Experiment: D-Glucosamine Hydrochloride 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_00143 and BACOVA_00144 are separated by 241 nucleotides BACOVA_00144 and BACOVA_00145 overlap by 29 nucleotides BACOVA_00145 and BACOVA_00146 are separated by 102 nucleotides
BACOVA_00143: BACOVA_00143 - hypothetical protein, at 12,248 to 13,489
_00143
BACOVA_00144: BACOVA_00144 - hypothetical protein, at 13,731 to 14,279
_00144
BACOVA_00145: BACOVA_00145 - hypothetical protein, at 14,251 to 14,973
_00145
BACOVA_00146: BACOVA_00146 - hypothetical protein, at 15,076 to 15,711
_00146
Position (kb) 13
14
15 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 12.751 kb on + strand, within BACOVA_00143 at 12.833 kb on + strand, within BACOVA_00143 at 12.839 kb on - strand, within BACOVA_00143 at 12.852 kb on - strand, within BACOVA_00143 at 12.852 kb on - strand, within BACOVA_00143 at 12.866 kb on + strand, within BACOVA_00143 at 12.867 kb on - strand, within BACOVA_00143 at 12.874 kb on - strand, within BACOVA_00143 at 12.926 kb on - strand, within BACOVA_00143 at 12.926 kb on - strand, within BACOVA_00143 at 12.926 kb on - strand, within BACOVA_00143 at 12.930 kb on - strand, within BACOVA_00143 at 13.001 kb on + strand, within BACOVA_00143 at 13.078 kb on + strand, within BACOVA_00143 at 13.137 kb on + strand, within BACOVA_00143 at 13.138 kb on - strand, within BACOVA_00143 at 13.138 kb on - strand, within BACOVA_00143 at 13.187 kb on - strand, within BACOVA_00143 at 13.187 kb on - strand, within BACOVA_00143 at 13.193 kb on + strand, within BACOVA_00143 at 13.193 kb on + strand, within BACOVA_00143 at 13.197 kb on + strand, within BACOVA_00143 at 13.197 kb on + strand, within BACOVA_00143 at 13.198 kb on - strand, within BACOVA_00143 at 13.198 kb on - strand, within BACOVA_00143 at 13.216 kb on + strand, within BACOVA_00143 at 13.266 kb on + strand, within BACOVA_00143 at 13.352 kb on + strand, within BACOVA_00143 at 13.370 kb on + strand at 13.373 kb on - strand at 13.373 kb on - strand at 13.376 kb on + strand at 13.376 kb on + strand at 13.377 kb on - strand at 13.379 kb on + strand at 13.380 kb on - strand at 13.408 kb on + strand at 13.436 kb on + strand at 13.436 kb on + strand at 13.437 kb on - strand at 13.437 kb on - strand at 13.488 kb on - strand at 13.510 kb on + strand at 13.557 kb on + strand at 13.558 kb on - strand at 13.591 kb on - strand at 13.597 kb on + strand at 13.658 kb on + strand at 13.689 kb on + strand at 13.689 kb on + strand at 13.689 kb on + strand at 13.690 kb on - strand at 13.718 kb on + strand at 13.718 kb on + strand at 13.719 kb on - strand at 13.733 kb on - strand at 13.733 kb on - strand at 13.740 kb on - strand at 13.804 kb on + strand, within BACOVA_00144 at 13.804 kb on + strand, within BACOVA_00144 at 13.809 kb on + strand, within BACOVA_00144 at 13.852 kb on + strand, within BACOVA_00144 at 13.853 kb on - strand, within BACOVA_00144 at 13.853 kb on - strand, within BACOVA_00144 at 13.886 kb on + strand, within BACOVA_00144 at 13.886 kb on + strand, within BACOVA_00144 at 13.889 kb on + strand, within BACOVA_00144 at 13.918 kb on + strand, within BACOVA_00144 at 13.922 kb on + strand, within BACOVA_00144 at 13.925 kb on + strand, within BACOVA_00144 at 13.943 kb on - strand, within BACOVA_00144 at 13.943 kb on - strand, within BACOVA_00144 at 13.960 kb on + strand, within BACOVA_00144 at 13.960 kb on + strand, within BACOVA_00144 at 13.961 kb on - strand, within BACOVA_00144 at 13.961 kb on - strand, within BACOVA_00144 at 13.961 kb on - strand, within BACOVA_00144 at 13.964 kb on + strand, within BACOVA_00144 at 13.964 kb on + strand, within BACOVA_00144 at 13.964 kb on + strand, within BACOVA_00144 at 13.965 kb on - strand, within BACOVA_00144 at 13.965 kb on - strand, within BACOVA_00144 at 13.965 kb on - strand, within BACOVA_00144 at 13.983 kb on + strand, within BACOVA_00144 at 13.984 kb on - strand, within BACOVA_00144 at 13.989 kb on - strand, within BACOVA_00144 at 13.991 kb on - strand, within BACOVA_00144 at 13.991 kb on - strand, within BACOVA_00144 at 14.021 kb on + strand, within BACOVA_00144 at 14.031 kb on + strand, within BACOVA_00144 at 14.032 kb on - strand, within BACOVA_00144 at 14.069 kb on - strand, within BACOVA_00144 at 14.094 kb on + strand, within BACOVA_00144 at 14.140 kb on + strand, within BACOVA_00144 at 14.157 kb on + strand, within BACOVA_00144 at 14.158 kb on - strand, within BACOVA_00144 at 14.158 kb on - strand, within BACOVA_00144 at 14.160 kb on + strand, within BACOVA_00144 at 14.170 kb on - strand, within BACOVA_00144 at 14.201 kb on + strand, within BACOVA_00144 at 14.253 kb on - strand at 14.260 kb on - strand at 14.260 kb on - strand at 14.291 kb on - strand at 14.291 kb on - strand at 14.472 kb on + strand, within BACOVA_00145 at 14.473 kb on - strand, within BACOVA_00145 at 14.497 kb on + strand, within BACOVA_00145 at 14.498 kb on - strand, within BACOVA_00145 at 14.599 kb on + strand, within BACOVA_00145 at 14.600 kb on - strand, within BACOVA_00145 at 14.612 kb on + strand, within BACOVA_00145 at 14.612 kb on + strand, within BACOVA_00145 at 14.735 kb on - strand, within BACOVA_00145 at 14.797 kb on - strand, within BACOVA_00145 at 14.801 kb on + strand, within BACOVA_00145 at 14.852 kb on + strand, within BACOVA_00145 at 14.853 kb on - strand, within BACOVA_00145 at 14.853 kb on - strand, within BACOVA_00145 at 14.853 kb on - strand, within BACOVA_00145 at 14.856 kb on + strand, within BACOVA_00145 at 14.856 kb on + strand, within BACOVA_00145 at 14.857 kb on - strand, within BACOVA_00145 at 14.880 kb on - strand, within BACOVA_00145 at 14.880 kb on - strand, within BACOVA_00145 at 14.923 kb on - strand at 14.939 kb on + strand at 14.973 kb on + strand at 14.973 kb on + strand at 15.044 kb on - strand at 15.047 kb on + strand at 15.048 kb on - strand at 15.077 kb on + strand at 15.077 kb on + strand at 15.145 kb on + strand, within BACOVA_00146 at 15.145 kb on + strand, within BACOVA_00146 at 15.146 kb on - strand, within BACOVA_00146 at 15.188 kb on + strand, within BACOVA_00146 at 15.211 kb on - strand, within BACOVA_00146 at 15.234 kb on - strand, within BACOVA_00146 at 15.234 kb on - strand, within BACOVA_00146
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucosamine Hydrochloride 10 mM (C) remove 12,751 + BACOVA_00143 0.40 -0.0 12,833 + BACOVA_00143 0.47 -0.7 12,839 - BACOVA_00143 0.48 +0.3 12,852 - BACOVA_00143 0.49 +0.9 12,852 - BACOVA_00143 0.49 -0.3 12,866 + BACOVA_00143 0.50 +0.3 12,867 - BACOVA_00143 0.50 +2.5 12,874 - BACOVA_00143 0.50 -0.4 12,926 - BACOVA_00143 0.55 -0.4 12,926 - BACOVA_00143 0.55 -0.2 12,926 - BACOVA_00143 0.55 +1.9 12,930 - BACOVA_00143 0.55 +0.6 13,001 + BACOVA_00143 0.61 -2.9 13,078 + BACOVA_00143 0.67 +0.2 13,137 + BACOVA_00143 0.72 -2.0 13,138 - BACOVA_00143 0.72 -0.5 13,138 - BACOVA_00143 0.72 +0.0 13,187 - BACOVA_00143 0.76 +0.2 13,187 - BACOVA_00143 0.76 -0.3 13,193 + BACOVA_00143 0.76 -0.1 13,193 + BACOVA_00143 0.76 +1.6 13,197 + BACOVA_00143 0.76 -1.3 13,197 + BACOVA_00143 0.76 +0.5 13,198 - BACOVA_00143 0.76 -1.1 13,198 - BACOVA_00143 0.76 -0.1 13,216 + BACOVA_00143 0.78 -0.5 13,266 + BACOVA_00143 0.82 -0.5 13,352 + BACOVA_00143 0.89 -0.5 13,370 + -0.9 13,373 - -0.4 13,373 - +0.1 13,376 + +1.9 13,376 + -0.8 13,377 - +0.9 13,379 + +0.5 13,380 - -0.5 13,408 + +0.6 13,436 + +0.4 13,436 + -1.0 13,437 - -0.9 13,437 - -1.3 13,488 - -0.2 13,510 + -0.5 13,557 + +0.5 13,558 - -1.1 13,591 - -0.1 13,597 + +1.0 13,658 + +0.0 13,689 + +2.0 13,689 + +0.1 13,689 + -0.5 13,690 - +0.0 13,718 + -0.5 13,718 + -0.3 13,719 - -0.1 13,733 - +1.0 13,733 - -1.0 13,740 - +0.5 13,804 + BACOVA_00144 0.13 +1.7 13,804 + BACOVA_00144 0.13 +0.7 13,809 + BACOVA_00144 0.14 +0.1 13,852 + BACOVA_00144 0.22 +0.2 13,853 - BACOVA_00144 0.22 +1.1 13,853 - BACOVA_00144 0.22 +0.9 13,886 + BACOVA_00144 0.28 -1.2 13,886 + BACOVA_00144 0.28 -0.2 13,889 + BACOVA_00144 0.29 -0.7 13,918 + BACOVA_00144 0.34 -0.1 13,922 + BACOVA_00144 0.35 +0.6 13,925 + BACOVA_00144 0.35 +1.5 13,943 - BACOVA_00144 0.39 -0.3 13,943 - BACOVA_00144 0.39 -0.0 13,960 + BACOVA_00144 0.42 -1.0 13,960 + BACOVA_00144 0.42 +0.3 13,961 - BACOVA_00144 0.42 +1.5 13,961 - BACOVA_00144 0.42 -0.0 13,961 - BACOVA_00144 0.42 -0.1 13,964 + BACOVA_00144 0.42 -0.3 13,964 + BACOVA_00144 0.42 -0.1 13,964 + BACOVA_00144 0.42 -0.4 13,965 - BACOVA_00144 0.43 -0.2 13,965 - BACOVA_00144 0.43 +1.5 13,965 - BACOVA_00144 0.43 -2.4 13,983 + BACOVA_00144 0.46 -0.8 13,984 - BACOVA_00144 0.46 -1.2 13,989 - BACOVA_00144 0.47 +0.3 13,991 - BACOVA_00144 0.47 +0.6 13,991 - BACOVA_00144 0.47 -0.9 14,021 + BACOVA_00144 0.53 +0.3 14,031 + BACOVA_00144 0.55 +0.5 14,032 - BACOVA_00144 0.55 +1.1 14,069 - BACOVA_00144 0.62 -0.1 14,094 + BACOVA_00144 0.66 -0.1 14,140 + BACOVA_00144 0.74 -0.1 14,157 + BACOVA_00144 0.78 +0.0 14,158 - BACOVA_00144 0.78 +0.2 14,158 - BACOVA_00144 0.78 -0.5 14,160 + BACOVA_00144 0.78 +0.3 14,170 - BACOVA_00144 0.80 +0.5 14,201 + BACOVA_00144 0.86 +0.4 14,253 - +0.7 14,260 - +0.1 14,260 - -0.2 14,291 - -0.9 14,291 - -0.4 14,472 + BACOVA_00145 0.31 +0.1 14,473 - BACOVA_00145 0.31 -0.5 14,497 + BACOVA_00145 0.34 -0.7 14,498 - BACOVA_00145 0.34 -0.5 14,599 + BACOVA_00145 0.48 -0.1 14,600 - BACOVA_00145 0.48 -0.7 14,612 + BACOVA_00145 0.50 -1.4 14,612 + BACOVA_00145 0.50 -0.4 14,735 - BACOVA_00145 0.67 -0.9 14,797 - BACOVA_00145 0.76 +0.1 14,801 + BACOVA_00145 0.76 -0.1 14,852 + BACOVA_00145 0.83 -0.6 14,853 - BACOVA_00145 0.83 +0.1 14,853 - BACOVA_00145 0.83 +0.6 14,853 - BACOVA_00145 0.83 +0.4 14,856 + BACOVA_00145 0.84 -0.2 14,856 + BACOVA_00145 0.84 -0.7 14,857 - BACOVA_00145 0.84 +0.5 14,880 - BACOVA_00145 0.87 -1.1 14,880 - BACOVA_00145 0.87 -1.2 14,923 - -0.3 14,939 + -0.5 14,973 + -0.1 14,973 + +0.5 15,044 - -0.9 15,047 + -1.1 15,048 - +0.5 15,077 + +0.4 15,077 + -2.6 15,145 + BACOVA_00146 0.11 +1.9 15,145 + BACOVA_00146 0.11 -0.9 15,146 - BACOVA_00146 0.11 +0.9 15,188 + BACOVA_00146 0.18 -2.1 15,211 - BACOVA_00146 0.21 -0.4 15,234 - BACOVA_00146 0.25 -0.3 15,234 - BACOVA_00146 0.25 -0.7
Or see this region's nucleotide sequence