Experiment: D-Xylose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_03114 and BACOVA_03115 are separated by 88 nucleotides BACOVA_03115 and BACOVA_03116 are separated by 2 nucleotides BACOVA_03116 and BACOVA_03117 are separated by 12 nucleotides BACOVA_03117 and BACOVA_03118 are separated by 218 nucleotides
BACOVA_03114: BACOVA_03114 - putative CDP-diacylglycerol-serine O-phosphatidyltransferase, at 198,096 to 198,725
_03114
BACOVA_03115: BACOVA_03115 - phosphatidylserine decarboxylase, at 198,814 to 199,500
_03115
BACOVA_03116: BACOVA_03116 - hypothetical protein, at 199,503 to 199,649
_03116
BACOVA_03117: BACOVA_03117 - DNA polymerase III, alpha subunit, at 199,662 to 203,468
_03117
BACOVA_03118: BACOVA_03118 - glycosyl hydrolase family 2, sugar binding domain protein, at 203,687 to 206,929
_03118
Position (kb) 199
200
201
202
203
204 Strain fitness (log2 ratio) -2
-1
0
1 at 199.569 kb on - strand, within BACOVA_03116 at 199.569 kb on - strand, within BACOVA_03116 at 199.634 kb on + strand, within BACOVA_03116 at 199.651 kb on + strand at 203.493 kb on + strand at 203.494 kb on - strand at 203.500 kb on + strand at 203.512 kb on + strand at 203.518 kb on + strand at 203.542 kb on + strand at 203.542 kb on + strand at 203.543 kb on - strand at 203.544 kb on + strand at 203.598 kb on + strand at 203.599 kb on - strand at 203.609 kb on + strand at 203.609 kb on + strand at 203.609 kb on + strand at 203.610 kb on - strand at 203.628 kb on - strand at 203.668 kb on - strand at 203.672 kb on + strand at 203.721 kb on - strand at 203.721 kb on - strand at 203.767 kb on + strand at 203.768 kb on - strand at 203.768 kb on - strand at 203.798 kb on + strand at 203.806 kb on + strand at 203.833 kb on + strand at 203.833 kb on + strand at 203.833 kb on + strand at 203.833 kb on + strand at 203.838 kb on - strand at 203.838 kb on - strand at 203.912 kb on + strand at 203.913 kb on - strand at 203.925 kb on + strand at 203.926 kb on - strand at 203.926 kb on - strand at 203.926 kb on - strand at 203.926 kb on - strand at 203.926 kb on - strand at 203.981 kb on + strand at 203.997 kb on - strand at 203.999 kb on + strand at 203.999 kb on + strand at 203.999 kb on + strand at 203.999 kb on + strand at 204.001 kb on + strand at 204.002 kb on - strand at 204.046 kb on - strand, within BACOVA_03118 at 204.046 kb on - strand, within BACOVA_03118 at 204.068 kb on - strand, within BACOVA_03118 at 204.074 kb on - strand, within BACOVA_03118 at 204.130 kb on + strand, within BACOVA_03118 at 204.251 kb on - strand, within BACOVA_03118 at 204.281 kb on + strand, within BACOVA_03118 at 204.315 kb on - strand, within BACOVA_03118 at 204.368 kb on + strand, within BACOVA_03118 at 204.456 kb on + strand, within BACOVA_03118 at 204.457 kb on - strand, within BACOVA_03118 at 204.458 kb on + strand, within BACOVA_03118 at 204.462 kb on - strand, within BACOVA_03118
Per-strain Table
Position Strand Gene LocusTag Fraction D-Xylose 10 mM (C) remove 199,569 - BACOVA_03116 0.45 -0.8 199,569 - BACOVA_03116 0.45 +1.0 199,634 + BACOVA_03116 0.89 -0.3 199,651 + +1.0 203,493 + -1.8 203,494 - +1.0 203,500 + -0.1 203,512 + +0.6 203,518 + +0.8 203,542 + -0.1 203,542 + -2.2 203,543 - -1.0 203,544 + +0.2 203,598 + +0.1 203,599 - -1.2 203,609 + +0.0 203,609 + -0.7 203,609 + -0.5 203,610 - +0.4 203,628 - +0.6 203,668 - +0.4 203,672 + -0.3 203,721 - +0.9 203,721 - -1.0 203,767 + +1.0 203,768 - -0.6 203,768 - +0.5 203,798 + -0.0 203,806 + -1.3 203,833 + +0.0 203,833 + -0.2 203,833 + +0.0 203,833 + -0.8 203,838 - -1.1 203,838 - -0.2 203,912 + +0.6 203,913 - -0.4 203,925 + +0.3 203,926 - -0.1 203,926 - -0.6 203,926 - +0.9 203,926 - -0.9 203,926 - -0.5 203,981 + +0.4 203,997 - -0.4 203,999 + -0.8 203,999 + -1.2 203,999 + -0.6 203,999 + -1.0 204,001 + +0.2 204,002 - +1.5 204,046 - BACOVA_03118 0.11 -1.0 204,046 - BACOVA_03118 0.11 +0.5 204,068 - BACOVA_03118 0.12 -0.4 204,074 - BACOVA_03118 0.12 -0.0 204,130 + BACOVA_03118 0.14 +0.3 204,251 - BACOVA_03118 0.17 +0.0 204,281 + BACOVA_03118 0.18 -0.3 204,315 - BACOVA_03118 0.19 -0.7 204,368 + BACOVA_03118 0.21 -0.6 204,456 + BACOVA_03118 0.24 -2.0 204,457 - BACOVA_03118 0.24 -0.9 204,458 + BACOVA_03118 0.24 -0.3 204,462 - BACOVA_03118 0.24 -1.5
Or see this region's nucleotide sequence