Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_01694

Experiment: NAG 10 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_01689 and BACOVA_01690 overlap by 4 nucleotidesBACOVA_01690 and BACOVA_01691 are separated by 158 nucleotidesBACOVA_01691 and BACOVA_01692 are separated by 119 nucleotidesBACOVA_01692 and BACOVA_01693 overlap by 44 nucleotidesBACOVA_01693 and BACOVA_01694 are separated by 115 nucleotidesBACOVA_01694 and BACOVA_01695 are separated by 60 nucleotides BACOVA_01689: BACOVA_01689 - hypothetical protein, at 111,109 to 111,522 _01689 BACOVA_01690: BACOVA_01690 - hypothetical protein, at 111,519 to 111,746 _01690 BACOVA_01691: BACOVA_01691 - bacterial transferase hexapeptide repeat protein, at 111,905 to 112,090 _01691 BACOVA_01692: BACOVA_01692 - hypothetical protein, at 112,210 to 112,320 _01692 BACOVA_01693: BACOVA_01693 - hypothetical protein, at 112,277 to 112,366 _01693 BACOVA_01694: BACOVA_01694 - hypothetical protein, at 112,482 to 113,030 _01694 BACOVA_01695: BACOVA_01695 - hypothetical protein, at 113,091 to 114,881 _01695 Position (kb) 112 113 114Strain fitness (log2 ratio) -2 -1 0 1 2at 111.482 kb on - strandat 111.526 kb on - strandat 111.526 kb on - strandat 111.590 kb on + strand, within BACOVA_01690at 111.590 kb on + strand, within BACOVA_01690at 111.590 kb on + strand, within BACOVA_01690at 111.605 kb on - strand, within BACOVA_01690at 111.653 kb on - strand, within BACOVA_01690at 111.676 kb on + strand, within BACOVA_01690at 111.697 kb on - strand, within BACOVA_01690at 111.698 kb on + strand, within BACOVA_01690at 111.698 kb on + strand, within BACOVA_01690at 111.698 kb on + strand, within BACOVA_01690at 111.698 kb on + strand, within BACOVA_01690at 111.699 kb on - strand, within BACOVA_01690at 111.699 kb on - strand, within BACOVA_01690at 111.781 kb on - strandat 111.786 kb on + strandat 111.850 kb on - strandat 111.850 kb on - strandat 111.850 kb on - strandat 111.852 kb on + strandat 111.857 kb on - strandat 111.904 kb on + strandat 111.969 kb on + strand, within BACOVA_01691at 111.970 kb on - strand, within BACOVA_01691at 112.016 kb on - strand, within BACOVA_01691at 112.088 kb on + strandat 112.091 kb on + strandat 112.091 kb on + strandat 112.091 kb on + strandat 112.092 kb on - strandat 112.115 kb on + strandat 112.122 kb on + strandat 112.122 kb on + strandat 112.123 kb on - strandat 112.123 kb on - strandat 112.125 kb on - strandat 112.144 kb on - strandat 112.160 kb on - strandat 112.165 kb on + strandat 112.174 kb on + strandat 112.175 kb on - strandat 112.175 kb on - strandat 112.175 kb on - strandat 112.179 kb on + strandat 112.180 kb on - strandat 112.189 kb on - strandat 112.192 kb on + strandat 112.192 kb on + strandat 112.342 kb on + strand, within BACOVA_01693at 112.411 kb on + strandat 112.412 kb on - strandat 112.466 kb on + strandat 112.471 kb on - strandat 112.490 kb on + strandat 112.493 kb on - strandat 112.493 kb on - strandat 112.504 kb on + strandat 112.505 kb on - strandat 112.532 kb on + strandat 112.561 kb on + strand, within BACOVA_01694at 112.561 kb on + strand, within BACOVA_01694at 112.613 kb on - strand, within BACOVA_01694at 112.669 kb on + strand, within BACOVA_01694at 112.670 kb on - strand, within BACOVA_01694at 112.806 kb on - strand, within BACOVA_01694at 112.838 kb on + strand, within BACOVA_01694at 112.838 kb on + strand, within BACOVA_01694at 112.839 kb on - strand, within BACOVA_01694at 112.876 kb on + strand, within BACOVA_01694at 112.923 kb on - strand, within BACOVA_01694at 112.923 kb on - strand, within BACOVA_01694at 112.934 kb on + strand, within BACOVA_01694at 112.934 kb on + strand, within BACOVA_01694at 112.935 kb on - strand, within BACOVA_01694at 112.938 kb on + strand, within BACOVA_01694at 112.965 kb on - strand, within BACOVA_01694at 113.045 kb on + strandat 113.058 kb on - strandat 113.058 kb on - strandat 113.093 kb on - strandat 113.131 kb on - strandat 113.131 kb on - strandat 113.136 kb on + strandat 113.165 kb on + strandat 113.166 kb on - strandat 113.306 kb on - strand, within BACOVA_01695at 113.308 kb on - strand, within BACOVA_01695at 113.377 kb on + strand, within BACOVA_01695at 113.590 kb on + strand, within BACOVA_01695at 113.648 kb on + strand, within BACOVA_01695at 113.756 kb on + strand, within BACOVA_01695at 113.759 kb on - strand, within BACOVA_01695at 113.829 kb on - strand, within BACOVA_01695at 113.853 kb on + strand, within BACOVA_01695at 113.854 kb on - strand, within BACOVA_01695at 113.858 kb on + strand, within BACOVA_01695at 113.895 kb on + strand, within BACOVA_01695at 113.896 kb on - strand, within BACOVA_01695at 113.896 kb on - strand, within BACOVA_01695at 113.935 kb on + strand, within BACOVA_01695at 113.983 kb on + strand, within BACOVA_01695at 113.984 kb on - strand, within BACOVA_01695

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Per-strain Table

Position Strand Gene LocusTag Fraction NAG 10 mM (C)
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111,482 - -1.4
111,526 - +0.2
111,526 - -1.9
111,590 + BACOVA_01690 0.31 -0.4
111,590 + BACOVA_01690 0.31 +0.5
111,590 + BACOVA_01690 0.31 -0.9
111,605 - BACOVA_01690 0.38 +0.5
111,653 - BACOVA_01690 0.59 +1.5
111,676 + BACOVA_01690 0.69 +1.7
111,697 - BACOVA_01690 0.78 +0.4
111,698 + BACOVA_01690 0.79 -0.3
111,698 + BACOVA_01690 0.79 +0.2
111,698 + BACOVA_01690 0.79 -0.0
111,698 + BACOVA_01690 0.79 -2.5
111,699 - BACOVA_01690 0.79 -0.3
111,699 - BACOVA_01690 0.79 -2.0
111,781 - -1.5
111,786 + -0.8
111,850 - -0.0
111,850 - +0.7
111,850 - -2.1
111,852 + +0.1
111,857 - -0.5
111,904 + +0.8
111,969 + BACOVA_01691 0.34 -0.1
111,970 - BACOVA_01691 0.35 -1.9
112,016 - BACOVA_01691 0.60 -0.6
112,088 + -0.8
112,091 + -0.8
112,091 + +0.5
112,091 + -1.5
112,092 - -1.4
112,115 + +0.1
112,122 + +0.1
112,122 + +1.5
112,123 - +0.3
112,123 - +0.9
112,125 - -0.7
112,144 - -0.8
112,160 - +1.9
112,165 + -1.8
112,174 + +1.7
112,175 - +0.2
112,175 - +0.9
112,175 - -1.3
112,179 + -0.1
112,180 - +0.8
112,189 - +1.5
112,192 + -1.8
112,192 + -0.9
112,342 + BACOVA_01693 0.72 +0.9
112,411 + +0.3
112,412 - +0.8
112,466 + -0.1
112,471 - -0.9
112,490 + -0.8
112,493 - +0.8
112,493 - -0.3
112,504 + +0.7
112,505 - +0.5
112,532 + -2.6
112,561 + BACOVA_01694 0.14 +0.5
112,561 + BACOVA_01694 0.14 +0.5
112,613 - BACOVA_01694 0.24 -0.1
112,669 + BACOVA_01694 0.34 +1.0
112,670 - BACOVA_01694 0.34 -0.4
112,806 - BACOVA_01694 0.59 -1.1
112,838 + BACOVA_01694 0.65 -0.6
112,838 + BACOVA_01694 0.65 +0.8
112,839 - BACOVA_01694 0.65 -0.1
112,876 + BACOVA_01694 0.72 -0.8
112,923 - BACOVA_01694 0.80 +1.3
112,923 - BACOVA_01694 0.80 -1.3
112,934 + BACOVA_01694 0.82 -0.6
112,934 + BACOVA_01694 0.82 -1.3
112,935 - BACOVA_01694 0.83 -1.0
112,938 + BACOVA_01694 0.83 +0.8
112,965 - BACOVA_01694 0.88 -0.6
113,045 + +0.5
113,058 - -0.8
113,058 - -0.9
113,093 - -0.9
113,131 - -0.1
113,131 - -0.1
113,136 + +0.5
113,165 + -0.5
113,166 - +0.2
113,306 - BACOVA_01695 0.12 +0.1
113,308 - BACOVA_01695 0.12 -0.1
113,377 + BACOVA_01695 0.16 -0.1
113,590 + BACOVA_01695 0.28 -1.1
113,648 + BACOVA_01695 0.31 -0.9
113,756 + BACOVA_01695 0.37 +0.7
113,759 - BACOVA_01695 0.37 +0.1
113,829 - BACOVA_01695 0.41 -0.1
113,853 + BACOVA_01695 0.43 +0.3
113,854 - BACOVA_01695 0.43 +0.9
113,858 + BACOVA_01695 0.43 +1.5
113,895 + BACOVA_01695 0.45 -1.5
113,896 - BACOVA_01695 0.45 +0.5
113,896 - BACOVA_01695 0.45 -0.8
113,935 + BACOVA_01695 0.47 +0.7
113,983 + BACOVA_01695 0.50 +0.3
113,984 - BACOVA_01695 0.50 +0.8

Or see this region's nucleotide sequence