Experiment: D-Galactose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_05424 and BACOVA_05425 are separated by 140 nucleotides BACOVA_05425 and BACOVA_05426 are separated by 2 nucleotides BACOVA_05426 and BACOVA_05427 are separated by 64 nucleotides
BACOVA_05424: BACOVA_05424 - site-specific recombinase, phage integrase family, at 906,226 to 907,494
_05424
BACOVA_05425: BACOVA_05425 - DNA binding domain, excisionase family, at 907,635 to 907,952
_05425
BACOVA_05426: BACOVA_05426 - hypothetical protein, at 907,955 to 908,272
_05426
BACOVA_05427: BACOVA_05427 - hypothetical protein, at 908,337 to 909,167
_05427
Position (kb) 907
908
909 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 906.966 kb on - strand, within BACOVA_05424 at 907.012 kb on - strand, within BACOVA_05424 at 907.188 kb on + strand, within BACOVA_05424 at 907.188 kb on + strand, within BACOVA_05424 at 907.213 kb on - strand, within BACOVA_05424 at 907.236 kb on + strand, within BACOVA_05424 at 907.237 kb on - strand, within BACOVA_05424 at 907.237 kb on - strand, within BACOVA_05424 at 907.327 kb on + strand, within BACOVA_05424 at 907.328 kb on - strand, within BACOVA_05424 at 907.492 kb on + strand at 907.523 kb on - strand at 907.536 kb on + strand at 907.602 kb on - strand at 907.676 kb on - strand, within BACOVA_05425 at 907.736 kb on - strand, within BACOVA_05425 at 907.759 kb on + strand, within BACOVA_05425 at 907.760 kb on - strand, within BACOVA_05425 at 907.769 kb on + strand, within BACOVA_05425 at 907.788 kb on + strand, within BACOVA_05425 at 907.841 kb on + strand, within BACOVA_05425 at 907.841 kb on + strand, within BACOVA_05425 at 907.841 kb on + strand, within BACOVA_05425 at 907.842 kb on - strand, within BACOVA_05425 at 908.042 kb on - strand, within BACOVA_05426 at 908.054 kb on + strand, within BACOVA_05426 at 908.187 kb on + strand, within BACOVA_05426 at 908.200 kb on + strand, within BACOVA_05426 at 908.225 kb on + strand, within BACOVA_05426 at 908.266 kb on + strand at 908.266 kb on + strand at 908.266 kb on + strand at 908.267 kb on - strand at 908.267 kb on - strand at 908.313 kb on + strand at 908.315 kb on + strand at 908.315 kb on + strand at 908.315 kb on + strand at 908.353 kb on + strand at 908.354 kb on - strand at 908.359 kb on - strand at 908.380 kb on + strand at 908.380 kb on + strand at 908.380 kb on + strand at 908.380 kb on + strand at 908.381 kb on - strand at 908.381 kb on - strand at 908.381 kb on - strand at 908.392 kb on - strand at 908.392 kb on - strand at 908.392 kb on - strand at 908.674 kb on - strand, within BACOVA_05427 at 908.674 kb on - strand, within BACOVA_05427 at 908.768 kb on - strand, within BACOVA_05427 at 908.833 kb on + strand, within BACOVA_05427 at 908.887 kb on + strand, within BACOVA_05427 at 908.903 kb on + strand, within BACOVA_05427 at 908.903 kb on + strand, within BACOVA_05427 at 908.903 kb on + strand, within BACOVA_05427 at 908.904 kb on - strand, within BACOVA_05427 at 908.960 kb on + strand, within BACOVA_05427 at 909.066 kb on + strand, within BACOVA_05427 at 909.066 kb on + strand, within BACOVA_05427 at 909.066 kb on + strand, within BACOVA_05427 at 909.113 kb on + strand at 909.244 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose 10 mM (C) remove 906,966 - BACOVA_05424 0.58 +0.3 907,012 - BACOVA_05424 0.62 -0.2 907,188 + BACOVA_05424 0.76 -0.6 907,188 + BACOVA_05424 0.76 +0.3 907,213 - BACOVA_05424 0.78 +0.2 907,236 + BACOVA_05424 0.80 +0.4 907,237 - BACOVA_05424 0.80 +1.4 907,237 - BACOVA_05424 0.80 -0.1 907,327 + BACOVA_05424 0.87 +2.2 907,328 - BACOVA_05424 0.87 -0.9 907,492 + +1.0 907,523 - -0.5 907,536 + +0.3 907,602 - -1.3 907,676 - BACOVA_05425 0.13 -1.9 907,736 - BACOVA_05425 0.32 +0.5 907,759 + BACOVA_05425 0.39 +1.4 907,760 - BACOVA_05425 0.39 +1.6 907,769 + BACOVA_05425 0.42 +0.6 907,788 + BACOVA_05425 0.48 +0.1 907,841 + BACOVA_05425 0.65 +1.1 907,841 + BACOVA_05425 0.65 -0.7 907,841 + BACOVA_05425 0.65 +1.1 907,842 - BACOVA_05425 0.65 +1.1 908,042 - BACOVA_05426 0.27 +0.4 908,054 + BACOVA_05426 0.31 +0.7 908,187 + BACOVA_05426 0.73 +1.5 908,200 + BACOVA_05426 0.77 +2.4 908,225 + BACOVA_05426 0.85 +0.7 908,266 + +1.0 908,266 + -0.2 908,266 + +1.5 908,267 - -0.0 908,267 - -1.5 908,313 + +0.4 908,315 + +1.2 908,315 + +1.4 908,315 + +1.2 908,353 + +0.7 908,354 - -1.4 908,359 - +1.4 908,380 + -1.3 908,380 + -0.4 908,380 + +0.6 908,380 + -1.0 908,381 - +1.1 908,381 - +0.3 908,381 - -1.6 908,392 - +2.8 908,392 - -2.2 908,392 - -1.2 908,674 - BACOVA_05427 0.41 +0.7 908,674 - BACOVA_05427 0.41 -0.9 908,768 - BACOVA_05427 0.52 +0.2 908,833 + BACOVA_05427 0.60 -1.1 908,887 + BACOVA_05427 0.66 +0.2 908,903 + BACOVA_05427 0.68 +0.1 908,903 + BACOVA_05427 0.68 +0.4 908,903 + BACOVA_05427 0.68 +0.4 908,904 - BACOVA_05427 0.68 -0.1 908,960 + BACOVA_05427 0.75 -0.3 909,066 + BACOVA_05427 0.88 -1.1 909,066 + BACOVA_05427 0.88 +1.4 909,066 + BACOVA_05427 0.88 +0.2 909,113 + +1.9 909,244 + +0.6
Or see this region's nucleotide sequence