409 kb on + strand, within BACOVA_04191 at 68.417 kb on + strand, within BACOVA_04191 at 68.420 kb on - strand, within BACOVA_04191 at 68.420 kb on - strand, within BACOVA_04191 at 68.450 kb on + strand, within BACOVA_04191 at 68.450 kb on + strand, within BACOVA_04191 at 68.456 kb on - strand, within BACOVA_04191 at 68.473 kb on - strand, within BACOVA_04191 at 68.482 kb on + strand, within BACOVA_04191 at 68.566 kb on + strand, within BACOVA_04191 at 68.567 kb on - strand, within BACOVA_04191 at 68.567 kb on - strand, within BACOVA_04191 at 68.580 kb on - strand, within BACOVA_04191 at 68.584 kb on + strand, within BACOVA_04191 at 68.675 kb on + strand, within BACOVA_04191 at 68.676 kb on - strand, within BACOVA_04191 at 68.676 kb on - strand, within BACOVA_04191 at 68.805 kb on - strand, within BACOVA_04191 at 68.871 kb on + strand, within BACOVA_04191 at 68.875 kb on + strand at 68.875 kb on + strand at 68.875 kb on + strand at 68.876 kb on - strand at 68.876 kb on - strand at 68.879 kb on + strand at 68.880 kb on - strand at 68.932 kb on + strand at 68.935 kb on + strand at 68.935 kb on + strand at 68.986 kb on + strand at 69.009 kb on - strand at 69.020 kb on - strand at 69.068 kb on - strand at 69.121 kb on - strand at 69.121 kb on - strand at 69.133 kb on + strand at 69.133 kb on + strand at 69.137 kb on + strand at 69.137 kb on + strand at 69.140 kb on + strand at 69.161 kb on + strand at 69.162 kb on - strand at 69.213 kb on - strand at 69.227 kb on + strand at 69.227 kb on + strand at 69.234 kb on - strand at 69.238 kb on + strand at 69.239 kb on - strand at 69.245 kb on + strand at 69.246 kb on - strand at 69.246 kb on - strand at 69.274 kb on - strand at 69.295 kb on - strand, within BACOVA_04192 at 69.322 kb on - strand, within BACOVA_04192 at 69.322 kb on - strand, within BACOVA_04192 at 69.403 kb on + strand, within BACOVA_04192 at 69.422 kb on + strand, within BACOVA_04192 at 69.423 kb on - strand, within BACOVA_04192 at 69.423 kb on - strand, within BACOVA_04192 at 69.452 kb on + strand, within BACOVA_04192 at 69.453 kb on - strand, within BACOVA_04192 at 69.478 kb on + strand, within BACOVA_04192 at 69.526 kb on + strand, within BACOVA_04192 at 69.527 kb on - strand, within BACOVA_04192 at 69.527 kb on - strand, within BACOVA_04192 at 69.527 kb on - strand, within BACOVA_04192 at 69.530 kb on + strand, within BACOVA_04192 at 69.531 kb on - strand, within BACOVA_04192 at 69.582 kb on - strand, within BACOVA_04192 at 69.607 kb on + strand, within BACOVA_04192 at 69.608 kb on - strand, within BACOVA_04192 at 69.614 kb on + strand, within BACOVA_04192 at 69.614 kb on + strand, within BACOVA_04192 at 69.615 kb on - strand, within BACOVA_04192 at 69.623 kb on + strand, within BACOVA_04192 at 69.637 kb on + strand, within BACOVA_04192 at 69.638 kb on - strand, within BACOVA_04192 at 69.654 kb on - strand, within BACOVA_04192 at 69.675 kb on + strand, within BACOVA_04192 at 69.675 kb on + strand, within BACOVA_04192 at 69.675 kb on + strand, within BACOVA_04192 at 69.676 kb on - strand, within BACOVA_04192 at 69.676 kb on - strand, within BACOVA_04192 at 69.676 kb on - strand, within BACOVA_04192 at 69.677 kb on + strand, within BACOVA_04192 at 69.678 kb on - strand, within BACOVA_04192 at 69.679 kb on + strand, within BACOVA_04192 at 69.679 kb on + strand, within BACOVA_04192 at 69.679 kb on + strand, within BACOVA_04192 at 69.679 kb on + strand, within BACOVA_04192 at 69.680 kb on - strand, within BACOVA_04192 at 69.697 kb on + strand, within BACOVA_04192 at 69.698 kb on - strand, within BACOVA_04192 at 69.698 kb on - strand, within BACOVA_04192 at 69.743 kb on - strand at 69.743 kb on - strand at 69.746 kb on - strand at 69.746 kb on - strand at 69.746 kb on - strand at 69.789 kb on + strand at 69.836 kb on + strand at 69.837 kb on - strand at 69.858 kb on + strand at 69.859 kb on - strand at 69.863 kb on + strand at 69.863 kb on + strand at 69.863 kb on + strand at 69.864 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose 10 mM (C) remove 67,181 - -1.7 67,196 + -1.5 67,282 - BACOVA_04190 0.16 -0.0 67,286 + BACOVA_04190 0.16 -0.5 67,293 - BACOVA_04190 0.17 +0.9 67,317 - BACOVA_04190 0.19 -1.0 67,323 + BACOVA_04190 0.19 +1.0 67,350 + BACOVA_04190 0.22 +0.2 67,350 + BACOVA_04190 0.22 +0.1 67,350 + BACOVA_04190 0.22 -0.1 67,350 + BACOVA_04190 0.22 -0.6 67,350 + BACOVA_04190 0.22 -0.2 67,351 - BACOVA_04190 0.22 -1.6 67,351 - BACOVA_04190 0.22 -1.0 67,374 - BACOVA_04190 0.24 +1.3 67,438 + BACOVA_04190 0.30 +0.0 67,439 - BACOVA_04190 0.30 +0.4 67,440 + BACOVA_04190 0.30 +0.1 67,440 + BACOVA_04190 0.30 +0.6 67,440 + BACOVA_04190 0.30 -1.1 67,441 - BACOVA_04190 0.30 +0.4 67,441 - BACOVA_04190 0.30 +0.7 67,454 + BACOVA_04190 0.32 -1.0 67,455 - BACOVA_04190 0.32 -1.6 67,461 + BACOVA_04190 0.32 +0.5 67,483 + BACOVA_04190 0.34 -1.3 67,484 - BACOVA_04190 0.34 +0.2 67,537 + BACOVA_04190 0.39 +0.0 67,596 + BACOVA_04190 0.45 -0.7 67,607 + BACOVA_04190 0.46 +0.8 67,640 + BACOVA_04190 0.49 -0.7 67,663 - BACOVA_04190 0.51 -0.3 67,667 + BACOVA_04190 0.52 -0.2 67,667 + BACOVA_04190 0.52 +0.7 67,667 + BACOVA_04190 0.52 +0.2 67,667 + BACOVA_04190 0.52 +1.7 67,667 + BACOVA_04190 0.52 -0.1 67,668 - BACOVA_04190 0.52 -0.3 67,668 - BACOVA_04190 0.52 -0.3 67,668 - BACOVA_04190 0.52 +0.1 67,727 + BACOVA_04190 0.57 +2.4 67,737 + BACOVA_04190 0.58 -0.2 67,738 - BACOVA_04190 0.58 -1.3 67,741 - BACOVA_04190 0.59 -0.3 67,793 + BACOVA_04190 0.63 -0.8 67,794 - BACOVA_04190 0.63 +0.0 67,811 + BACOVA_04190 0.65 +0.9 67,815 + BACOVA_04190 0.65 +0.2 67,815 + BACOVA_04190 0.65 -0.1 67,815 + BACOVA_04190 0.65 +0.7 67,815 + BACOVA_04190 0.65 +0.4 67,815 + BACOVA_04190 0.65 +0.1 67,815 + BACOVA_04190 0.65 -0.7 67,816 - BACOVA_04190 0.66 -0.9 67,816 - BACOVA_04190 0.66 -0.0 67,816 - BACOVA_04190 0.66 +1.0 67,818 + BACOVA_04190 0.66 +0.0 67,837 - BACOVA_04190 0.68 -0.8 67,849 + BACOVA_04190 0.69 -0.2 67,892 + BACOVA_04190 0.73 +0.2 67,893 - BACOVA_04190 0.73 -1.3 67,894 - BACOVA_04190 0.73 -2.0 67,897 - BACOVA_04190 0.73 +0.5 67,909 + BACOVA_04190 0.74 +1.4 67,909 + BACOVA_04190 0.74 +0.1 67,910 - BACOVA_04190 0.74 -0.5 67,913 + BACOVA_04190 0.75 -0.3 67,913 + BACOVA_04190 0.75 +1.2 67,914 - BACOVA_04190 0.75 +1.3 67,915 + BACOVA_04190 0.75 -1.0 67,915 + BACOVA_04190 0.75 -0.3 67,918 - BACOVA_04190 0.75 +0.0 67,958 - BACOVA_04190 0.79 -0.6 68,004 + BACOVA_04190 0.83 -0.5 68,005 - BACOVA_04190 0.83 -0.1 68,005 - BACOVA_04190 0.83 +0.9 68,007 + BACOVA_04190 0.83 -0.3 68,008 - BACOVA_04190 0.84 -1.1 68,017 + BACOVA_04190 0.84 +0.3 68,054 + BACOVA_04190 0.88 +0.7 68,055 - BACOVA_04190 0.88 -0.3 68,091 + +2.0 68,091 + +0.7 68,092 - +0.3 68,099 + +0.1 68,100 - -0.9 68,132 + +0.5 68,133 - -0.3 68,135 - -0.6 68,156 - -0.5 68,185 + +0.1 68,185 + -0.6 68,186 - +0.3 68,188 + +0.7 68,188 + -0.6 68,188 + -0.6 68,188 + +1.0 68,188 + -0.6 68,189 - +0.2 68,189 - -1.8 68,189 - -0.9 68,189 - +0.4 68,189 - +0.4 68,189 - -0.6 68,189 - +0.7 68,245 + +0.5 68,255 - +0.7 68,256 + -0.9 68,314 + BACOVA_04191 0.17 -0.9 68,314 + BACOVA_04191 0.17 -0.2 68,338 + BACOVA_04191 0.20 -0.0 68,339 - BACOVA_04191 0.21 -0.2 68,339 - BACOVA_04191 0.21 +0.4 68,356 + BACOVA_04191 0.23 +0.1 68,368 + BACOVA_04191 0.24 +0.8 68,369 - BACOVA_04191 0.25 -0.4 68,381 + BACOVA_04191 0.26 +0.1 68,409 + BACOVA_04191 0.30 +1.1 68,417 + BACOVA_04191 0.31 +0.3 68,420 - BACOVA_04191 0.31 -0.9 68,420 - BACOVA_04191 0.31 -1.3 68,450 + BACOVA_04191 0.35 +0.8 68,450 + BACOVA_04191 0.35 +0.6 68,456 - BACOVA_04191 0.36 +0.4 68,473 - BACOVA_04191 0.38 -0.9 68,482 + BACOVA_04191 0.39 -0.6 68,566 + BACOVA_04191 0.50 -1.3 68,567 - BACOVA_04191 0.50 -1.1 68,567 - BACOVA_04191 0.50 -0.3 68,580 - BACOVA_04191 0.52 -0.5 68,584 + BACOVA_04191 0.52 -1.6 68,675 + BACOVA_04191 0.64 -0.2 68,676 - BACOVA_04191 0.64 +1.2 68,676 - BACOVA_04191 0.64 -0.4 68,805 - BACOVA_04191 0.81 -0.6 68,871 + BACOVA_04191 0.90 -0.2 68,875 + -0.2 68,875 + -0.1 68,875 + +0.4 68,876 - -0.2 68,876 - -1.7 68,879 + -0.3 68,880 - +0.9 68,932 + +0.3 68,935 + -0.0 68,935 + +0.2 68,986 + +0.1 69,009 - -1.3 69,020 - -1.3 69,068 - -0.9 69,121 - +0.3 69,121 - -0.3 69,133 + -0.6 69,133 + +0.6 69,137 + -1.2 69,137 + -0.4 69,140 + -0.4 69,161 + +0.4 69,162 - -1.5 69,213 - +0.1 69,227 + +0.1 69,227 + +1.3 69,234 - -0.9 69,238 + -0.1 69,239 - -0.6 69,245 + +1.0 69,246 - -0.6 69,246 - -0.8 69,274 - -0.9 69,295 - BACOVA_04192 0.12 +0.1 69,322 - BACOVA_04192 0.17 -1.1 69,322 - BACOVA_04192 0.17 +0.9 69,403 + BACOVA_04192 0.31 -0.1 69,422 + BACOVA_04192 0.34 +1.3 69,423 - BACOVA_04192 0.35 +0.3 69,423 - BACOVA_04192 0.35 +0.7 69,452 + BACOVA_04192 0.40 -0.3 69,453 - BACOVA_04192 0.40 -0.2 69,478 + BACOVA_04192 0.44 -0.4 69,526 + BACOVA_04192 0.53 +0.7 69,527 - BACOVA_04192 0.53 -0.0 69,527 - BACOVA_04192 0.53 -0.5 69,527 - BACOVA_04192 0.53 +0.0 69,530 + BACOVA_04192 0.54 +0.0 69,531 - BACOVA_04192 0.54 +0.7 69,582 - BACOVA_04192 0.63 -1.2 69,607 + BACOVA_04192 0.67 +1.7 69,608 - BACOVA_04192 0.67 +0.9 69,614 + BACOVA_04192 0.68 +1.5 69,614 + BACOVA_04192 0.68 -0.5 69,615 - BACOVA_04192 0.69 -0.4 69,623 + BACOVA_04192 0.70 -1.4 69,637 + BACOVA_04192 0.73 -0.2 69,638 - BACOVA_04192 0.73 +0.7 69,654 - BACOVA_04192 0.76 -0.2 69,675 + BACOVA_04192 0.79 -0.3 69,675 + BACOVA_04192 0.79 -3.1 69,675 + BACOVA_04192 0.79 +0.2 69,676 - BACOVA_04192 0.79 +0.2 69,676 - BACOVA_04192 0.79 -0.3 69,676 - BACOVA_04192 0.79 -0.2 69,677 + BACOVA_04192 0.80 -1.5 69,678 - BACOVA_04192 0.80 -0.9 69,679 + BACOVA_04192 0.80 +0.2 69,679 + BACOVA_04192 0.80 -0.7 69,679 + BACOVA_04192 0.80 +1.3 69,679 + BACOVA_04192 0.80 -1.6 69,680 - BACOVA_04192 0.80 +0.5 69,697 + BACOVA_04192 0.83 +0.9 69,698 - BACOVA_04192 0.83 -0.3 69,698 - BACOVA_04192 0.83 +0.1 69,743 - +0.3 69,743 - -0.0 69,746 - -0.0 69,746 - -0.3 69,746 - -0.3 69,789 + -0.3 69,836 + +0.1 69,837 - -0.0 69,858 + +0.7 69,859 - -0.1 69,863 + +0.6 69,863 + -0.0 69,863 + -0.9 69,864 - -1.3
Or see this region's nucleotide sequence