Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_05313

Experiment: NAG 10 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_05312 and BACOVA_05313 are separated by 71 nucleotidesBACOVA_05313 and BACOVA_05314 are separated by 121 nucleotidesBACOVA_05314 and BACOVA_05315 are separated by 9 nucleotidesBACOVA_05315 and BACOVA_05316 are separated by 19 nucleotides BACOVA_05312: BACOVA_05312 - acetyltransferase, GNAT family, at 800,617 to 802,029 _05312 BACOVA_05313: BACOVA_05313 - putative beta-lactamase, at 802,101 to 802,982 _05313 BACOVA_05314: BACOVA_05314 - hypothetical protein, at 803,104 to 803,211 _05314 BACOVA_05315: BACOVA_05315 - hypothetical protein, at 803,221 to 803,523 _05315 BACOVA_05316: BACOVA_05316 - hypothetical protein, at 803,543 to 804,337 _05316 Position (kb) 802 803Strain fitness (log2 ratio) -2 -1 0 1 2 3at 801.139 kb on - strand, within BACOVA_05312at 801.147 kb on - strand, within BACOVA_05312at 801.204 kb on + strand, within BACOVA_05312at 801.275 kb on + strand, within BACOVA_05312at 801.275 kb on + strand, within BACOVA_05312at 801.276 kb on - strand, within BACOVA_05312at 801.385 kb on - strand, within BACOVA_05312at 801.385 kb on - strand, within BACOVA_05312at 801.392 kb on - strand, within BACOVA_05312at 801.392 kb on - strand, within BACOVA_05312at 801.406 kb on + strand, within BACOVA_05312at 801.407 kb on - strand, within BACOVA_05312at 801.423 kb on + strand, within BACOVA_05312at 801.423 kb on + strand, within BACOVA_05312at 801.424 kb on - strand, within BACOVA_05312at 801.424 kb on - strand, within BACOVA_05312at 801.462 kb on + strand, within BACOVA_05312at 801.591 kb on + strand, within BACOVA_05312at 801.591 kb on + strand, within BACOVA_05312at 801.592 kb on - strand, within BACOVA_05312at 801.594 kb on + strand, within BACOVA_05312at 801.598 kb on + strand, within BACOVA_05312at 801.689 kb on - strand, within BACOVA_05312at 801.702 kb on - strand, within BACOVA_05312at 801.717 kb on + strand, within BACOVA_05312at 801.738 kb on + strand, within BACOVA_05312at 801.738 kb on + strand, within BACOVA_05312at 801.739 kb on - strand, within BACOVA_05312at 801.850 kb on + strand, within BACOVA_05312at 801.851 kb on - strand, within BACOVA_05312at 801.856 kb on + strand, within BACOVA_05312at 801.856 kb on + strand, within BACOVA_05312at 801.856 kb on + strand, within BACOVA_05312at 801.857 kb on - strand, within BACOVA_05312at 801.858 kb on + strand, within BACOVA_05312at 801.858 kb on + strand, within BACOVA_05312at 801.901 kb on - strandat 801.905 kb on + strandat 801.906 kb on - strandat 801.971 kb on + strandat 801.971 kb on + strandat 801.971 kb on + strandat 801.971 kb on + strandat 801.972 kb on - strandat 802.044 kb on + strandat 802.052 kb on - strandat 802.097 kb on + strandat 802.102 kb on + strandat 802.113 kb on + strandat 802.114 kb on - strandat 802.114 kb on - strandat 802.114 kb on - strandat 802.148 kb on + strandat 802.154 kb on + strandat 802.155 kb on - strandat 802.169 kb on + strandat 802.170 kb on - strandat 802.200 kb on + strand, within BACOVA_05313at 802.200 kb on + strand, within BACOVA_05313at 802.202 kb on + strand, within BACOVA_05313at 802.203 kb on - strand, within BACOVA_05313at 802.205 kb on + strand, within BACOVA_05313at 802.205 kb on + strand, within BACOVA_05313at 802.205 kb on + strand, within BACOVA_05313at 802.206 kb on - strand, within BACOVA_05313at 802.206 kb on - strand, within BACOVA_05313at 802.207 kb on + strand, within BACOVA_05313at 802.208 kb on - strand, within BACOVA_05313at 802.212 kb on - strand, within BACOVA_05313at 802.248 kb on - strand, within BACOVA_05313at 802.248 kb on - strand, within BACOVA_05313at 802.275 kb on - strand, within BACOVA_05313at 802.302 kb on + strand, within BACOVA_05313at 802.377 kb on + strand, within BACOVA_05313at 802.390 kb on + strand, within BACOVA_05313at 802.473 kb on + strand, within BACOVA_05313at 802.534 kb on - strand, within BACOVA_05313at 802.544 kb on + strand, within BACOVA_05313at 802.546 kb on + strand, within BACOVA_05313at 802.547 kb on - strand, within BACOVA_05313at 802.555 kb on - strand, within BACOVA_05313at 802.673 kb on + strand, within BACOVA_05313at 802.674 kb on - strand, within BACOVA_05313at 802.691 kb on - strand, within BACOVA_05313at 802.691 kb on - strand, within BACOVA_05313at 802.694 kb on + strand, within BACOVA_05313at 802.760 kb on + strand, within BACOVA_05313at 802.762 kb on + strand, within BACOVA_05313at 802.798 kb on - strand, within BACOVA_05313at 802.821 kb on - strand, within BACOVA_05313at 802.826 kb on + strand, within BACOVA_05313at 802.837 kb on - strand, within BACOVA_05313at 802.841 kb on + strand, within BACOVA_05313at 802.866 kb on + strand, within BACOVA_05313at 802.867 kb on - strand, within BACOVA_05313at 802.872 kb on + strand, within BACOVA_05313at 802.872 kb on + strand, within BACOVA_05313at 802.873 kb on - strand, within BACOVA_05313at 802.954 kb on - strandat 802.966 kb on - strandat 802.968 kb on + strandat 803.028 kb on + strandat 803.054 kb on + strandat 803.055 kb on - strandat 803.055 kb on - strandat 803.055 kb on - strandat 803.059 kb on - strandat 803.059 kb on - strandat 803.059 kb on - strandat 803.092 kb on + strandat 803.093 kb on - strandat 803.100 kb on + strandat 803.100 kb on + strandat 803.100 kb on + strandat 803.100 kb on + strandat 803.112 kb on + strandat 803.113 kb on - strandat 803.141 kb on + strand, within BACOVA_05314at 803.166 kb on + strand, within BACOVA_05314at 803.171 kb on - strand, within BACOVA_05314at 803.182 kb on + strand, within BACOVA_05314at 803.199 kb on + strand, within BACOVA_05314at 803.200 kb on - strand, within BACOVA_05314at 803.200 kb on - strand, within BACOVA_05314at 803.200 kb on - strand, within BACOVA_05314at 803.201 kb on + strandat 803.220 kb on + strandat 803.220 kb on + strandat 803.227 kb on - strandat 803.227 kb on - strandat 803.257 kb on + strand, within BACOVA_05315at 803.257 kb on + strand, within BACOVA_05315at 803.258 kb on - strand, within BACOVA_05315at 803.259 kb on + strand, within BACOVA_05315at 803.285 kb on - strand, within BACOVA_05315at 803.288 kb on - strand, within BACOVA_05315at 803.328 kb on + strand, within BACOVA_05315at 803.328 kb on + strand, within BACOVA_05315at 803.406 kb on + strand, within BACOVA_05315at 803.419 kb on - strand, within BACOVA_05315at 803.426 kb on + strand, within BACOVA_05315at 803.427 kb on - strand, within BACOVA_05315at 803.427 kb on - strand, within BACOVA_05315at 803.439 kb on + strand, within BACOVA_05315at 803.464 kb on - strand, within BACOVA_05315at 803.564 kb on + strandat 803.565 kb on - strandat 803.565 kb on - strandat 803.579 kb on + strandat 803.587 kb on - strandat 803.596 kb on + strandat 803.596 kb on + strandat 803.596 kb on + strandat 803.596 kb on + strandat 803.596 kb on + strandat 803.596 kb on + strandat 803.599 kb on + strandat 803.617 kb on + strandat 803.618 kb on - strandat 803.636 kb on + strand, within BACOVA_05316at 803.636 kb on + strand, within BACOVA_05316at 803.636 kb on + strand, within BACOVA_05316at 803.637 kb on - strand, within BACOVA_05316at 803.642 kb on - strand, within BACOVA_05316at 803.705 kb on - strand, within BACOVA_05316at 803.708 kb on + strand, within BACOVA_05316at 803.709 kb on - strand, within BACOVA_05316at 803.752 kb on + strand, within BACOVA_05316at 803.758 kb on - strand, within BACOVA_05316at 803.764 kb on + strand, within BACOVA_05316at 803.765 kb on - strand, within BACOVA_05316at 803.765 kb on - strand, within BACOVA_05316at 803.765 kb on - strand, within BACOVA_05316at 803.771 kb on - strand, within BACOVA_05316at 803.775 kb on + strand, within BACOVA_05316at 803.776 kb on - strand, within BACOVA_05316at 803.776 kb on - strand, within BACOVA_05316at 803.817 kb on + strand, within BACOVA_05316at 803.817 kb on + strand, within BACOVA_05316at 803.820 kb on + strand, within BACOVA_05316at 803.820 kb on + strand, within BACOVA_05316at 803.851 kb on + strand, within BACOVA_05316at 803.851 kb on + strand, within BACOVA_05316at 803.852 kb on - strand, within BACOVA_05316at 803.875 kb on + strand, within BACOVA_05316at 803.876 kb on - strand, within BACOVA_05316at 803.928 kb on + strand, within BACOVA_05316at 803.930 kb on + strand, within BACOVA_05316at 803.931 kb on - strand, within BACOVA_05316at 803.931 kb on - strand, within BACOVA_05316at 803.931 kb on - strand, within BACOVA_05316at 803.970 kb on - strand, within BACOVA_05316

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Per-strain Table

Position Strand Gene LocusTag Fraction NAG 10 mM (C)
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801,139 - BACOVA_05312 0.37 -1.0
801,147 - BACOVA_05312 0.38 +0.9
801,204 + BACOVA_05312 0.42 +0.7
801,275 + BACOVA_05312 0.47 -0.8
801,275 + BACOVA_05312 0.47 -0.3
801,276 - BACOVA_05312 0.47 +0.3
801,385 - BACOVA_05312 0.54 +0.3
801,385 - BACOVA_05312 0.54 +2.0
801,392 - BACOVA_05312 0.55 +0.7
801,392 - BACOVA_05312 0.55 -1.7
801,406 + BACOVA_05312 0.56 -0.7
801,407 - BACOVA_05312 0.56 +0.1
801,423 + BACOVA_05312 0.57 +1.0
801,423 + BACOVA_05312 0.57 +0.1
801,424 - BACOVA_05312 0.57 +0.1
801,424 - BACOVA_05312 0.57 +0.8
801,462 + BACOVA_05312 0.60 -1.9
801,591 + BACOVA_05312 0.69 -0.8
801,591 + BACOVA_05312 0.69 +0.4
801,592 - BACOVA_05312 0.69 -0.5
801,594 + BACOVA_05312 0.69 -0.1
801,598 + BACOVA_05312 0.69 +0.3
801,689 - BACOVA_05312 0.76 -1.3
801,702 - BACOVA_05312 0.77 -2.0
801,717 + BACOVA_05312 0.78 +0.2
801,738 + BACOVA_05312 0.79 +1.9
801,738 + BACOVA_05312 0.79 +0.4
801,739 - BACOVA_05312 0.79 -1.1
801,850 + BACOVA_05312 0.87 +0.1
801,851 - BACOVA_05312 0.87 -0.4
801,856 + BACOVA_05312 0.88 +0.9
801,856 + BACOVA_05312 0.88 -0.7
801,856 + BACOVA_05312 0.88 -0.3
801,857 - BACOVA_05312 0.88 -1.0
801,858 + BACOVA_05312 0.88 +0.4
801,858 + BACOVA_05312 0.88 -1.1
801,901 - +1.1
801,905 + +0.5
801,906 - +0.2
801,971 + -0.7
801,971 + -0.7
801,971 + +3.7
801,971 + -1.0
801,972 - +0.7
802,044 + +0.2
802,052 - -0.7
802,097 + -1.5
802,102 + +0.8
802,113 + -1.0
802,114 - -0.9
802,114 - +0.7
802,114 - -0.2
802,148 + -0.9
802,154 + -0.8
802,155 - +0.5
802,169 + +0.7
802,170 - +0.7
802,200 + BACOVA_05313 0.11 -0.2
802,200 + BACOVA_05313 0.11 +0.5
802,202 + BACOVA_05313 0.11 -1.0
802,203 - BACOVA_05313 0.12 +0.3
802,205 + BACOVA_05313 0.12 +0.5
802,205 + BACOVA_05313 0.12 -0.3
802,205 + BACOVA_05313 0.12 -0.0
802,206 - BACOVA_05313 0.12 -0.3
802,206 - BACOVA_05313 0.12 +1.7
802,207 + BACOVA_05313 0.12 +0.3
802,208 - BACOVA_05313 0.12 -0.7
802,212 - BACOVA_05313 0.13 +0.7
802,248 - BACOVA_05313 0.17 -1.3
802,248 - BACOVA_05313 0.17 +1.5
802,275 - BACOVA_05313 0.20 +1.2
802,302 + BACOVA_05313 0.23 +0.9
802,377 + BACOVA_05313 0.31 +0.7
802,390 + BACOVA_05313 0.33 +0.7
802,473 + BACOVA_05313 0.42 -0.3
802,534 - BACOVA_05313 0.49 +0.7
802,544 + BACOVA_05313 0.50 +0.5
802,546 + BACOVA_05313 0.50 -0.9
802,547 - BACOVA_05313 0.51 +3.1
802,555 - BACOVA_05313 0.51 -0.7
802,673 + BACOVA_05313 0.65 -0.9
802,674 - BACOVA_05313 0.65 +0.5
802,691 - BACOVA_05313 0.67 -1.2
802,691 - BACOVA_05313 0.67 -1.2
802,694 + BACOVA_05313 0.67 -1.3
802,760 + BACOVA_05313 0.75 +0.1
802,762 + BACOVA_05313 0.75 +0.7
802,798 - BACOVA_05313 0.79 -1.4
802,821 - BACOVA_05313 0.82 +1.7
802,826 + BACOVA_05313 0.82 -0.3
802,837 - BACOVA_05313 0.83 -0.8
802,841 + BACOVA_05313 0.84 +1.1
802,866 + BACOVA_05313 0.87 +0.7
802,867 - BACOVA_05313 0.87 -0.5
802,872 + BACOVA_05313 0.87 -0.4
802,872 + BACOVA_05313 0.87 -1.0
802,873 - BACOVA_05313 0.88 -0.0
802,954 - +0.2
802,966 - +0.2
802,968 + -1.0
803,028 + +0.7
803,054 + -0.8
803,055 - +0.1
803,055 - -0.2
803,055 - -1.4
803,059 - +1.7
803,059 - +1.1
803,059 - -1.3
803,092 + +0.7
803,093 - +0.2
803,100 + +2.3
803,100 + -0.5
803,100 + +0.7
803,100 + -0.9
803,112 + +0.1
803,113 - +0.1
803,141 + BACOVA_05314 0.34 -0.6
803,166 + BACOVA_05314 0.57 -1.0
803,171 - BACOVA_05314 0.62 +0.0
803,182 + BACOVA_05314 0.72 -0.3
803,199 + BACOVA_05314 0.88 -1.3
803,200 - BACOVA_05314 0.89 +0.1
803,200 - BACOVA_05314 0.89 -1.5
803,200 - BACOVA_05314 0.89 +0.1
803,201 + +0.5
803,220 + -1.1
803,220 + -1.9
803,227 - +1.7
803,227 - +0.1
803,257 + BACOVA_05315 0.12 +0.1
803,257 + BACOVA_05315 0.12 +0.6
803,258 - BACOVA_05315 0.12 +0.7
803,259 + BACOVA_05315 0.13 +0.8
803,285 - BACOVA_05315 0.21 -0.3
803,288 - BACOVA_05315 0.22 -0.7
803,328 + BACOVA_05315 0.35 -1.8
803,328 + BACOVA_05315 0.35 +0.7
803,406 + BACOVA_05315 0.61 -1.9
803,419 - BACOVA_05315 0.65 +0.4
803,426 + BACOVA_05315 0.68 +0.8
803,427 - BACOVA_05315 0.68 -0.5
803,427 - BACOVA_05315 0.68 +0.7
803,439 + BACOVA_05315 0.72 -1.8
803,464 - BACOVA_05315 0.80 +0.7
803,564 + +0.3
803,565 - +0.3
803,565 - +1.2
803,579 + -0.3
803,587 - -1.2
803,596 + -0.5
803,596 + +0.2
803,596 + +1.2
803,596 + +0.6
803,596 + -2.0
803,596 + -1.9
803,599 + -0.8
803,617 + +1.7
803,618 - -0.3
803,636 + BACOVA_05316 0.12 +1.3
803,636 + BACOVA_05316 0.12 +0.1
803,636 + BACOVA_05316 0.12 -0.1
803,637 - BACOVA_05316 0.12 -0.7
803,642 - BACOVA_05316 0.12 -0.3
803,705 - BACOVA_05316 0.20 +0.5
803,708 + BACOVA_05316 0.21 +2.0
803,709 - BACOVA_05316 0.21 -0.5
803,752 + BACOVA_05316 0.26 +0.2
803,758 - BACOVA_05316 0.27 +1.1
803,764 + BACOVA_05316 0.28 +0.3
803,765 - BACOVA_05316 0.28 -0.2
803,765 - BACOVA_05316 0.28 +0.1
803,765 - BACOVA_05316 0.28 -0.5
803,771 - BACOVA_05316 0.29 -0.2
803,775 + BACOVA_05316 0.29 -1.0
803,776 - BACOVA_05316 0.29 -0.3
803,776 - BACOVA_05316 0.29 -0.1
803,817 + BACOVA_05316 0.34 -0.3
803,817 + BACOVA_05316 0.34 +0.4
803,820 + BACOVA_05316 0.35 -0.8
803,820 + BACOVA_05316 0.35 -1.4
803,851 + BACOVA_05316 0.39 -0.9
803,851 + BACOVA_05316 0.39 +1.7
803,852 - BACOVA_05316 0.39 -0.5
803,875 + BACOVA_05316 0.42 -0.4
803,876 - BACOVA_05316 0.42 -0.3
803,928 + BACOVA_05316 0.48 +0.1
803,930 + BACOVA_05316 0.49 -0.2
803,931 - BACOVA_05316 0.49 +0.8
803,931 - BACOVA_05316 0.49 +0.1
803,931 - BACOVA_05316 0.49 -1.3
803,970 - BACOVA_05316 0.54 -0.4

Or see this region's nucleotide sequence