Experiment: D-Arabinose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_01715 and BACOVA_01716 are separated by 87 nucleotides BACOVA_01716 and BACOVA_01717 are separated by 180 nucleotides BACOVA_01717 and BACOVA_01718 are separated by 119 nucleotides
BACOVA_01715: BACOVA_01715 - aldose 1-epimerase, at 140,590 to 141,729
_01715
BACOVA_01716: BACOVA_01716 - hypothetical protein, at 141,817 to 141,924
_01716
BACOVA_01717: BACOVA_01717 - carbohydrate binding domain protein, at 142,105 to 144,087
_01717
BACOVA_01718: BACOVA_01718 - galactokinase, at 144,207 to 145,361
_01718
Position (kb) 142
143
144
145 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 141.126 kb on + strand, within BACOVA_01715 at 141.127 kb on - strand, within BACOVA_01715 at 141.151 kb on - strand, within BACOVA_01715 at 141.161 kb on + strand, within BACOVA_01715 at 141.165 kb on + strand, within BACOVA_01715 at 141.305 kb on + strand, within BACOVA_01715 at 141.305 kb on + strand, within BACOVA_01715 at 141.305 kb on + strand, within BACOVA_01715 at 141.306 kb on - strand, within BACOVA_01715 at 141.423 kb on + strand, within BACOVA_01715 at 141.445 kb on + strand, within BACOVA_01715 at 141.453 kb on + strand, within BACOVA_01715 at 141.454 kb on - strand, within BACOVA_01715 at 141.454 kb on - strand, within BACOVA_01715 at 141.455 kb on + strand, within BACOVA_01715 at 141.455 kb on + strand, within BACOVA_01715 at 141.456 kb on - strand, within BACOVA_01715 at 141.456 kb on - strand, within BACOVA_01715 at 141.484 kb on + strand, within BACOVA_01715 at 141.498 kb on + strand, within BACOVA_01715 at 141.499 kb on - strand, within BACOVA_01715 at 141.532 kb on - strand, within BACOVA_01715 at 141.556 kb on + strand, within BACOVA_01715 at 141.557 kb on - strand, within BACOVA_01715 at 141.557 kb on - strand, within BACOVA_01715 at 141.557 kb on - strand, within BACOVA_01715 at 141.565 kb on - strand, within BACOVA_01715 at 141.580 kb on + strand, within BACOVA_01715 at 141.586 kb on - strand, within BACOVA_01715 at 141.586 kb on - strand, within BACOVA_01715 at 141.588 kb on - strand, within BACOVA_01715 at 141.830 kb on + strand, within BACOVA_01716 at 141.830 kb on + strand, within BACOVA_01716 at 141.839 kb on + strand, within BACOVA_01716 at 141.840 kb on - strand, within BACOVA_01716 at 141.864 kb on - strand, within BACOVA_01716 at 141.864 kb on - strand, within BACOVA_01716 at 141.871 kb on - strand, within BACOVA_01716 at 141.872 kb on + strand, within BACOVA_01716 at 141.906 kb on + strand, within BACOVA_01716 at 141.907 kb on - strand, within BACOVA_01716 at 142.020 kb on + strand at 142.020 kb on + strand at 142.021 kb on - strand at 142.076 kb on + strand at 142.081 kb on - strand at 142.082 kb on + strand at 142.085 kb on - strand at 142.115 kb on - strand at 142.136 kb on + strand at 142.146 kb on + strand at 142.147 kb on - strand at 142.147 kb on - strand at 142.221 kb on + strand at 142.221 kb on + strand at 142.221 kb on + strand at 142.222 kb on - strand at 142.222 kb on - strand at 142.224 kb on + strand at 142.224 kb on + strand at 142.224 kb on + strand at 142.225 kb on - strand at 142.225 kb on - strand at 142.225 kb on - strand at 142.225 kb on - strand at 142.228 kb on + strand at 142.229 kb on - strand at 142.229 kb on - strand at 142.355 kb on + strand, within BACOVA_01717 at 142.356 kb on - strand, within BACOVA_01717 at 142.422 kb on + strand, within BACOVA_01717 at 142.422 kb on + strand, within BACOVA_01717 at 142.423 kb on - strand, within BACOVA_01717 at 142.423 kb on - strand, within BACOVA_01717 at 142.522 kb on - strand, within BACOVA_01717 at 142.551 kb on - strand, within BACOVA_01717 at 142.599 kb on + strand, within BACOVA_01717 at 142.611 kb on + strand, within BACOVA_01717 at 142.653 kb on + strand, within BACOVA_01717 at 142.653 kb on + strand, within BACOVA_01717 at 142.671 kb on - strand, within BACOVA_01717 at 142.737 kb on + strand, within BACOVA_01717 at 142.775 kb on + strand, within BACOVA_01717 at 142.775 kb on + strand, within BACOVA_01717 at 142.776 kb on - strand, within BACOVA_01717 at 142.836 kb on - strand, within BACOVA_01717 at 142.933 kb on - strand, within BACOVA_01717 at 142.967 kb on - strand, within BACOVA_01717 at 142.982 kb on - strand, within BACOVA_01717 at 142.988 kb on - strand, within BACOVA_01717 at 143.056 kb on + strand, within BACOVA_01717 at 143.064 kb on + strand, within BACOVA_01717 at 143.107 kb on + strand, within BACOVA_01717 at 143.108 kb on - strand, within BACOVA_01717 at 143.108 kb on - strand, within BACOVA_01717 at 143.108 kb on - strand, within BACOVA_01717 at 143.158 kb on - strand, within BACOVA_01717 at 143.175 kb on - strand, within BACOVA_01717 at 143.206 kb on - strand, within BACOVA_01717 at 143.251 kb on + strand, within BACOVA_01717 at 143.307 kb on + strand, within BACOVA_01717 at 143.308 kb on - strand, within BACOVA_01717 at 143.312 kb on + strand, within BACOVA_01717 at 143.315 kb on + strand, within BACOVA_01717 at 143.319 kb on + strand, within BACOVA_01717 at 143.458 kb on + strand, within BACOVA_01717 at 143.458 kb on + strand, within BACOVA_01717 at 143.459 kb on - strand, within BACOVA_01717 at 143.467 kb on - strand, within BACOVA_01717 at 143.494 kb on + strand, within BACOVA_01717 at 143.605 kb on + strand, within BACOVA_01717 at 143.605 kb on + strand, within BACOVA_01717 at 143.605 kb on + strand, within BACOVA_01717 at 143.606 kb on - strand, within BACOVA_01717 at 143.606 kb on - strand, within BACOVA_01717 at 143.686 kb on - strand, within BACOVA_01717 at 143.691 kb on + strand, within BACOVA_01717 at 143.695 kb on + strand, within BACOVA_01717 at 143.695 kb on + strand, within BACOVA_01717 at 143.696 kb on - strand, within BACOVA_01717 at 143.699 kb on - strand, within BACOVA_01717 at 143.702 kb on + strand, within BACOVA_01717 at 143.703 kb on - strand, within BACOVA_01717 at 143.853 kb on + strand, within BACOVA_01717 at 143.853 kb on + strand, within BACOVA_01717 at 143.913 kb on - strand at 143.967 kb on + strand at 144.069 kb on + strand at 144.089 kb on + strand at 144.096 kb on - strand at 144.099 kb on + strand at 144.099 kb on + strand at 144.107 kb on - strand at 144.109 kb on + strand at 144.117 kb on + strand at 144.248 kb on - strand at 144.327 kb on - strand, within BACOVA_01718 at 144.342 kb on - strand, within BACOVA_01718 at 144.342 kb on - strand, within BACOVA_01718 at 144.432 kb on + strand, within BACOVA_01718 at 144.432 kb on + strand, within BACOVA_01718 at 144.432 kb on + strand, within BACOVA_01718 at 144.432 kb on + strand, within BACOVA_01718 at 144.432 kb on + strand, within BACOVA_01718 at 144.479 kb on + strand, within BACOVA_01718 at 144.483 kb on + strand, within BACOVA_01718 at 144.484 kb on - strand, within BACOVA_01718 at 144.549 kb on + strand, within BACOVA_01718 at 144.550 kb on - strand, within BACOVA_01718 at 144.553 kb on + strand, within BACOVA_01718 at 144.553 kb on + strand, within BACOVA_01718 at 144.553 kb on + strand, within BACOVA_01718 at 144.566 kb on + strand, within BACOVA_01718 at 144.567 kb on - strand, within BACOVA_01718 at 144.568 kb on + strand, within BACOVA_01718 at 144.569 kb on - strand, within BACOVA_01718 at 144.603 kb on + strand, within BACOVA_01718 at 144.603 kb on + strand, within BACOVA_01718 at 144.603 kb on + strand, within BACOVA_01718 at 144.604 kb on - strand, within BACOVA_01718 at 144.608 kb on + strand, within BACOVA_01718 at 144.617 kb on + strand, within BACOVA_01718 at 144.698 kb on + strand, within BACOVA_01718 at 144.699 kb on - strand, within BACOVA_01718 at 144.699 kb on - strand, within BACOVA_01718 at 144.778 kb on + strand, within BACOVA_01718 at 144.778 kb on + strand, within BACOVA_01718 at 144.779 kb on - strand, within BACOVA_01718 at 144.854 kb on + strand, within BACOVA_01718 at 144.925 kb on - strand, within BACOVA_01718 at 144.996 kb on - strand, within BACOVA_01718 at 144.996 kb on - strand, within BACOVA_01718 at 144.996 kb on - strand, within BACOVA_01718 at 145.077 kb on + strand, within BACOVA_01718
Per-strain Table
Position Strand Gene LocusTag Fraction D-Arabinose 10 mM (C) remove 141,126 + BACOVA_01715 0.47 -0.6 141,127 - BACOVA_01715 0.47 -0.4 141,151 - BACOVA_01715 0.49 +1.1 141,161 + BACOVA_01715 0.50 -2.5 141,165 + BACOVA_01715 0.50 -1.2 141,305 + BACOVA_01715 0.63 +0.8 141,305 + BACOVA_01715 0.63 -2.9 141,305 + BACOVA_01715 0.63 -3.2 141,306 - BACOVA_01715 0.63 +0.8 141,423 + BACOVA_01715 0.73 -2.2 141,445 + BACOVA_01715 0.75 -2.6 141,453 + BACOVA_01715 0.76 -0.8 141,454 - BACOVA_01715 0.76 -1.9 141,454 - BACOVA_01715 0.76 +0.4 141,455 + BACOVA_01715 0.76 -1.9 141,455 + BACOVA_01715 0.76 -2.2 141,456 - BACOVA_01715 0.76 -1.4 141,456 - BACOVA_01715 0.76 -2.4 141,484 + BACOVA_01715 0.78 +2.4 141,498 + BACOVA_01715 0.80 -1.4 141,499 - BACOVA_01715 0.80 +0.8 141,532 - BACOVA_01715 0.83 -0.8 141,556 + BACOVA_01715 0.85 -2.4 141,557 - BACOVA_01715 0.85 -1.5 141,557 - BACOVA_01715 0.85 -2.2 141,557 - BACOVA_01715 0.85 -1.1 141,565 - BACOVA_01715 0.86 -3.5 141,580 + BACOVA_01715 0.87 -0.2 141,586 - BACOVA_01715 0.87 -2.0 141,586 - BACOVA_01715 0.87 -0.4 141,588 - BACOVA_01715 0.88 -0.8 141,830 + BACOVA_01716 0.12 -1.4 141,830 + BACOVA_01716 0.12 +0.0 141,839 + BACOVA_01716 0.20 +0.2 141,840 - BACOVA_01716 0.21 +1.4 141,864 - BACOVA_01716 0.44 +0.6 141,864 - BACOVA_01716 0.44 +1.4 141,871 - BACOVA_01716 0.50 -0.8 141,872 + BACOVA_01716 0.51 -0.4 141,906 + BACOVA_01716 0.82 -1.4 141,907 - BACOVA_01716 0.83 +1.4 142,020 + -0.8 142,020 + -0.4 142,021 - -0.6 142,076 + -0.2 142,081 - -1.2 142,082 + +1.4 142,085 - -1.2 142,115 - -2.0 142,136 + +0.3 142,146 + +0.4 142,147 - -1.8 142,147 - -0.6 142,221 + -1.1 142,221 + +1.0 142,221 + -1.6 142,222 - -1.0 142,222 - -0.5 142,224 + +0.1 142,224 + -1.5 142,224 + +1.1 142,225 - +1.8 142,225 - -1.2 142,225 - -0.2 142,225 - -0.6 142,228 + +0.4 142,229 - -0.0 142,229 - -2.0 142,355 + BACOVA_01717 0.13 +0.4 142,356 - BACOVA_01717 0.13 +0.4 142,422 + BACOVA_01717 0.16 -0.6 142,422 + BACOVA_01717 0.16 +0.7 142,423 - BACOVA_01717 0.16 -0.6 142,423 - BACOVA_01717 0.16 +1.6 142,522 - BACOVA_01717 0.21 -1.4 142,551 - BACOVA_01717 0.22 -0.2 142,599 + BACOVA_01717 0.25 -0.4 142,611 + BACOVA_01717 0.26 +0.4 142,653 + BACOVA_01717 0.28 -0.9 142,653 + BACOVA_01717 0.28 -1.2 142,671 - BACOVA_01717 0.29 +1.4 142,737 + BACOVA_01717 0.32 -0.8 142,775 + BACOVA_01717 0.34 +0.1 142,775 + BACOVA_01717 0.34 -0.7 142,776 - BACOVA_01717 0.34 +1.4 142,836 - BACOVA_01717 0.37 -0.2 142,933 - BACOVA_01717 0.42 -2.5 142,967 - BACOVA_01717 0.43 +0.4 142,982 - BACOVA_01717 0.44 +0.1 142,988 - BACOVA_01717 0.45 +0.2 143,056 + BACOVA_01717 0.48 -1.0 143,064 + BACOVA_01717 0.48 +0.4 143,107 + BACOVA_01717 0.51 -0.2 143,108 - BACOVA_01717 0.51 +2.0 143,108 - BACOVA_01717 0.51 +0.1 143,108 - BACOVA_01717 0.51 +0.2 143,158 - BACOVA_01717 0.53 -0.8 143,175 - BACOVA_01717 0.54 -1.2 143,206 - BACOVA_01717 0.56 +1.4 143,251 + BACOVA_01717 0.58 +0.4 143,307 + BACOVA_01717 0.61 -1.4 143,308 - BACOVA_01717 0.61 +0.4 143,312 + BACOVA_01717 0.61 -0.3 143,315 + BACOVA_01717 0.61 -0.4 143,319 + BACOVA_01717 0.61 -1.6 143,458 + BACOVA_01717 0.68 -0.3 143,458 + BACOVA_01717 0.68 +0.0 143,459 - BACOVA_01717 0.68 -1.0 143,467 - BACOVA_01717 0.69 +0.1 143,494 + BACOVA_01717 0.70 -1.9 143,605 + BACOVA_01717 0.76 +0.1 143,605 + BACOVA_01717 0.76 +0.2 143,605 + BACOVA_01717 0.76 -1.3 143,606 - BACOVA_01717 0.76 +1.7 143,606 - BACOVA_01717 0.76 -0.2 143,686 - BACOVA_01717 0.80 -0.4 143,691 + BACOVA_01717 0.80 -2.7 143,695 + BACOVA_01717 0.80 +1.4 143,695 + BACOVA_01717 0.80 -2.0 143,696 - BACOVA_01717 0.80 +1.2 143,699 - BACOVA_01717 0.80 +0.4 143,702 + BACOVA_01717 0.81 +0.8 143,703 - BACOVA_01717 0.81 +4.1 143,853 + BACOVA_01717 0.88 -1.2 143,853 + BACOVA_01717 0.88 +1.4 143,913 - +1.4 143,967 + -0.8 144,069 + -1.8 144,089 + -0.2 144,096 - -1.0 144,099 + +0.6 144,099 + -0.2 144,107 - -0.2 144,109 + -0.2 144,117 + +1.7 144,248 - -0.9 144,327 - BACOVA_01718 0.10 -0.4 144,342 - BACOVA_01718 0.12 -1.2 144,342 - BACOVA_01718 0.12 +0.1 144,432 + BACOVA_01718 0.19 -0.3 144,432 + BACOVA_01718 0.19 -0.6 144,432 + BACOVA_01718 0.19 -0.3 144,432 + BACOVA_01718 0.19 +0.4 144,432 + BACOVA_01718 0.19 -0.5 144,479 + BACOVA_01718 0.24 -1.8 144,483 + BACOVA_01718 0.24 -1.4 144,484 - BACOVA_01718 0.24 -1.7 144,549 + BACOVA_01718 0.30 -2.4 144,550 - BACOVA_01718 0.30 +2.8 144,553 + BACOVA_01718 0.30 +0.1 144,553 + BACOVA_01718 0.30 +0.4 144,553 + BACOVA_01718 0.30 -0.6 144,566 + BACOVA_01718 0.31 -1.6 144,567 - BACOVA_01718 0.31 -0.6 144,568 + BACOVA_01718 0.31 +0.4 144,569 - BACOVA_01718 0.31 +0.8 144,603 + BACOVA_01718 0.34 -1.0 144,603 + BACOVA_01718 0.34 -0.6 144,603 + BACOVA_01718 0.34 +2.4 144,604 - BACOVA_01718 0.34 -0.4 144,608 + BACOVA_01718 0.35 -0.9 144,617 + BACOVA_01718 0.35 -0.4 144,698 + BACOVA_01718 0.43 +0.1 144,699 - BACOVA_01718 0.43 +1.4 144,699 - BACOVA_01718 0.43 +0.4 144,778 + BACOVA_01718 0.49 -0.8 144,778 + BACOVA_01718 0.49 -0.5 144,779 - BACOVA_01718 0.50 +0.2 144,854 + BACOVA_01718 0.56 +0.6 144,925 - BACOVA_01718 0.62 -0.5 144,996 - BACOVA_01718 0.68 +0.4 144,996 - BACOVA_01718 0.68 -0.6 144,996 - BACOVA_01718 0.68 +0.8 145,077 + BACOVA_01718 0.75 -0.6
Or see this region's nucleotide sequence