Experiment: D-Arabinose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_01165 and BACOVA_01166 are separated by 157 nucleotides BACOVA_01166 and BACOVA_01167 overlap by 4 nucleotides BACOVA_01167 and BACOVA_01169 are separated by 23 nucleotides BACOVA_01169 and BACOVA_01168 overlap by 26 nucleotides BACOVA_01168 and BACOVA_01170 are separated by 178 nucleotides
BACOVA_01165: BACOVA_01165 - single-stranded-DNA-specific exonuclease RecJ, at 120,885 to 122,651
_01165
BACOVA_01166: BACOVA_01166 - hypothetical protein, at 122,809 to 123,039
_01166
BACOVA_01167: BACOVA_01167 - hypothetical protein, at 123,036 to 123,491
_01167
BACOVA_01169: BACOVA_01169 - hypothetical protein, at 123,515 to 123,739
_01169
BACOVA_01168: BACOVA_01168 - hypothetical protein, at 123,714 to 123,821
_01168
BACOVA_01170: BACOVA_01170 - hypothetical protein, at 124,000 to 124,860
_01170
Position (kb)
123
124 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 122.609 kb on - strand at 122.728 kb on + strand at 122.746 kb on + strand at 122.774 kb on + strand at 122.814 kb on + strand at 122.815 kb on - strand at 122.876 kb on + strand, within BACOVA_01166 at 122.877 kb on - strand, within BACOVA_01166 at 122.877 kb on - strand, within BACOVA_01166 at 122.925 kb on - strand, within BACOVA_01166 at 122.927 kb on + strand, within BACOVA_01166 at 122.953 kb on - strand, within BACOVA_01166 at 122.953 kb on - strand, within BACOVA_01166 at 122.954 kb on + strand, within BACOVA_01166 at 122.954 kb on + strand, within BACOVA_01166 at 122.955 kb on - strand, within BACOVA_01166 at 122.955 kb on - strand, within BACOVA_01166 at 122.974 kb on + strand, within BACOVA_01166 at 122.975 kb on - strand, within BACOVA_01166 at 122.975 kb on - strand, within BACOVA_01166 at 122.981 kb on - strand, within BACOVA_01166 at 122.981 kb on - strand, within BACOVA_01166 at 123.009 kb on + strand, within BACOVA_01166 at 123.009 kb on + strand, within BACOVA_01166 at 123.009 kb on + strand, within BACOVA_01166 at 123.010 kb on - strand, within BACOVA_01166 at 123.024 kb on + strand at 123.052 kb on + strand at 123.082 kb on + strand, within BACOVA_01167 at 123.082 kb on + strand, within BACOVA_01167 at 123.082 kb on + strand, within BACOVA_01167 at 123.087 kb on + strand, within BACOVA_01167 at 123.087 kb on + strand, within BACOVA_01167 at 123.088 kb on - strand, within BACOVA_01167 at 123.088 kb on - strand, within BACOVA_01167 at 123.112 kb on - strand, within BACOVA_01167 at 123.112 kb on - strand, within BACOVA_01167 at 123.154 kb on + strand, within BACOVA_01167 at 123.169 kb on + strand, within BACOVA_01167 at 123.169 kb on + strand, within BACOVA_01167 at 123.192 kb on - strand, within BACOVA_01167 at 123.204 kb on + strand, within BACOVA_01167 at 123.205 kb on - strand, within BACOVA_01167 at 123.207 kb on - strand, within BACOVA_01167 at 123.207 kb on - strand, within BACOVA_01167 at 123.212 kb on - strand, within BACOVA_01167 at 123.212 kb on - strand, within BACOVA_01167 at 123.253 kb on - strand, within BACOVA_01167 at 123.281 kb on - strand, within BACOVA_01167 at 123.281 kb on - strand, within BACOVA_01167 at 123.319 kb on - strand, within BACOVA_01167 at 123.322 kb on - strand, within BACOVA_01167 at 123.468 kb on + strand at 123.505 kb on + strand at 123.505 kb on + strand at 123.508 kb on - strand at 123.508 kb on - strand at 123.516 kb on + strand at 123.536 kb on - strand at 123.563 kb on - strand, within BACOVA_01169 at 123.669 kb on + strand, within BACOVA_01169 at 123.698 kb on + strand, within BACOVA_01169 at 123.699 kb on - strand, within BACOVA_01169 at 123.703 kb on + strand, within BACOVA_01169 at 123.760 kb on + strand, within BACOVA_01168 at 123.761 kb on - strand, within BACOVA_01168 at 123.808 kb on + strand, within BACOVA_01168 at 123.819 kb on + strand at 123.857 kb on - strand at 123.873 kb on + strand at 123.889 kb on - strand at 123.892 kb on - strand at 123.905 kb on - strand at 123.930 kb on + strand at 123.931 kb on - strand at 123.961 kb on - strand at 123.996 kb on - strand at 124.000 kb on - strand at 124.000 kb on - strand at 124.027 kb on - strand at 124.044 kb on + strand at 124.045 kb on - strand at 124.091 kb on + strand, within BACOVA_01170 at 124.091 kb on + strand, within BACOVA_01170 at 124.135 kb on + strand, within BACOVA_01170 at 124.137 kb on + strand, within BACOVA_01170 at 124.137 kb on + strand, within BACOVA_01170 at 124.137 kb on + strand, within BACOVA_01170 at 124.137 kb on + strand, within BACOVA_01170 at 124.142 kb on - strand, within BACOVA_01170 at 124.142 kb on - strand, within BACOVA_01170 at 124.142 kb on - strand, within BACOVA_01170 at 124.142 kb on - strand, within BACOVA_01170 at 124.142 kb on - strand, within BACOVA_01170 at 124.142 kb on - strand, within BACOVA_01170 at 124.183 kb on - strand, within BACOVA_01170 at 124.191 kb on - strand, within BACOVA_01170 at 124.274 kb on - strand, within BACOVA_01170 at 124.275 kb on + strand, within BACOVA_01170 at 124.282 kb on - strand, within BACOVA_01170 at 124.303 kb on + strand, within BACOVA_01170 at 124.304 kb on - strand, within BACOVA_01170 at 124.410 kb on + strand, within BACOVA_01170 at 124.457 kb on + strand, within BACOVA_01170 at 124.458 kb on - strand, within BACOVA_01170 at 124.470 kb on + strand, within BACOVA_01170 at 124.485 kb on + strand, within BACOVA_01170 at 124.490 kb on + strand, within BACOVA_01170
Per-strain Table
Position Strand Gene LocusTag Fraction D-Arabinose 10 mM (C) remove 122,609 - +0.3 122,728 + -0.3 122,746 + -0.2 122,774 + +1.5 122,814 + +0.3 122,815 - +0.7 122,876 + BACOVA_01166 0.29 +0.3 122,877 - BACOVA_01166 0.29 -1.2 122,877 - BACOVA_01166 0.29 -1.0 122,925 - BACOVA_01166 0.50 -1.5 122,927 + BACOVA_01166 0.51 -1.6 122,953 - BACOVA_01166 0.62 -0.7 122,953 - BACOVA_01166 0.62 -0.5 122,954 + BACOVA_01166 0.63 -1.0 122,954 + BACOVA_01166 0.63 +0.7 122,955 - BACOVA_01166 0.63 +0.6 122,955 - BACOVA_01166 0.63 -2.1 122,974 + BACOVA_01166 0.71 -1.7 122,975 - BACOVA_01166 0.72 -0.5 122,975 - BACOVA_01166 0.72 -1.0 122,981 - BACOVA_01166 0.74 -1.2 122,981 - BACOVA_01166 0.74 -0.7 123,009 + BACOVA_01166 0.87 +1.1 123,009 + BACOVA_01166 0.87 -1.9 123,009 + BACOVA_01166 0.87 -0.1 123,010 - BACOVA_01166 0.87 -0.3 123,024 + +0.7 123,052 + +0.7 123,082 + BACOVA_01167 0.10 -0.9 123,082 + BACOVA_01167 0.10 -0.4 123,082 + BACOVA_01167 0.10 +0.6 123,087 + BACOVA_01167 0.11 -0.1 123,087 + BACOVA_01167 0.11 -0.3 123,088 - BACOVA_01167 0.11 -0.7 123,088 - BACOVA_01167 0.11 -0.6 123,112 - BACOVA_01167 0.17 -0.1 123,112 - BACOVA_01167 0.17 -0.2 123,154 + BACOVA_01167 0.26 -0.4 123,169 + BACOVA_01167 0.29 -0.3 123,169 + BACOVA_01167 0.29 -0.3 123,192 - BACOVA_01167 0.34 -1.0 123,204 + BACOVA_01167 0.37 -0.3 123,205 - BACOVA_01167 0.37 +0.3 123,207 - BACOVA_01167 0.38 +0.8 123,207 - BACOVA_01167 0.38 +0.7 123,212 - BACOVA_01167 0.39 -2.2 123,212 - BACOVA_01167 0.39 -0.7 123,253 - BACOVA_01167 0.48 +0.0 123,281 - BACOVA_01167 0.54 -1.7 123,281 - BACOVA_01167 0.54 -0.6 123,319 - BACOVA_01167 0.62 -0.1 123,322 - BACOVA_01167 0.63 -0.7 123,468 + -0.9 123,505 + +0.1 123,505 + +1.2 123,508 - +1.3 123,508 - -0.5 123,516 + -0.7 123,536 - -0.1 123,563 - BACOVA_01169 0.21 -0.0 123,669 + BACOVA_01169 0.68 -0.7 123,698 + BACOVA_01169 0.81 +0.2 123,699 - BACOVA_01169 0.82 -0.6 123,703 + BACOVA_01169 0.84 +0.7 123,760 + BACOVA_01168 0.43 +1.9 123,761 - BACOVA_01168 0.44 -0.3 123,808 + BACOVA_01168 0.87 -1.3 123,819 + -0.8 123,857 - +1.3 123,873 + -1.2 123,889 - -0.8 123,892 - -0.3 123,905 - -0.1 123,930 + -0.7 123,931 - -0.5 123,961 - -2.4 123,996 - +1.3 124,000 - +0.1 124,000 - -0.8 124,027 - +0.3 124,044 + +1.1 124,045 - +0.1 124,091 + BACOVA_01170 0.11 +0.7 124,091 + BACOVA_01170 0.11 -1.3 124,135 + BACOVA_01170 0.16 -0.0 124,137 + BACOVA_01170 0.16 +2.1 124,137 + BACOVA_01170 0.16 -2.1 124,137 + BACOVA_01170 0.16 +0.1 124,137 + BACOVA_01170 0.16 -0.6 124,142 - BACOVA_01170 0.16 +0.7 124,142 - BACOVA_01170 0.16 -2.3 124,142 - BACOVA_01170 0.16 +5.3 124,142 - BACOVA_01170 0.16 +1.7 124,142 - BACOVA_01170 0.16 -0.1 124,142 - BACOVA_01170 0.16 -2.8 124,183 - BACOVA_01170 0.21 +0.2 124,191 - BACOVA_01170 0.22 -1.1 124,274 - BACOVA_01170 0.32 -2.1 124,275 + BACOVA_01170 0.32 +0.1 124,282 - BACOVA_01170 0.33 +0.1 124,303 + BACOVA_01170 0.35 -0.1 124,304 - BACOVA_01170 0.35 -1.8 124,410 + BACOVA_01170 0.48 +0.1 124,457 + BACOVA_01170 0.53 -1.0 124,458 - BACOVA_01170 0.53 -1.7 124,470 + BACOVA_01170 0.55 +1.7 124,485 + BACOVA_01170 0.56 -2.5 124,490 + BACOVA_01170 0.57 -0.3
Or see this region's nucleotide sequence