Experiment: D-Arabinose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_00584 and BACOVA_00585 are separated by 10 nucleotides BACOVA_00585 and BACOVA_00586 overlap by 26 nucleotides
BACOVA_00584: BACOVA_00584 - RyR domain protein, at 18,646 to 19,734
_00584
BACOVA_00585: BACOVA_00585 - RyR domain protein, at 19,745 to 20,050
_00585
BACOVA_00586: BACOVA_00586 - tetratricopeptide repeat protein, at 20,025 to 23,306
_00586
Position (kb) 19
20
21 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 18.870 kb on + strand, within BACOVA_00584 at 18.870 kb on + strand, within BACOVA_00584 at 18.870 kb on + strand, within BACOVA_00584 at 18.912 kb on + strand, within BACOVA_00584 at 18.928 kb on - strand, within BACOVA_00584 at 18.928 kb on - strand, within BACOVA_00584 at 18.996 kb on + strand, within BACOVA_00584 at 19.001 kb on + strand, within BACOVA_00584 at 19.002 kb on - strand, within BACOVA_00584 at 19.057 kb on - strand, within BACOVA_00584 at 19.071 kb on - strand, within BACOVA_00584 at 19.071 kb on - strand, within BACOVA_00584 at 19.113 kb on + strand, within BACOVA_00584 at 19.114 kb on - strand, within BACOVA_00584 at 19.134 kb on + strand, within BACOVA_00584 at 19.135 kb on - strand, within BACOVA_00584 at 19.148 kb on + strand, within BACOVA_00584 at 19.154 kb on - strand, within BACOVA_00584 at 19.167 kb on - strand, within BACOVA_00584 at 19.179 kb on - strand, within BACOVA_00584 at 19.252 kb on - strand, within BACOVA_00584 at 19.326 kb on + strand, within BACOVA_00584 at 19.505 kb on - strand, within BACOVA_00584 at 19.530 kb on + strand, within BACOVA_00584 at 19.542 kb on + strand, within BACOVA_00584 at 19.570 kb on + strand, within BACOVA_00584 at 19.572 kb on + strand, within BACOVA_00584 at 19.573 kb on - strand, within BACOVA_00584 at 19.573 kb on - strand, within BACOVA_00584 at 19.576 kb on - strand, within BACOVA_00584 at 19.674 kb on + strand at 19.687 kb on + strand at 19.738 kb on - strand at 19.739 kb on + strand at 19.739 kb on + strand at 19.740 kb on - strand at 19.740 kb on - strand at 19.766 kb on + strand at 19.820 kb on + strand, within BACOVA_00585 at 19.892 kb on + strand, within BACOVA_00585 at 19.892 kb on + strand, within BACOVA_00585 at 20.049 kb on - strand at 20.076 kb on - strand at 20.076 kb on - strand at 20.122 kb on + strand at 20.122 kb on + strand at 20.136 kb on + strand at 20.186 kb on + strand at 20.303 kb on + strand at 20.339 kb on + strand at 20.397 kb on - strand, within BACOVA_00586 at 20.496 kb on - strand, within BACOVA_00586 at 20.496 kb on - strand, within BACOVA_00586 at 20.496 kb on - strand, within BACOVA_00586 at 20.499 kb on + strand, within BACOVA_00586 at 20.500 kb on - strand, within BACOVA_00586 at 20.500 kb on - strand, within BACOVA_00586 at 20.566 kb on - strand, within BACOVA_00586 at 20.571 kb on + strand, within BACOVA_00586 at 20.611 kb on - strand, within BACOVA_00586 at 20.619 kb on + strand, within BACOVA_00586 at 20.619 kb on + strand, within BACOVA_00586 at 20.619 kb on + strand, within BACOVA_00586 at 20.634 kb on - strand, within BACOVA_00586 at 20.634 kb on - strand, within BACOVA_00586 at 20.635 kb on + strand, within BACOVA_00586 at 20.635 kb on + strand, within BACOVA_00586 at 20.636 kb on - strand, within BACOVA_00586 at 20.640 kb on + strand, within BACOVA_00586 at 20.684 kb on + strand, within BACOVA_00586 at 20.694 kb on - strand, within BACOVA_00586 at 20.736 kb on + strand, within BACOVA_00586 at 20.816 kb on - strand, within BACOVA_00586 at 20.866 kb on + strand, within BACOVA_00586 at 20.867 kb on - strand, within BACOVA_00586 at 20.867 kb on - strand, within BACOVA_00586 at 20.867 kb on - strand, within BACOVA_00586 at 20.931 kb on - strand, within BACOVA_00586 at 20.932 kb on + strand, within BACOVA_00586 at 20.932 kb on + strand, within BACOVA_00586 at 20.932 kb on + strand, within BACOVA_00586 at 20.932 kb on + strand, within BACOVA_00586 at 20.933 kb on - strand, within BACOVA_00586 at 20.933 kb on - strand, within BACOVA_00586 at 20.933 kb on - strand, within BACOVA_00586 at 20.998 kb on - strand, within BACOVA_00586
Per-strain Table
Position Strand Gene LocusTag Fraction D-Arabinose 10 mM (C) remove 18,870 + BACOVA_00584 0.21 -0.5 18,870 + BACOVA_00584 0.21 -0.6 18,870 + BACOVA_00584 0.21 +0.8 18,912 + BACOVA_00584 0.24 -0.6 18,928 - BACOVA_00584 0.26 +0.0 18,928 - BACOVA_00584 0.26 +1.4 18,996 + BACOVA_00584 0.32 -2.3 19,001 + BACOVA_00584 0.33 -2.0 19,002 - BACOVA_00584 0.33 +0.3 19,057 - BACOVA_00584 0.38 -1.0 19,071 - BACOVA_00584 0.39 -0.6 19,071 - BACOVA_00584 0.39 -0.7 19,113 + BACOVA_00584 0.43 -0.2 19,114 - BACOVA_00584 0.43 +0.1 19,134 + BACOVA_00584 0.45 -1.3 19,135 - BACOVA_00584 0.45 +0.3 19,148 + BACOVA_00584 0.46 +0.8 19,154 - BACOVA_00584 0.47 +0.4 19,167 - BACOVA_00584 0.48 -0.6 19,179 - BACOVA_00584 0.49 +0.1 19,252 - BACOVA_00584 0.56 +1.2 19,326 + BACOVA_00584 0.62 -0.4 19,505 - BACOVA_00584 0.79 +1.4 19,530 + BACOVA_00584 0.81 +0.1 19,542 + BACOVA_00584 0.82 -0.4 19,570 + BACOVA_00584 0.85 -1.6 19,572 + BACOVA_00584 0.85 +0.8 19,573 - BACOVA_00584 0.85 -1.4 19,573 - BACOVA_00584 0.85 -1.4 19,576 - BACOVA_00584 0.85 -1.4 19,674 + +0.8 19,687 + +0.6 19,738 - +0.3 19,739 + +1.8 19,739 + -1.5 19,740 - -1.3 19,740 - -0.8 19,766 + -0.3 19,820 + BACOVA_00585 0.25 +0.4 19,892 + BACOVA_00585 0.48 +0.3 19,892 + BACOVA_00585 0.48 +0.4 20,049 - -1.6 20,076 - +0.8 20,076 - -2.2 20,122 + +1.0 20,122 + +1.3 20,136 + -1.3 20,186 + -0.7 20,303 + -0.9 20,339 + +1.8 20,397 - BACOVA_00586 0.11 +0.8 20,496 - BACOVA_00586 0.14 +0.0 20,496 - BACOVA_00586 0.14 -0.7 20,496 - BACOVA_00586 0.14 +0.3 20,499 + BACOVA_00586 0.14 +1.0 20,500 - BACOVA_00586 0.14 -1.0 20,500 - BACOVA_00586 0.14 -0.7 20,566 - BACOVA_00586 0.16 -0.6 20,571 + BACOVA_00586 0.17 +1.8 20,611 - BACOVA_00586 0.18 +0.1 20,619 + BACOVA_00586 0.18 -1.9 20,619 + BACOVA_00586 0.18 -0.3 20,619 + BACOVA_00586 0.18 +0.1 20,634 - BACOVA_00586 0.19 +0.2 20,634 - BACOVA_00586 0.19 +0.0 20,635 + BACOVA_00586 0.19 +1.8 20,635 + BACOVA_00586 0.19 +1.8 20,636 - BACOVA_00586 0.19 +0.4 20,640 + BACOVA_00586 0.19 +1.1 20,684 + BACOVA_00586 0.20 +0.4 20,694 - BACOVA_00586 0.20 +0.1 20,736 + BACOVA_00586 0.22 -0.4 20,816 - BACOVA_00586 0.24 -0.3 20,866 + BACOVA_00586 0.26 +3.4 20,867 - BACOVA_00586 0.26 -0.9 20,867 - BACOVA_00586 0.26 -0.9 20,867 - BACOVA_00586 0.26 +1.4 20,931 - BACOVA_00586 0.28 -0.2 20,932 + BACOVA_00586 0.28 -0.7 20,932 + BACOVA_00586 0.28 -1.0 20,932 + BACOVA_00586 0.28 -0.9 20,932 + BACOVA_00586 0.28 -0.3 20,933 - BACOVA_00586 0.28 -1.2 20,933 - BACOVA_00586 0.28 -0.0 20,933 - BACOVA_00586 0.28 -1.3 20,998 - BACOVA_00586 0.30 +0.5
Or see this region's nucleotide sequence