Experiment: D-Arabinose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_02791 and BACOVA_02792 are separated by 761 nucleotides BACOVA_02792 and BACOVA_02793 are separated by 123 nucleotides BACOVA_02793 and BACOVA_02794 are separated by 91 nucleotides BACOVA_02794 and BACOVA_02795 are separated by 16 nucleotides
BACOVA_02791: BACOVA_02791 - hypothetical protein, at 245,112 to 246,839
_02791
BACOVA_02792: BACOVA_02792 - hypothetical protein, at 247,601 to 248,062
_02792
BACOVA_02793: BACOVA_02793 - hypothetical protein, at 248,186 to 248,374
_02793
BACOVA_02794: BACOVA_02794 - hypothetical protein, at 248,466 to 248,576
_02794
BACOVA_02795: BACOVA_02795 - glycosyl hydrolase family 2, sugar binding domain protein, at 248,593 to 250,803
_02795
Position (kb) 247
248
249 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 246.855 kb on + strand at 246.855 kb on + strand at 246.855 kb on + strand at 246.856 kb on - strand at 246.856 kb on - strand at 246.856 kb on - strand at 246.860 kb on - strand at 246.933 kb on - strand at 246.933 kb on - strand at 246.958 kb on + strand at 246.958 kb on + strand at 246.976 kb on + strand at 246.989 kb on + strand at 246.999 kb on + strand at 247.000 kb on - strand at 247.000 kb on - strand at 247.045 kb on + strand at 247.045 kb on + strand at 247.055 kb on + strand at 247.068 kb on + strand at 247.069 kb on - strand at 247.069 kb on - strand at 247.069 kb on - strand at 247.071 kb on - strand at 247.071 kb on - strand at 247.102 kb on + strand at 247.122 kb on + strand at 247.123 kb on - strand at 247.141 kb on - strand at 247.151 kb on - strand at 247.154 kb on - strand at 247.174 kb on - strand at 247.190 kb on + strand at 247.204 kb on + strand at 247.205 kb on - strand at 247.212 kb on + strand at 247.212 kb on + strand at 247.213 kb on - strand at 247.213 kb on - strand at 247.213 kb on - strand at 247.213 kb on - strand at 247.233 kb on + strand at 247.233 kb on + strand at 247.276 kb on - strand at 247.323 kb on + strand at 247.351 kb on + strand at 247.370 kb on + strand at 247.371 kb on - strand at 247.376 kb on + strand at 247.397 kb on + strand at 247.439 kb on - strand at 247.439 kb on - strand at 247.449 kb on - strand at 247.452 kb on + strand at 247.452 kb on + strand at 247.517 kb on + strand at 247.517 kb on + strand at 247.538 kb on + strand at 247.651 kb on + strand, within BACOVA_02792 at 247.695 kb on - strand, within BACOVA_02792 at 247.783 kb on + strand, within BACOVA_02792 at 247.785 kb on + strand, within BACOVA_02792 at 247.785 kb on + strand, within BACOVA_02792 at 247.786 kb on - strand, within BACOVA_02792 at 247.828 kb on - strand, within BACOVA_02792 at 247.828 kb on - strand, within BACOVA_02792 at 247.829 kb on + strand, within BACOVA_02792 at 247.830 kb on - strand, within BACOVA_02792 at 247.830 kb on - strand, within BACOVA_02792 at 247.849 kb on + strand, within BACOVA_02792 at 247.855 kb on + strand, within BACOVA_02792 at 247.965 kb on + strand, within BACOVA_02792 at 248.002 kb on + strand, within BACOVA_02792 at 248.005 kb on - strand, within BACOVA_02792 at 248.043 kb on - strand at 248.062 kb on + strand at 248.063 kb on - strand at 248.063 kb on - strand at 248.063 kb on - strand at 248.063 kb on - strand at 248.087 kb on - strand at 248.111 kb on + strand at 248.116 kb on + strand at 248.120 kb on - strand at 248.135 kb on + strand at 248.174 kb on + strand at 248.175 kb on - strand at 248.176 kb on + strand at 248.185 kb on - strand at 248.185 kb on - strand at 248.185 kb on - strand at 248.188 kb on - strand at 248.254 kb on + strand, within BACOVA_02793 at 248.254 kb on + strand, within BACOVA_02793 at 248.255 kb on - strand, within BACOVA_02793 at 248.281 kb on + strand, within BACOVA_02793 at 248.310 kb on + strand, within BACOVA_02793 at 248.312 kb on + strand, within BACOVA_02793 at 248.332 kb on + strand, within BACOVA_02793 at 248.332 kb on + strand, within BACOVA_02793 at 248.333 kb on - strand, within BACOVA_02793 at 248.342 kb on + strand, within BACOVA_02793 at 248.342 kb on + strand, within BACOVA_02793 at 248.342 kb on + strand, within BACOVA_02793 at 248.343 kb on - strand, within BACOVA_02793 at 248.343 kb on - strand, within BACOVA_02793 at 248.343 kb on - strand, within BACOVA_02793 at 248.416 kb on + strand at 248.416 kb on + strand at 248.416 kb on + strand at 248.419 kb on + strand at 248.419 kb on + strand at 248.435 kb on + strand at 248.435 kb on + strand at 248.436 kb on - strand at 248.442 kb on + strand at 248.517 kb on + strand, within BACOVA_02794 at 248.518 kb on - strand, within BACOVA_02794 at 248.528 kb on + strand, within BACOVA_02794 at 248.551 kb on - strand, within BACOVA_02794 at 248.554 kb on + strand, within BACOVA_02794 at 248.555 kb on - strand, within BACOVA_02794 at 248.559 kb on + strand, within BACOVA_02794 at 248.559 kb on + strand, within BACOVA_02794 at 248.560 kb on - strand, within BACOVA_02794 at 248.560 kb on - strand, within BACOVA_02794 at 248.565 kb on - strand, within BACOVA_02794 at 248.613 kb on - strand at 248.634 kb on + strand at 248.634 kb on + strand at 248.703 kb on - strand at 248.703 kb on - strand at 248.703 kb on - strand at 248.709 kb on + strand at 248.709 kb on + strand at 248.709 kb on + strand at 248.709 kb on + strand at 248.709 kb on + strand at 248.710 kb on - strand at 248.710 kb on - strand at 248.710 kb on - strand at 248.710 kb on - strand at 248.710 kb on - strand at 248.817 kb on + strand, within BACOVA_02795 at 248.826 kb on + strand, within BACOVA_02795 at 248.832 kb on + strand, within BACOVA_02795 at 248.842 kb on + strand, within BACOVA_02795 at 249.007 kb on + strand, within BACOVA_02795 at 249.008 kb on - strand, within BACOVA_02795 at 249.008 kb on - strand, within BACOVA_02795 at 249.028 kb on - strand, within BACOVA_02795 at 249.031 kb on + strand, within BACOVA_02795 at 249.044 kb on + strand, within BACOVA_02795 at 249.048 kb on + strand, within BACOVA_02795
Per-strain Table
Position Strand Gene LocusTag Fraction D-Arabinose 10 mM (C) remove 246,855 + +2.2 246,855 + +4.9 246,855 + +2.7 246,856 - +0.2 246,856 - -0.8 246,856 - -2.0 246,860 - -0.7 246,933 - -0.6 246,933 - -0.8 246,958 + -1.2 246,958 + -0.3 246,976 + -1.3 246,989 + -0.7 246,999 + -0.3 247,000 - -1.5 247,000 - +1.4 247,045 + +0.7 247,045 + +0.2 247,055 + -0.1 247,068 + +0.9 247,069 - +1.7 247,069 - -1.4 247,069 - +0.2 247,071 - -0.7 247,071 - -1.2 247,102 + +0.3 247,122 + +0.4 247,123 - -0.4 247,141 - +0.2 247,151 - +0.4 247,154 - -1.2 247,174 - +1.7 247,190 + -0.5 247,204 + +0.3 247,205 - +0.2 247,212 + -1.1 247,212 + +0.7 247,213 - +0.5 247,213 - -0.5 247,213 - +0.1 247,213 - -1.1 247,233 + -0.3 247,233 + +1.3 247,276 - +1.2 247,323 + -0.1 247,351 + -0.2 247,370 + +0.3 247,371 - -0.4 247,376 + +0.7 247,397 + +0.6 247,439 - -2.8 247,439 - +0.2 247,449 - +0.6 247,452 + -1.8 247,452 + -1.1 247,517 + +0.7 247,517 + -0.4 247,538 + +0.1 247,651 + BACOVA_02792 0.11 -1.4 247,695 - BACOVA_02792 0.20 +1.2 247,783 + BACOVA_02792 0.39 -0.5 247,785 + BACOVA_02792 0.40 -1.2 247,785 + BACOVA_02792 0.40 +0.2 247,786 - BACOVA_02792 0.40 -1.9 247,828 - BACOVA_02792 0.49 +1.7 247,828 - BACOVA_02792 0.49 -1.3 247,829 + BACOVA_02792 0.49 -0.5 247,830 - BACOVA_02792 0.50 -2.6 247,830 - BACOVA_02792 0.50 -1.1 247,849 + BACOVA_02792 0.54 -0.2 247,855 + BACOVA_02792 0.55 +0.7 247,965 + BACOVA_02792 0.79 -0.3 248,002 + BACOVA_02792 0.87 +1.2 248,005 - BACOVA_02792 0.87 -1.8 248,043 - +0.2 248,062 + -0.1 248,063 - +0.2 248,063 - -0.5 248,063 - +0.3 248,063 - -0.5 248,087 - +0.2 248,111 + -0.0 248,116 + -0.1 248,120 - +4.2 248,135 + -2.0 248,174 + +1.2 248,175 - +1.2 248,176 + +0.2 248,185 - +2.2 248,185 - +0.6 248,185 - +2.3 248,188 - +2.6 248,254 + BACOVA_02793 0.36 -1.4 248,254 + BACOVA_02793 0.36 -1.2 248,255 - BACOVA_02793 0.37 +1.9 248,281 + BACOVA_02793 0.50 -0.0 248,310 + BACOVA_02793 0.66 -0.4 248,312 + BACOVA_02793 0.67 +0.2 248,332 + BACOVA_02793 0.77 +0.8 248,332 + BACOVA_02793 0.77 +1.2 248,333 - BACOVA_02793 0.78 -1.9 248,342 + BACOVA_02793 0.83 -1.7 248,342 + BACOVA_02793 0.83 -0.6 248,342 + BACOVA_02793 0.83 +0.4 248,343 - BACOVA_02793 0.83 +0.5 248,343 - BACOVA_02793 0.83 +0.4 248,343 - BACOVA_02793 0.83 +1.2 248,416 + -2.1 248,416 + -0.9 248,416 + +0.4 248,419 + -0.6 248,419 + +0.0 248,435 + +1.7 248,435 + -0.8 248,436 - +0.0 248,442 + -1.5 248,517 + BACOVA_02794 0.46 -0.8 248,518 - BACOVA_02794 0.47 +0.2 248,528 + BACOVA_02794 0.56 -0.3 248,551 - BACOVA_02794 0.77 -1.1 248,554 + BACOVA_02794 0.79 +0.3 248,555 - BACOVA_02794 0.80 -1.6 248,559 + BACOVA_02794 0.84 -1.4 248,559 + BACOVA_02794 0.84 -0.4 248,560 - BACOVA_02794 0.85 +1.2 248,560 - BACOVA_02794 0.85 -0.9 248,565 - BACOVA_02794 0.89 -1.6 248,613 - +1.0 248,634 + -1.1 248,634 + -0.3 248,703 - +0.7 248,703 - -0.7 248,703 - -1.8 248,709 + +0.4 248,709 + -1.4 248,709 + -0.2 248,709 + -0.2 248,709 + -0.3 248,710 - -1.2 248,710 - -0.8 248,710 - +0.0 248,710 - -0.1 248,710 - +0.9 248,817 + BACOVA_02795 0.10 +4.6 248,826 + BACOVA_02795 0.11 +0.0 248,832 + BACOVA_02795 0.11 -0.1 248,842 + BACOVA_02795 0.11 +0.2 249,007 + BACOVA_02795 0.19 -0.1 249,008 - BACOVA_02795 0.19 +0.3 249,008 - BACOVA_02795 0.19 -0.1 249,028 - BACOVA_02795 0.20 +1.7 249,031 + BACOVA_02795 0.20 -0.1 249,044 + BACOVA_02795 0.20 -0.2 249,048 + BACOVA_02795 0.21 +1.2
Or see this region's nucleotide sequence