Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_02259

Experiment: NAG 10 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_02258 and BACOVA_02259 are separated by 139 nucleotidesBACOVA_02259 and BACOVA_02260 are separated by 155 nucleotides BACOVA_02258: BACOVA_02258 - GTP-binding protein LepA, at 33,365 to 35,146 _02258 BACOVA_02259: BACOVA_02259 - hypothetical protein, at 35,286 to 36,464 _02259 BACOVA_02260: BACOVA_02260 - RmuC domain protein, at 36,620 to 37,855 _02260 Position (kb) 35 36 37Strain fitness (log2 ratio) -2 -1 0 1 2 3at 34.450 kb on + strand, within BACOVA_02258at 34.450 kb on + strand, within BACOVA_02258at 34.476 kb on + strand, within BACOVA_02258at 34.477 kb on - strand, within BACOVA_02258at 34.479 kb on - strand, within BACOVA_02258at 34.522 kb on + strand, within BACOVA_02258at 34.564 kb on + strand, within BACOVA_02258at 34.656 kb on - strand, within BACOVA_02258at 34.657 kb on + strand, within BACOVA_02258at 34.658 kb on - strand, within BACOVA_02258at 34.685 kb on + strand, within BACOVA_02258at 34.751 kb on + strand, within BACOVA_02258at 34.767 kb on - strand, within BACOVA_02258at 34.846 kb on + strand, within BACOVA_02258at 34.912 kb on + strand, within BACOVA_02258at 35.018 kb on + strandat 35.018 kb on + strandat 35.213 kb on + strandat 35.213 kb on + strandat 35.214 kb on - strandat 35.280 kb on - strandat 35.281 kb on + strandat 35.282 kb on - strandat 35.402 kb on - strandat 35.402 kb on - strandat 35.407 kb on - strand, within BACOVA_02259at 35.417 kb on + strand, within BACOVA_02259at 35.417 kb on + strand, within BACOVA_02259at 35.425 kb on + strand, within BACOVA_02259at 35.433 kb on - strand, within BACOVA_02259at 35.491 kb on - strand, within BACOVA_02259at 35.497 kb on - strand, within BACOVA_02259at 35.528 kb on + strand, within BACOVA_02259at 35.529 kb on - strand, within BACOVA_02259at 35.529 kb on - strand, within BACOVA_02259at 35.544 kb on + strand, within BACOVA_02259at 35.545 kb on - strand, within BACOVA_02259at 35.579 kb on + strand, within BACOVA_02259at 35.611 kb on + strand, within BACOVA_02259at 35.694 kb on - strand, within BACOVA_02259at 35.701 kb on + strand, within BACOVA_02259at 35.702 kb on - strand, within BACOVA_02259at 35.707 kb on + strand, within BACOVA_02259at 35.708 kb on - strand, within BACOVA_02259at 35.708 kb on - strand, within BACOVA_02259at 35.792 kb on + strand, within BACOVA_02259at 35.850 kb on + strand, within BACOVA_02259at 35.900 kb on - strand, within BACOVA_02259at 35.918 kb on - strand, within BACOVA_02259at 35.923 kb on - strand, within BACOVA_02259at 35.943 kb on + strand, within BACOVA_02259at 35.944 kb on - strand, within BACOVA_02259at 35.960 kb on + strand, within BACOVA_02259at 35.960 kb on + strand, within BACOVA_02259at 35.967 kb on - strand, within BACOVA_02259at 35.999 kb on + strand, within BACOVA_02259at 36.000 kb on - strand, within BACOVA_02259at 36.005 kb on + strand, within BACOVA_02259at 36.006 kb on - strand, within BACOVA_02259at 36.015 kb on - strand, within BACOVA_02259at 36.104 kb on + strand, within BACOVA_02259at 36.141 kb on + strand, within BACOVA_02259at 36.142 kb on - strand, within BACOVA_02259at 36.186 kb on - strand, within BACOVA_02259at 36.186 kb on - strand, within BACOVA_02259at 36.186 kb on - strand, within BACOVA_02259at 36.186 kb on - strand, within BACOVA_02259at 36.221 kb on + strand, within BACOVA_02259at 36.224 kb on - strand, within BACOVA_02259at 36.249 kb on + strand, within BACOVA_02259at 36.249 kb on + strand, within BACOVA_02259at 36.265 kb on + strand, within BACOVA_02259at 36.346 kb on - strand, within BACOVA_02259at 36.347 kb on + strandat 36.347 kb on + strandat 36.347 kb on + strandat 36.383 kb on + strandat 36.474 kb on + strandat 36.500 kb on - strandat 36.552 kb on - strandat 36.566 kb on + strandat 36.573 kb on - strandat 36.596 kb on + strandat 36.608 kb on - strandat 36.614 kb on + strandat 36.614 kb on + strandat 36.614 kb on + strandat 36.621 kb on + strandat 36.622 kb on - strandat 36.644 kb on + strandat 36.791 kb on - strand, within BACOVA_02260at 36.792 kb on - strand, within BACOVA_02260at 36.912 kb on - strand, within BACOVA_02260at 36.940 kb on + strand, within BACOVA_02260at 36.940 kb on + strand, within BACOVA_02260at 36.941 kb on - strand, within BACOVA_02260at 36.941 kb on - strand, within BACOVA_02260at 36.984 kb on - strand, within BACOVA_02260at 36.993 kb on + strand, within BACOVA_02260at 36.994 kb on - strand, within BACOVA_02260at 36.994 kb on - strand, within BACOVA_02260at 36.995 kb on + strand, within BACOVA_02260at 36.995 kb on + strand, within BACOVA_02260at 36.995 kb on + strand, within BACOVA_02260at 36.996 kb on - strand, within BACOVA_02260at 36.996 kb on - strand, within BACOVA_02260at 36.996 kb on - strand, within BACOVA_02260at 36.996 kb on - strand, within BACOVA_02260at 37.037 kb on - strand, within BACOVA_02260at 37.049 kb on + strand, within BACOVA_02260at 37.049 kb on + strand, within BACOVA_02260at 37.050 kb on - strand, within BACOVA_02260at 37.050 kb on - strand, within BACOVA_02260at 37.057 kb on + strand, within BACOVA_02260at 37.057 kb on + strand, within BACOVA_02260at 37.155 kb on + strand, within BACOVA_02260at 37.156 kb on - strand, within BACOVA_02260at 37.156 kb on - strand, within BACOVA_02260at 37.164 kb on + strand, within BACOVA_02260at 37.164 kb on + strand, within BACOVA_02260at 37.167 kb on - strand, within BACOVA_02260at 37.200 kb on + strand, within BACOVA_02260at 37.200 kb on + strand, within BACOVA_02260at 37.319 kb on + strand, within BACOVA_02260at 37.365 kb on - strand, within BACOVA_02260

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Per-strain Table

Position Strand Gene LocusTag Fraction NAG 10 mM (C)
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34,450 + BACOVA_02258 0.61 -1.1
34,450 + BACOVA_02258 0.61 +0.9
34,476 + BACOVA_02258 0.62 -0.5
34,477 - BACOVA_02258 0.62 -0.8
34,479 - BACOVA_02258 0.63 -0.5
34,522 + BACOVA_02258 0.65 -0.8
34,564 + BACOVA_02258 0.67 -0.8
34,656 - BACOVA_02258 0.72 -0.1
34,657 + BACOVA_02258 0.73 -0.5
34,658 - BACOVA_02258 0.73 -0.1
34,685 + BACOVA_02258 0.74 +2.2
34,751 + BACOVA_02258 0.78 -0.5
34,767 - BACOVA_02258 0.79 +1.5
34,846 + BACOVA_02258 0.83 +0.5
34,912 + BACOVA_02258 0.87 -1.7
35,018 + -0.5
35,018 + +0.2
35,213 + +0.5
35,213 + -1.5
35,214 - +0.1
35,280 - +0.5
35,281 + -0.3
35,282 - -0.3
35,402 - -1.1
35,402 - -1.5
35,407 - BACOVA_02259 0.10 +0.1
35,417 + BACOVA_02259 0.11 -1.3
35,417 + BACOVA_02259 0.11 +0.1
35,425 + BACOVA_02259 0.12 +0.9
35,433 - BACOVA_02259 0.12 +0.5
35,491 - BACOVA_02259 0.17 -0.4
35,497 - BACOVA_02259 0.18 +0.2
35,528 + BACOVA_02259 0.21 -1.3
35,529 - BACOVA_02259 0.21 -0.5
35,529 - BACOVA_02259 0.21 -0.3
35,544 + BACOVA_02259 0.22 -0.5
35,545 - BACOVA_02259 0.22 -0.1
35,579 + BACOVA_02259 0.25 +3.5
35,611 + BACOVA_02259 0.28 -1.0
35,694 - BACOVA_02259 0.35 +0.2
35,701 + BACOVA_02259 0.35 -1.2
35,702 - BACOVA_02259 0.35 -0.4
35,707 + BACOVA_02259 0.36 +0.9
35,708 - BACOVA_02259 0.36 -1.0
35,708 - BACOVA_02259 0.36 -0.8
35,792 + BACOVA_02259 0.43 -1.0
35,850 + BACOVA_02259 0.48 -0.9
35,900 - BACOVA_02259 0.52 -2.4
35,918 - BACOVA_02259 0.54 +0.5
35,923 - BACOVA_02259 0.54 -0.8
35,943 + BACOVA_02259 0.56 +1.5
35,944 - BACOVA_02259 0.56 +0.2
35,960 + BACOVA_02259 0.57 +0.1
35,960 + BACOVA_02259 0.57 +1.5
35,967 - BACOVA_02259 0.58 +0.8
35,999 + BACOVA_02259 0.60 +0.7
36,000 - BACOVA_02259 0.61 +0.3
36,005 + BACOVA_02259 0.61 -1.3
36,006 - BACOVA_02259 0.61 +0.9
36,015 - BACOVA_02259 0.62 -0.3
36,104 + BACOVA_02259 0.69 -0.1
36,141 + BACOVA_02259 0.73 -0.1
36,142 - BACOVA_02259 0.73 +0.3
36,186 - BACOVA_02259 0.76 -1.3
36,186 - BACOVA_02259 0.76 -0.7
36,186 - BACOVA_02259 0.76 +0.1
36,186 - BACOVA_02259 0.76 +0.8
36,221 + BACOVA_02259 0.79 -0.5
36,224 - BACOVA_02259 0.80 -2.0
36,249 + BACOVA_02259 0.82 +0.2
36,249 + BACOVA_02259 0.82 +0.8
36,265 + BACOVA_02259 0.83 +0.6
36,346 - BACOVA_02259 0.90 -0.7
36,347 + +1.1
36,347 + -0.1
36,347 + -0.7
36,383 + -0.1
36,474 + +1.1
36,500 - -0.4
36,552 - -1.9
36,566 + -1.7
36,573 - -1.0
36,596 + -1.2
36,608 - -0.7
36,614 + -0.4
36,614 + -0.2
36,614 + +0.7
36,621 + -0.5
36,622 - -1.4
36,644 + +0.9
36,791 - BACOVA_02260 0.14 +0.1
36,792 - BACOVA_02260 0.14 +1.0
36,912 - BACOVA_02260 0.24 -0.3
36,940 + BACOVA_02260 0.26 +0.0
36,940 + BACOVA_02260 0.26 -0.9
36,941 - BACOVA_02260 0.26 +1.2
36,941 - BACOVA_02260 0.26 +0.2
36,984 - BACOVA_02260 0.29 +0.5
36,993 + BACOVA_02260 0.30 +3.5
36,994 - BACOVA_02260 0.30 -1.1
36,994 - BACOVA_02260 0.30 -0.6
36,995 + BACOVA_02260 0.30 +0.8
36,995 + BACOVA_02260 0.30 +0.7
36,995 + BACOVA_02260 0.30 +0.8
36,996 - BACOVA_02260 0.30 +0.8
36,996 - BACOVA_02260 0.30 +0.4
36,996 - BACOVA_02260 0.30 -1.8
36,996 - BACOVA_02260 0.30 +0.0
37,037 - BACOVA_02260 0.34 -1.4
37,049 + BACOVA_02260 0.35 -0.3
37,049 + BACOVA_02260 0.35 -0.3
37,050 - BACOVA_02260 0.35 +0.6
37,050 - BACOVA_02260 0.35 -0.2
37,057 + BACOVA_02260 0.35 +0.1
37,057 + BACOVA_02260 0.35 +0.0
37,155 + BACOVA_02260 0.43 +0.5
37,156 - BACOVA_02260 0.43 +0.1
37,156 - BACOVA_02260 0.43 -0.6
37,164 + BACOVA_02260 0.44 -0.8
37,164 + BACOVA_02260 0.44 -0.1
37,167 - BACOVA_02260 0.44 +0.6
37,200 + BACOVA_02260 0.47 -2.0
37,200 + BACOVA_02260 0.47 -1.2
37,319 + BACOVA_02260 0.57 +2.5
37,365 - BACOVA_02260 0.60 -1.0

Or see this region's nucleotide sequence