Experiment: D-Arabinose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_01163 and BACOVA_01164 are separated by 38 nucleotides BACOVA_01164 and BACOVA_01165 overlap by 8 nucleotides
BACOVA_01163: BACOVA_01163 - tetratricopeptide repeat protein, at 117,981 to 118,943
_01163
BACOVA_01164: BACOVA_01164 - ATP-dependent DNA helicase, RecQ family, at 118,982 to 120,892
_01164
BACOVA_01165: BACOVA_01165 - single-stranded-DNA-specific exonuclease RecJ, at 120,885 to 122,651
_01165
Position (kb)
118
119
120
121 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 117.982 kb on + strand at 117.983 kb on - strand at 118.141 kb on + strand, within BACOVA_01163 at 118.220 kb on + strand, within BACOVA_01163 at 118.222 kb on + strand, within BACOVA_01163 at 118.238 kb on - strand, within BACOVA_01163 at 118.238 kb on - strand, within BACOVA_01163 at 118.238 kb on - strand, within BACOVA_01163 at 118.238 kb on - strand, within BACOVA_01163 at 118.243 kb on + strand, within BACOVA_01163 at 118.386 kb on + strand, within BACOVA_01163 at 118.386 kb on + strand, within BACOVA_01163 at 118.386 kb on + strand, within BACOVA_01163 at 118.387 kb on - strand, within BACOVA_01163 at 118.387 kb on - strand, within BACOVA_01163 at 118.389 kb on - strand, within BACOVA_01163 at 118.400 kb on + strand, within BACOVA_01163 at 118.406 kb on + strand, within BACOVA_01163 at 118.406 kb on + strand, within BACOVA_01163 at 118.407 kb on - strand, within BACOVA_01163 at 118.409 kb on - strand, within BACOVA_01163 at 118.409 kb on - strand, within BACOVA_01163 at 118.443 kb on + strand, within BACOVA_01163 at 118.547 kb on - strand, within BACOVA_01163 at 118.604 kb on + strand, within BACOVA_01163 at 118.605 kb on - strand, within BACOVA_01163 at 118.632 kb on + strand, within BACOVA_01163 at 118.632 kb on + strand, within BACOVA_01163 at 118.633 kb on - strand, within BACOVA_01163 at 118.677 kb on - strand, within BACOVA_01163 at 118.732 kb on + strand, within BACOVA_01163 at 118.732 kb on + strand, within BACOVA_01163 at 118.733 kb on - strand, within BACOVA_01163 at 118.733 kb on - strand, within BACOVA_01163 at 118.801 kb on - strand, within BACOVA_01163 at 118.808 kb on - strand, within BACOVA_01163 at 118.847 kb on - strand at 118.963 kb on - strand at 118.978 kb on + strand at 118.978 kb on + strand at 118.994 kb on - strand at 118.998 kb on - strand at 118.998 kb on - strand at 119.037 kb on - strand at 119.041 kb on - strand at 119.079 kb on - strand at 119.079 kb on - strand at 119.091 kb on - strand at 120.883 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Arabinose 10 mM (C) remove 117,982 + -0.6 117,983 - +0.2 118,141 + BACOVA_01163 0.17 +0.3 118,220 + BACOVA_01163 0.25 +1.1 118,222 + BACOVA_01163 0.25 -2.6 118,238 - BACOVA_01163 0.27 -1.0 118,238 - BACOVA_01163 0.27 +0.1 118,238 - BACOVA_01163 0.27 +0.3 118,238 - BACOVA_01163 0.27 +0.4 118,243 + BACOVA_01163 0.27 +0.3 118,386 + BACOVA_01163 0.42 -0.5 118,386 + BACOVA_01163 0.42 +0.1 118,386 + BACOVA_01163 0.42 +0.2 118,387 - BACOVA_01163 0.42 +0.9 118,387 - BACOVA_01163 0.42 -0.1 118,389 - BACOVA_01163 0.42 +0.1 118,400 + BACOVA_01163 0.44 -0.7 118,406 + BACOVA_01163 0.44 +0.1 118,406 + BACOVA_01163 0.44 -1.3 118,407 - BACOVA_01163 0.44 -0.9 118,409 - BACOVA_01163 0.44 -1.2 118,409 - BACOVA_01163 0.44 +0.5 118,443 + BACOVA_01163 0.48 -1.1 118,547 - BACOVA_01163 0.59 -1.7 118,604 + BACOVA_01163 0.65 -0.6 118,605 - BACOVA_01163 0.65 -0.7 118,632 + BACOVA_01163 0.68 +2.0 118,632 + BACOVA_01163 0.68 -0.5 118,633 - BACOVA_01163 0.68 -0.7 118,677 - BACOVA_01163 0.72 -0.7 118,732 + BACOVA_01163 0.78 -1.2 118,732 + BACOVA_01163 0.78 -1.9 118,733 - BACOVA_01163 0.78 +1.7 118,733 - BACOVA_01163 0.78 -1.0 118,801 - BACOVA_01163 0.85 +0.9 118,808 - BACOVA_01163 0.86 +0.9 118,847 - -0.9 118,963 - -0.4 118,978 + -0.1 118,978 + -0.3 118,994 - -1.2 118,998 - +0.9 118,998 - +0.2 119,037 - -1.0 119,041 - -1.5 119,079 - +0.7 119,079 - -0.2 119,091 - -2.0 120,883 - +1.7
Or see this region's nucleotide sequence