Experiment: NAG 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_01644 and BACOVA_01645 are separated by 139 nucleotides BACOVA_01645 and BACOVA_01646 are separated by 165 nucleotides BACOVA_01646 and BACOVA_00107 are separated by 283 nucleotides BACOVA_00107 and BACOVA_00108 are separated by 73 nucleotides BACOVA_00108 and BACOVA_00109 are separated by 3 nucleotides
BACOVA_01644: BACOVA_01644 - histidine triad domain protein, at 154,692 to 155,084
_01644
BACOVA_01645: BACOVA_01645 - hypothetical protein, at 155,224 to 155,430
_01645
BACOVA_01646: BACOVA_01646 - hypothetical protein, at 155,596 to 155,727
_01646
BACOVA_00107: BACOVA_00107 - hypothetical protein, at 156,011 to 157,042
_00107
BACOVA_00108: BACOVA_00108 - putative membrane protein, at 157,116 to 158,015
_00108
BACOVA_00109: BACOVA_00109 - transporter, major facilitator family protein, at 158,019 to 159,275
_00109
Position (kb) 156
157
158 Strain fitness (log2 ratio) -2
-1
0
1
2 at 155.081 kb on - strand at 155.082 kb on + strand at 155.082 kb on + strand at 155.083 kb on - strand at 155.100 kb on + strand at 157.150 kb on + strand at 157.258 kb on + strand, within BACOVA_00108 at 157.311 kb on - strand, within BACOVA_00108 at 157.311 kb on - strand, within BACOVA_00108 at 157.312 kb on + strand, within BACOVA_00108 at 157.313 kb on - strand, within BACOVA_00108 at 157.313 kb on - strand, within BACOVA_00108 at 157.320 kb on - strand, within BACOVA_00108 at 157.339 kb on - strand, within BACOVA_00108 at 157.410 kb on - strand, within BACOVA_00108 at 157.421 kb on + strand, within BACOVA_00108 at 157.453 kb on + strand, within BACOVA_00108 at 157.510 kb on + strand, within BACOVA_00108 at 157.519 kb on + strand, within BACOVA_00108 at 157.520 kb on - strand, within BACOVA_00108 at 157.520 kb on - strand, within BACOVA_00108 at 157.534 kb on - strand, within BACOVA_00108 at 157.547 kb on + strand, within BACOVA_00108 at 157.594 kb on - strand, within BACOVA_00108 at 157.615 kb on - strand, within BACOVA_00108 at 157.626 kb on - strand, within BACOVA_00108 at 157.674 kb on + strand, within BACOVA_00108 at 157.675 kb on - strand, within BACOVA_00108 at 157.683 kb on - strand, within BACOVA_00108 at 157.716 kb on + strand, within BACOVA_00108 at 157.717 kb on - strand, within BACOVA_00108 at 157.760 kb on - strand, within BACOVA_00108 at 157.777 kb on + strand, within BACOVA_00108 at 157.814 kb on + strand, within BACOVA_00108 at 157.844 kb on + strand, within BACOVA_00108 at 157.933 kb on + strand at 157.949 kb on + strand at 157.950 kb on - strand at 157.953 kb on + strand at 158.026 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NAG 10 mM (C) remove 155,081 - -1.8 155,082 + -1.8 155,082 + -0.0 155,083 - -0.9 155,100 + -2.3 157,150 + -0.6 157,258 + BACOVA_00108 0.16 +1.2 157,311 - BACOVA_00108 0.22 +0.9 157,311 - BACOVA_00108 0.22 +0.8 157,312 + BACOVA_00108 0.22 -0.3 157,313 - BACOVA_00108 0.22 -0.5 157,313 - BACOVA_00108 0.22 +0.5 157,320 - BACOVA_00108 0.23 -0.6 157,339 - BACOVA_00108 0.25 -1.2 157,410 - BACOVA_00108 0.33 +1.1 157,421 + BACOVA_00108 0.34 +0.9 157,453 + BACOVA_00108 0.37 +2.0 157,510 + BACOVA_00108 0.44 -0.5 157,519 + BACOVA_00108 0.45 -1.6 157,520 - BACOVA_00108 0.45 +0.8 157,520 - BACOVA_00108 0.45 +0.3 157,534 - BACOVA_00108 0.46 -0.6 157,547 + BACOVA_00108 0.48 +0.6 157,594 - BACOVA_00108 0.53 +0.9 157,615 - BACOVA_00108 0.55 -0.0 157,626 - BACOVA_00108 0.57 -1.4 157,674 + BACOVA_00108 0.62 +0.5 157,675 - BACOVA_00108 0.62 -1.3 157,683 - BACOVA_00108 0.63 -1.2 157,716 + BACOVA_00108 0.67 -1.8 157,717 - BACOVA_00108 0.67 -0.8 157,760 - BACOVA_00108 0.72 -1.8 157,777 + BACOVA_00108 0.73 +0.5 157,814 + BACOVA_00108 0.78 -0.4 157,844 + BACOVA_00108 0.81 +1.4 157,933 + -0.4 157,949 + -0.2 157,950 - +0.8 157,953 + +1.4 158,026 - -0.4
Or see this region's nucleotide sequence