Experiment: NAG 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_02978 and BACOVA_02979 are separated by 18 nucleotides BACOVA_02979 and BACOVA_02980 are separated by 57 nucleotides BACOVA_02980 and BACOVA_02981 are separated by 0 nucleotides
BACOVA_02978: BACOVA_02978 - K+-transporting ATPase, A subunit, at 55,625 to 57,331
_02978
BACOVA_02979: BACOVA_02979 - K+-transporting ATPase, B subunit, at 57,350 to 59,383
_02979
BACOVA_02980: BACOVA_02980 - putative K+-transporting ATPase, C subunit, at 59,441 to 59,971
_02980
BACOVA_02981: BACOVA_02981 - hypothetical protein, at 59,972 to 60,856
_02981
Position (kb) 57
58
59
60 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 56.372 kb on - strand, within BACOVA_02978 at 56.376 kb on - strand, within BACOVA_02978 at 56.376 kb on - strand, within BACOVA_02978 at 56.376 kb on - strand, within BACOVA_02978 at 56.430 kb on + strand, within BACOVA_02978 at 56.431 kb on - strand, within BACOVA_02978 at 56.448 kb on - strand, within BACOVA_02978 at 56.476 kb on + strand, within BACOVA_02978 at 56.488 kb on - strand, within BACOVA_02978 at 56.488 kb on - strand, within BACOVA_02978 at 56.518 kb on + strand, within BACOVA_02978 at 56.522 kb on - strand, within BACOVA_02978 at 56.522 kb on - strand, within BACOVA_02978 at 56.680 kb on + strand, within BACOVA_02978 at 56.693 kb on - strand, within BACOVA_02978 at 56.695 kb on + strand, within BACOVA_02978 at 56.729 kb on - strand, within BACOVA_02978 at 56.738 kb on - strand, within BACOVA_02978 at 56.738 kb on - strand, within BACOVA_02978 at 56.777 kb on + strand, within BACOVA_02978 at 56.777 kb on + strand, within BACOVA_02978 at 56.778 kb on - strand, within BACOVA_02978 at 56.778 kb on - strand, within BACOVA_02978 at 56.782 kb on + strand, within BACOVA_02978 at 56.783 kb on - strand, within BACOVA_02978 at 56.783 kb on - strand, within BACOVA_02978 at 56.783 kb on - strand, within BACOVA_02978 at 56.783 kb on - strand, within BACOVA_02978 at 56.783 kb on - strand, within BACOVA_02978 at 56.889 kb on + strand, within BACOVA_02978 at 56.910 kb on + strand, within BACOVA_02978 at 56.939 kb on + strand, within BACOVA_02978 at 56.946 kb on - strand, within BACOVA_02978 at 56.946 kb on - strand, within BACOVA_02978 at 56.993 kb on - strand, within BACOVA_02978 at 56.993 kb on - strand, within BACOVA_02978 at 57.027 kb on - strand, within BACOVA_02978 at 57.032 kb on + strand, within BACOVA_02978 at 57.033 kb on - strand, within BACOVA_02978 at 57.082 kb on + strand, within BACOVA_02978 at 57.083 kb on - strand, within BACOVA_02978 at 57.085 kb on + strand, within BACOVA_02978 at 57.171 kb on + strand at 57.172 kb on - strand at 57.191 kb on - strand at 57.304 kb on + strand at 57.349 kb on + strand at 57.359 kb on - strand at 57.362 kb on - strand at 57.394 kb on - strand at 57.464 kb on - strand at 57.487 kb on + strand at 57.506 kb on + strand at 57.506 kb on + strand at 57.506 kb on + strand at 57.507 kb on - strand at 57.511 kb on + strand at 57.517 kb on - strand at 57.517 kb on - strand at 57.547 kb on + strand at 57.548 kb on - strand at 57.548 kb on - strand at 57.549 kb on - strand at 57.559 kb on + strand, within BACOVA_02979 at 57.560 kb on - strand, within BACOVA_02979 at 57.571 kb on + strand, within BACOVA_02979 at 57.572 kb on - strand, within BACOVA_02979 at 57.573 kb on + strand, within BACOVA_02979 at 57.574 kb on - strand, within BACOVA_02979 at 57.604 kb on + strand, within BACOVA_02979 at 57.605 kb on - strand, within BACOVA_02979 at 57.642 kb on + strand, within BACOVA_02979 at 57.642 kb on + strand, within BACOVA_02979 at 57.642 kb on + strand, within BACOVA_02979 at 57.642 kb on + strand, within BACOVA_02979 at 57.646 kb on + strand, within BACOVA_02979 at 57.647 kb on - strand, within BACOVA_02979 at 57.688 kb on + strand, within BACOVA_02979 at 57.700 kb on + strand, within BACOVA_02979 at 57.732 kb on + strand, within BACOVA_02979 at 57.733 kb on - strand, within BACOVA_02979 at 57.733 kb on - strand, within BACOVA_02979 at 57.733 kb on - strand, within BACOVA_02979 at 57.814 kb on + strand, within BACOVA_02979 at 57.899 kb on - strand, within BACOVA_02979 at 57.900 kb on + strand, within BACOVA_02979 at 57.900 kb on + strand, within BACOVA_02979 at 57.900 kb on + strand, within BACOVA_02979 at 57.900 kb on + strand, within BACOVA_02979 at 57.901 kb on - strand, within BACOVA_02979 at 58.025 kb on - strand, within BACOVA_02979 at 58.075 kb on + strand, within BACOVA_02979 at 58.075 kb on + strand, within BACOVA_02979 at 58.076 kb on - strand, within BACOVA_02979 at 58.076 kb on - strand, within BACOVA_02979 at 58.076 kb on - strand, within BACOVA_02979 at 58.138 kb on + strand, within BACOVA_02979 at 58.138 kb on + strand, within BACOVA_02979 at 58.139 kb on - strand, within BACOVA_02979 at 58.165 kb on + strand, within BACOVA_02979 at 58.175 kb on - strand, within BACOVA_02979 at 58.196 kb on - strand, within BACOVA_02979 at 58.225 kb on - strand, within BACOVA_02979 at 58.247 kb on - strand, within BACOVA_02979 at 58.251 kb on + strand, within BACOVA_02979 at 58.273 kb on + strand, within BACOVA_02979 at 58.274 kb on - strand, within BACOVA_02979 at 58.274 kb on - strand, within BACOVA_02979 at 58.276 kb on + strand, within BACOVA_02979 at 58.329 kb on + strand, within BACOVA_02979 at 58.427 kb on - strand, within BACOVA_02979 at 58.433 kb on - strand, within BACOVA_02979 at 58.456 kb on + strand, within BACOVA_02979 at 58.495 kb on + strand, within BACOVA_02979 at 58.496 kb on - strand, within BACOVA_02979 at 58.523 kb on - strand, within BACOVA_02979 at 58.604 kb on - strand, within BACOVA_02979 at 58.633 kb on - strand, within BACOVA_02979 at 58.635 kb on + strand, within BACOVA_02979 at 58.638 kb on + strand, within BACOVA_02979 at 58.639 kb on - strand, within BACOVA_02979 at 58.639 kb on - strand, within BACOVA_02979 at 58.639 kb on - strand, within BACOVA_02979 at 58.667 kb on - strand, within BACOVA_02979 at 58.681 kb on + strand, within BACOVA_02979 at 58.682 kb on - strand, within BACOVA_02979 at 58.682 kb on - strand, within BACOVA_02979 at 58.685 kb on - strand, within BACOVA_02979 at 58.745 kb on - strand, within BACOVA_02979 at 58.750 kb on - strand, within BACOVA_02979 at 58.778 kb on + strand, within BACOVA_02979 at 58.778 kb on + strand, within BACOVA_02979 at 58.779 kb on - strand, within BACOVA_02979 at 58.781 kb on - strand, within BACOVA_02979 at 58.781 kb on - strand, within BACOVA_02979 at 58.847 kb on - strand, within BACOVA_02979 at 58.871 kb on - strand, within BACOVA_02979 at 58.932 kb on + strand, within BACOVA_02979 at 58.932 kb on + strand, within BACOVA_02979 at 58.933 kb on - strand, within BACOVA_02979 at 58.949 kb on - strand, within BACOVA_02979 at 58.982 kb on - strand, within BACOVA_02979 at 59.059 kb on + strand, within BACOVA_02979 at 59.060 kb on - strand, within BACOVA_02979 at 59.069 kb on - strand, within BACOVA_02979 at 59.126 kb on - strand, within BACOVA_02979 at 59.126 kb on - strand, within BACOVA_02979 at 59.159 kb on - strand, within BACOVA_02979 at 59.209 kb on + strand at 59.209 kb on + strand at 59.316 kb on + strand at 59.317 kb on - strand at 59.317 kb on - strand at 59.317 kb on - strand at 59.317 kb on - strand at 59.317 kb on - strand at 59.317 kb on - strand at 59.348 kb on - strand at 59.362 kb on - strand at 59.365 kb on - strand at 59.367 kb on + strand at 59.368 kb on - strand at 59.373 kb on + strand at 59.381 kb on + strand at 59.395 kb on + strand at 59.396 kb on - strand at 59.503 kb on + strand, within BACOVA_02980 at 59.503 kb on + strand, within BACOVA_02980 at 59.504 kb on - strand, within BACOVA_02980 at 59.504 kb on - strand, within BACOVA_02980 at 59.504 kb on - strand, within BACOVA_02980 at 59.506 kb on + strand, within BACOVA_02980 at 59.557 kb on + strand, within BACOVA_02980 at 59.561 kb on - strand, within BACOVA_02980 at 59.562 kb on + strand, within BACOVA_02980 at 59.576 kb on - strand, within BACOVA_02980 at 59.585 kb on - strand, within BACOVA_02980 at 59.624 kb on + strand, within BACOVA_02980 at 59.663 kb on - strand, within BACOVA_02980 at 59.715 kb on + strand, within BACOVA_02980 at 59.746 kb on - strand, within BACOVA_02980 at 59.789 kb on - strand, within BACOVA_02980 at 59.810 kb on + strand, within BACOVA_02980 at 59.811 kb on - strand, within BACOVA_02980 at 59.879 kb on - strand, within BACOVA_02980 at 59.887 kb on - strand, within BACOVA_02980 at 59.966 kb on - strand at 59.969 kb on + strand at 60.067 kb on + strand, within BACOVA_02981 at 60.068 kb on - strand, within BACOVA_02981 at 60.080 kb on - strand, within BACOVA_02981 at 60.085 kb on - strand, within BACOVA_02981 at 60.156 kb on + strand, within BACOVA_02981 at 60.166 kb on + strand, within BACOVA_02981 at 60.167 kb on - strand, within BACOVA_02981 at 60.167 kb on - strand, within BACOVA_02981 at 60.190 kb on + strand, within BACOVA_02981 at 60.193 kb on - strand, within BACOVA_02981 at 60.215 kb on + strand, within BACOVA_02981 at 60.219 kb on + strand, within BACOVA_02981 at 60.219 kb on + strand, within BACOVA_02981 at 60.229 kb on + strand, within BACOVA_02981 at 60.230 kb on - strand, within BACOVA_02981 at 60.230 kb on - strand, within BACOVA_02981 at 60.296 kb on - strand, within BACOVA_02981 at 60.313 kb on + strand, within BACOVA_02981 at 60.356 kb on + strand, within BACOVA_02981 at 60.357 kb on - strand, within BACOVA_02981 at 60.359 kb on - strand, within BACOVA_02981 at 60.359 kb on - strand, within BACOVA_02981
Per-strain Table
Position Strand Gene LocusTag Fraction NAG 10 mM (C) remove 56,372 - BACOVA_02978 0.44 +0.9 56,376 - BACOVA_02978 0.44 +0.5 56,376 - BACOVA_02978 0.44 -1.2 56,376 - BACOVA_02978 0.44 +1.7 56,430 + BACOVA_02978 0.47 +1.2 56,431 - BACOVA_02978 0.47 -0.3 56,448 - BACOVA_02978 0.48 -0.3 56,476 + BACOVA_02978 0.50 -1.0 56,488 - BACOVA_02978 0.51 -1.1 56,488 - BACOVA_02978 0.51 -0.3 56,518 + BACOVA_02978 0.52 +0.0 56,522 - BACOVA_02978 0.53 -2.3 56,522 - BACOVA_02978 0.53 -2.2 56,680 + BACOVA_02978 0.62 -0.3 56,693 - BACOVA_02978 0.63 -0.8 56,695 + BACOVA_02978 0.63 +1.0 56,729 - BACOVA_02978 0.65 -0.0 56,738 - BACOVA_02978 0.65 -3.1 56,738 - BACOVA_02978 0.65 -0.3 56,777 + BACOVA_02978 0.67 -1.6 56,777 + BACOVA_02978 0.67 +0.6 56,778 - BACOVA_02978 0.68 +0.2 56,778 - BACOVA_02978 0.68 -2.3 56,782 + BACOVA_02978 0.68 -0.3 56,783 - BACOVA_02978 0.68 +1.7 56,783 - BACOVA_02978 0.68 +0.2 56,783 - BACOVA_02978 0.68 -1.2 56,783 - BACOVA_02978 0.68 -0.2 56,783 - BACOVA_02978 0.68 -1.1 56,889 + BACOVA_02978 0.74 +0.2 56,910 + BACOVA_02978 0.75 -1.3 56,939 + BACOVA_02978 0.77 +0.2 56,946 - BACOVA_02978 0.77 -0.8 56,946 - BACOVA_02978 0.77 +0.7 56,993 - BACOVA_02978 0.80 -1.1 56,993 - BACOVA_02978 0.80 +0.5 57,027 - BACOVA_02978 0.82 -0.6 57,032 + BACOVA_02978 0.82 -0.3 57,033 - BACOVA_02978 0.82 +1.2 57,082 + BACOVA_02978 0.85 -0.4 57,083 - BACOVA_02978 0.85 -0.7 57,085 + BACOVA_02978 0.86 -0.3 57,171 + -0.3 57,172 - +0.5 57,191 - +0.4 57,304 + +0.7 57,349 + -2.1 57,359 - -2.2 57,362 - -0.3 57,394 - -1.7 57,464 - +1.7 57,487 + -0.1 57,506 + +0.3 57,506 + -0.3 57,506 + -0.5 57,507 - -2.5 57,511 + -0.9 57,517 - +0.2 57,517 - -0.3 57,547 + +0.6 57,548 - +0.2 57,548 - +0.0 57,549 - -0.5 57,559 + BACOVA_02979 0.10 -0.8 57,560 - BACOVA_02979 0.10 -1.0 57,571 + BACOVA_02979 0.11 +0.5 57,572 - BACOVA_02979 0.11 +0.4 57,573 + BACOVA_02979 0.11 -0.6 57,574 - BACOVA_02979 0.11 -0.0 57,604 + BACOVA_02979 0.12 -0.3 57,605 - BACOVA_02979 0.13 -0.8 57,642 + BACOVA_02979 0.14 -0.8 57,642 + BACOVA_02979 0.14 -0.7 57,642 + BACOVA_02979 0.14 +0.6 57,642 + BACOVA_02979 0.14 -0.0 57,646 + BACOVA_02979 0.15 -1.0 57,647 - BACOVA_02979 0.15 +0.2 57,688 + BACOVA_02979 0.17 -0.4 57,700 + BACOVA_02979 0.17 -0.1 57,732 + BACOVA_02979 0.19 -1.0 57,733 - BACOVA_02979 0.19 -0.3 57,733 - BACOVA_02979 0.19 +0.2 57,733 - BACOVA_02979 0.19 -0.1 57,814 + BACOVA_02979 0.23 -1.3 57,899 - BACOVA_02979 0.27 -0.3 57,900 + BACOVA_02979 0.27 +1.7 57,900 + BACOVA_02979 0.27 -0.4 57,900 + BACOVA_02979 0.27 +0.0 57,900 + BACOVA_02979 0.27 +0.3 57,901 - BACOVA_02979 0.27 +0.3 58,025 - BACOVA_02979 0.33 -0.9 58,075 + BACOVA_02979 0.36 +0.7 58,075 + BACOVA_02979 0.36 +0.3 58,076 - BACOVA_02979 0.36 +1.7 58,076 - BACOVA_02979 0.36 -0.6 58,076 - BACOVA_02979 0.36 -2.0 58,138 + BACOVA_02979 0.39 +1.3 58,138 + BACOVA_02979 0.39 -1.0 58,139 - BACOVA_02979 0.39 -1.4 58,165 + BACOVA_02979 0.40 +0.2 58,175 - BACOVA_02979 0.41 -0.5 58,196 - BACOVA_02979 0.42 +0.7 58,225 - BACOVA_02979 0.43 +0.2 58,247 - BACOVA_02979 0.44 +1.0 58,251 + BACOVA_02979 0.44 +1.2 58,273 + BACOVA_02979 0.45 -2.4 58,274 - BACOVA_02979 0.45 -0.3 58,274 - BACOVA_02979 0.45 +0.5 58,276 + BACOVA_02979 0.46 -0.3 58,329 + BACOVA_02979 0.48 -0.3 58,427 - BACOVA_02979 0.53 -1.0 58,433 - BACOVA_02979 0.53 -0.3 58,456 + BACOVA_02979 0.54 +0.4 58,495 + BACOVA_02979 0.56 +0.3 58,496 - BACOVA_02979 0.56 -1.0 58,523 - BACOVA_02979 0.58 +0.7 58,604 - BACOVA_02979 0.62 -1.8 58,633 - BACOVA_02979 0.63 -0.5 58,635 + BACOVA_02979 0.63 +1.7 58,638 + BACOVA_02979 0.63 -0.6 58,639 - BACOVA_02979 0.63 +0.6 58,639 - BACOVA_02979 0.63 -0.2 58,639 - BACOVA_02979 0.63 -1.1 58,667 - BACOVA_02979 0.65 +1.2 58,681 + BACOVA_02979 0.65 +2.3 58,682 - BACOVA_02979 0.65 +0.5 58,682 - BACOVA_02979 0.65 -0.2 58,685 - BACOVA_02979 0.66 -0.2 58,745 - BACOVA_02979 0.69 +1.3 58,750 - BACOVA_02979 0.69 +3.2 58,778 + BACOVA_02979 0.70 -0.6 58,778 + BACOVA_02979 0.70 -0.6 58,779 - BACOVA_02979 0.70 +0.1 58,781 - BACOVA_02979 0.70 -1.0 58,781 - BACOVA_02979 0.70 +0.0 58,847 - BACOVA_02979 0.74 +0.6 58,871 - BACOVA_02979 0.75 +0.1 58,932 + BACOVA_02979 0.78 -0.1 58,932 + BACOVA_02979 0.78 +0.9 58,933 - BACOVA_02979 0.78 +1.7 58,949 - BACOVA_02979 0.79 -0.4 58,982 - BACOVA_02979 0.80 -0.9 59,059 + BACOVA_02979 0.84 -1.0 59,060 - BACOVA_02979 0.84 +0.8 59,069 - BACOVA_02979 0.85 -0.4 59,126 - BACOVA_02979 0.87 +0.7 59,126 - BACOVA_02979 0.87 +0.2 59,159 - BACOVA_02979 0.89 +3.1 59,209 + +0.2 59,209 + +0.7 59,316 + +1.2 59,317 - -1.2 59,317 - -0.3 59,317 - +0.6 59,317 - -0.3 59,317 - -0.6 59,317 - -1.0 59,348 - -0.7 59,362 - +3.3 59,365 - +0.3 59,367 + -0.4 59,368 - -1.2 59,373 + -1.6 59,381 + -1.3 59,395 + +2.2 59,396 - +1.0 59,503 + BACOVA_02980 0.12 +0.0 59,503 + BACOVA_02980 0.12 +1.9 59,504 - BACOVA_02980 0.12 -0.6 59,504 - BACOVA_02980 0.12 +0.0 59,504 - BACOVA_02980 0.12 -0.6 59,506 + BACOVA_02980 0.12 +1.3 59,557 + BACOVA_02980 0.22 -0.1 59,561 - BACOVA_02980 0.23 +0.2 59,562 + BACOVA_02980 0.23 +1.2 59,576 - BACOVA_02980 0.25 +0.5 59,585 - BACOVA_02980 0.27 +0.6 59,624 + BACOVA_02980 0.34 -1.1 59,663 - BACOVA_02980 0.42 +0.1 59,715 + BACOVA_02980 0.52 -0.4 59,746 - BACOVA_02980 0.57 -0.3 59,789 - BACOVA_02980 0.66 +0.9 59,810 + BACOVA_02980 0.69 -0.8 59,811 - BACOVA_02980 0.70 -1.0 59,879 - BACOVA_02980 0.82 -0.1 59,887 - BACOVA_02980 0.84 -0.8 59,966 - +0.3 59,969 + +0.7 60,067 + BACOVA_02981 0.11 +1.3 60,068 - BACOVA_02981 0.11 -0.5 60,080 - BACOVA_02981 0.12 -0.4 60,085 - BACOVA_02981 0.13 -0.8 60,156 + BACOVA_02981 0.21 +0.5 60,166 + BACOVA_02981 0.22 +0.6 60,167 - BACOVA_02981 0.22 +0.2 60,167 - BACOVA_02981 0.22 -1.2 60,190 + BACOVA_02981 0.25 -0.7 60,193 - BACOVA_02981 0.25 -0.3 60,215 + BACOVA_02981 0.27 -1.2 60,219 + BACOVA_02981 0.28 -0.7 60,219 + BACOVA_02981 0.28 -1.3 60,229 + BACOVA_02981 0.29 -1.2 60,230 - BACOVA_02981 0.29 +0.5 60,230 - BACOVA_02981 0.29 +1.1 60,296 - BACOVA_02981 0.37 -0.6 60,313 + BACOVA_02981 0.39 -1.0 60,356 + BACOVA_02981 0.43 -2.9 60,357 - BACOVA_02981 0.44 -0.6 60,359 - BACOVA_02981 0.44 +0.2 60,359 - BACOVA_02981 0.44 -1.1
Or see this region's nucleotide sequence