Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_01384

Experiment: NAG 10 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_01382 and BACOVA_01383 are separated by 3 nucleotidesBACOVA_01383 and BACOVA_01384 are separated by 63 nucleotidesBACOVA_01384 and BACOVA_01386 are separated by 10 nucleotides BACOVA_01382: BACOVA_01382 - hypothetical protein, at 44,163 to 45,599 _01382 BACOVA_01383: BACOVA_01383 - hypothetical protein, at 45,603 to 46,166 _01383 BACOVA_01384: BACOVA_01384 - hypothetical protein, at 46,230 to 47,708 _01384 BACOVA_01386: BACOVA_01386 - TonB-linked outer membrane protein, SusC/RagA family, at 47,719 to 50,976 _01386 Position (kb) 46 47 48Strain fitness (log2 ratio) -2 -1 0 1 2at 45.280 kb on + strand, within BACOVA_01382at 45.311 kb on - strand, within BACOVA_01382at 45.316 kb on + strand, within BACOVA_01382at 45.317 kb on - strand, within BACOVA_01382at 45.355 kb on + strand, within BACOVA_01382at 45.487 kb on + strandat 45.488 kb on + strandat 45.489 kb on - strandat 45.489 kb on - strandat 45.503 kb on + strandat 45.615 kb on + strandat 45.641 kb on + strandat 45.695 kb on + strand, within BACOVA_01383at 45.731 kb on + strand, within BACOVA_01383at 45.731 kb on + strand, within BACOVA_01383at 45.750 kb on - strand, within BACOVA_01383at 45.791 kb on + strand, within BACOVA_01383at 45.792 kb on - strand, within BACOVA_01383at 45.796 kb on + strand, within BACOVA_01383at 45.796 kb on + strand, within BACOVA_01383at 45.800 kb on + strand, within BACOVA_01383at 45.827 kb on + strand, within BACOVA_01383at 45.861 kb on - strand, within BACOVA_01383at 45.873 kb on + strand, within BACOVA_01383at 45.873 kb on + strand, within BACOVA_01383at 45.874 kb on - strand, within BACOVA_01383at 45.874 kb on - strand, within BACOVA_01383at 45.880 kb on + strand, within BACOVA_01383at 45.891 kb on - strand, within BACOVA_01383at 45.908 kb on + strand, within BACOVA_01383at 45.941 kb on - strand, within BACOVA_01383at 45.999 kb on - strand, within BACOVA_01383at 46.032 kb on - strand, within BACOVA_01383at 46.073 kb on + strand, within BACOVA_01383at 46.073 kb on + strand, within BACOVA_01383at 46.073 kb on + strand, within BACOVA_01383at 46.074 kb on - strand, within BACOVA_01383at 46.122 kb on + strandat 46.125 kb on - strandat 46.129 kb on - strandat 46.142 kb on + strandat 46.143 kb on - strandat 46.149 kb on + strandat 46.149 kb on + strandat 46.197 kb on + strandat 46.197 kb on + strandat 46.197 kb on + strandat 46.198 kb on - strandat 46.231 kb on + strandat 46.232 kb on - strandat 46.307 kb on + strandat 46.330 kb on + strandat 46.331 kb on - strandat 46.335 kb on - strandat 46.359 kb on - strandat 46.387 kb on - strand, within BACOVA_01384at 46.409 kb on + strand, within BACOVA_01384at 46.513 kb on + strand, within BACOVA_01384at 46.590 kb on - strand, within BACOVA_01384at 46.590 kb on - strand, within BACOVA_01384at 46.673 kb on + strand, within BACOVA_01384at 46.673 kb on + strand, within BACOVA_01384at 46.674 kb on - strand, within BACOVA_01384at 46.754 kb on - strand, within BACOVA_01384at 46.792 kb on + strand, within BACOVA_01384at 46.792 kb on + strand, within BACOVA_01384at 46.792 kb on + strand, within BACOVA_01384at 46.792 kb on + strand, within BACOVA_01384at 46.792 kb on + strand, within BACOVA_01384at 46.858 kb on + strand, within BACOVA_01384at 46.958 kb on - strand, within BACOVA_01384at 46.982 kb on + strand, within BACOVA_01384at 47.107 kb on + strand, within BACOVA_01384at 47.132 kb on - strand, within BACOVA_01384at 47.197 kb on + strand, within BACOVA_01384at 47.197 kb on + strand, within BACOVA_01384at 47.232 kb on + strand, within BACOVA_01384at 47.326 kb on - strand, within BACOVA_01384at 47.327 kb on + strand, within BACOVA_01384at 47.328 kb on - strand, within BACOVA_01384at 47.328 kb on - strand, within BACOVA_01384at 47.335 kb on + strand, within BACOVA_01384at 47.335 kb on + strand, within BACOVA_01384at 47.335 kb on + strand, within BACOVA_01384at 47.410 kb on + strand, within BACOVA_01384at 47.410 kb on + strand, within BACOVA_01384at 47.413 kb on + strand, within BACOVA_01384at 47.453 kb on - strand, within BACOVA_01384at 47.453 kb on - strand, within BACOVA_01384at 47.513 kb on + strand, within BACOVA_01384at 47.514 kb on - strand, within BACOVA_01384at 47.540 kb on - strand, within BACOVA_01384at 47.612 kb on + strandat 47.612 kb on + strandat 47.676 kb on + strandat 47.676 kb on + strandat 47.679 kb on + strandat 47.696 kb on + strandat 47.734 kb on - strandat 47.848 kb on - strandat 47.867 kb on + strandat 47.868 kb on - strandat 47.928 kb on - strandat 48.002 kb on + strandat 48.009 kb on + strandat 48.011 kb on + strandat 48.011 kb on + strandat 48.012 kb on - strandat 48.302 kb on + strand, within BACOVA_01386at 48.302 kb on + strand, within BACOVA_01386at 48.303 kb on - strand, within BACOVA_01386at 48.303 kb on - strand, within BACOVA_01386at 48.410 kb on - strand, within BACOVA_01386at 48.417 kb on + strand, within BACOVA_01386at 48.418 kb on - strand, within BACOVA_01386at 48.418 kb on - strand, within BACOVA_01386at 48.419 kb on + strand, within BACOVA_01386at 48.419 kb on + strand, within BACOVA_01386at 48.556 kb on - strand, within BACOVA_01386at 48.584 kb on - strand, within BACOVA_01386at 48.645 kb on + strand, within BACOVA_01386at 48.645 kb on + strand, within BACOVA_01386at 48.657 kb on - strand, within BACOVA_01386

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Per-strain Table

Position Strand Gene LocusTag Fraction NAG 10 mM (C)
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45,280 + BACOVA_01382 0.78 -0.5
45,311 - BACOVA_01382 0.80 -0.0
45,316 + BACOVA_01382 0.80 +0.6
45,317 - BACOVA_01382 0.80 +0.4
45,355 + BACOVA_01382 0.83 +0.9
45,487 + +0.1
45,488 + -1.0
45,489 - -0.0
45,489 - -0.9
45,503 + -1.5
45,615 + +0.1
45,641 + -0.9
45,695 + BACOVA_01383 0.16 -0.3
45,731 + BACOVA_01383 0.23 -0.9
45,731 + BACOVA_01383 0.23 +0.1
45,750 - BACOVA_01383 0.26 -1.3
45,791 + BACOVA_01383 0.33 -0.1
45,792 - BACOVA_01383 0.34 -0.9
45,796 + BACOVA_01383 0.34 -0.0
45,796 + BACOVA_01383 0.34 -0.1
45,800 + BACOVA_01383 0.35 -0.6
45,827 + BACOVA_01383 0.40 -1.9
45,861 - BACOVA_01383 0.46 +1.7
45,873 + BACOVA_01383 0.48 -0.5
45,873 + BACOVA_01383 0.48 -0.3
45,874 - BACOVA_01383 0.48 -0.5
45,874 - BACOVA_01383 0.48 -1.0
45,880 + BACOVA_01383 0.49 -0.0
45,891 - BACOVA_01383 0.51 +0.1
45,908 + BACOVA_01383 0.54 -0.0
45,941 - BACOVA_01383 0.60 -0.8
45,999 - BACOVA_01383 0.70 -0.8
46,032 - BACOVA_01383 0.76 +0.5
46,073 + BACOVA_01383 0.83 -0.3
46,073 + BACOVA_01383 0.83 -0.9
46,073 + BACOVA_01383 0.83 -1.4
46,074 - BACOVA_01383 0.84 +0.4
46,122 + -0.5
46,125 - +1.1
46,129 - +0.2
46,142 + -0.6
46,143 - -0.6
46,149 + -1.0
46,149 + -0.9
46,197 + +0.4
46,197 + +0.7
46,197 + -0.6
46,198 - +0.7
46,231 + +0.9
46,232 - +1.5
46,307 + +1.1
46,330 + -1.0
46,331 - -1.7
46,335 - -0.8
46,359 - -0.3
46,387 - BACOVA_01384 0.11 -1.3
46,409 + BACOVA_01384 0.12 -0.5
46,513 + BACOVA_01384 0.19 -0.5
46,590 - BACOVA_01384 0.24 -0.1
46,590 - BACOVA_01384 0.24 -0.2
46,673 + BACOVA_01384 0.30 +0.7
46,673 + BACOVA_01384 0.30 +1.4
46,674 - BACOVA_01384 0.30 +0.7
46,754 - BACOVA_01384 0.35 +0.7
46,792 + BACOVA_01384 0.38 +0.7
46,792 + BACOVA_01384 0.38 -0.9
46,792 + BACOVA_01384 0.38 -2.6
46,792 + BACOVA_01384 0.38 -2.2
46,792 + BACOVA_01384 0.38 -1.7
46,858 + BACOVA_01384 0.42 +0.1
46,958 - BACOVA_01384 0.49 -2.5
46,982 + BACOVA_01384 0.51 -1.1
47,107 + BACOVA_01384 0.59 -1.5
47,132 - BACOVA_01384 0.61 -1.1
47,197 + BACOVA_01384 0.65 -0.2
47,197 + BACOVA_01384 0.65 -0.8
47,232 + BACOVA_01384 0.68 -0.8
47,326 - BACOVA_01384 0.74 -1.5
47,327 + BACOVA_01384 0.74 -0.6
47,328 - BACOVA_01384 0.74 -0.9
47,328 - BACOVA_01384 0.74 -0.1
47,335 + BACOVA_01384 0.75 -0.9
47,335 + BACOVA_01384 0.75 -0.0
47,335 + BACOVA_01384 0.75 +0.1
47,410 + BACOVA_01384 0.80 +0.3
47,410 + BACOVA_01384 0.80 -0.0
47,413 + BACOVA_01384 0.80 +0.5
47,453 - BACOVA_01384 0.83 +0.8
47,453 - BACOVA_01384 0.83 -1.1
47,513 + BACOVA_01384 0.87 +0.4
47,514 - BACOVA_01384 0.87 -1.8
47,540 - BACOVA_01384 0.89 +0.1
47,612 + -0.6
47,612 + +0.3
47,676 + -0.3
47,676 + +2.3
47,679 + +0.3
47,696 + -0.4
47,734 - -1.8
47,848 - +1.7
47,867 + +2.1
47,868 - -1.3
47,928 - -0.3
48,002 + +0.7
48,009 + +0.5
48,011 + +0.9
48,011 + -1.6
48,012 - -0.2
48,302 + BACOVA_01386 0.18 +0.7
48,302 + BACOVA_01386 0.18 +0.1
48,303 - BACOVA_01386 0.18 -0.1
48,303 - BACOVA_01386 0.18 +1.0
48,410 - BACOVA_01386 0.21 -0.3
48,417 + BACOVA_01386 0.21 -1.8
48,418 - BACOVA_01386 0.21 -0.3
48,418 - BACOVA_01386 0.21 -1.5
48,419 + BACOVA_01386 0.21 -1.5
48,419 + BACOVA_01386 0.21 +0.3
48,556 - BACOVA_01386 0.26 +0.3
48,584 - BACOVA_01386 0.27 +1.0
48,645 + BACOVA_01386 0.28 -0.5
48,645 + BACOVA_01386 0.28 -0.5
48,657 - BACOVA_01386 0.29 -1.5

Or see this region's nucleotide sequence