Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_05199

Experiment: D-Galactose 10 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_05198 and BACOVA_05199 are separated by 43 nucleotidesBACOVA_05199 and BACOVA_05200 are separated by 3 nucleotides BACOVA_05198: BACOVA_05198 - tetratricopeptide repeat protein, at 697,472 to 698,797 _05198 BACOVA_05199: BACOVA_05199 - hypothetical protein, at 698,841 to 699,455 _05199 BACOVA_05200: BACOVA_05200 - CBS domain protein, at 699,459 to 700,715 _05200 Position (kb) 698 699 700Strain fitness (log2 ratio) -1 0 1 2 3 4at 699.468 kb on + strandat 699.468 kb on + strandat 699.471 kb on - strandat 699.471 kb on - strandat 699.579 kb on - strandat 699.597 kb on - strand, within BACOVA_05200at 699.629 kb on + strand, within BACOVA_05200at 699.666 kb on + strand, within BACOVA_05200at 699.666 kb on + strand, within BACOVA_05200at 699.666 kb on + strand, within BACOVA_05200at 699.666 kb on + strand, within BACOVA_05200at 699.667 kb on - strand, within BACOVA_05200at 699.671 kb on + strand, within BACOVA_05200at 699.671 kb on + strand, within BACOVA_05200at 699.672 kb on - strand, within BACOVA_05200at 699.723 kb on - strand, within BACOVA_05200at 699.768 kb on - strand, within BACOVA_05200at 699.770 kb on + strand, within BACOVA_05200at 699.770 kb on + strand, within BACOVA_05200at 699.864 kb on + strand, within BACOVA_05200at 699.865 kb on - strand, within BACOVA_05200at 699.874 kb on + strand, within BACOVA_05200at 699.877 kb on - strand, within BACOVA_05200at 699.881 kb on + strand, within BACOVA_05200at 699.941 kb on + strand, within BACOVA_05200at 700.197 kb on + strand, within BACOVA_05200at 700.198 kb on - strand, within BACOVA_05200at 700.227 kb on + strand, within BACOVA_05200at 700.230 kb on - strand, within BACOVA_05200at 700.320 kb on - strand, within BACOVA_05200at 700.337 kb on + strand, within BACOVA_05200at 700.338 kb on - strand, within BACOVA_05200at 700.386 kb on - strand, within BACOVA_05200at 700.399 kb on + strand, within BACOVA_05200at 700.426 kb on + strand, within BACOVA_05200at 700.436 kb on + strand, within BACOVA_05200

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Galactose 10 mM (C)
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699,468 + +3.2
699,468 + +1.1
699,471 - +2.6
699,471 - +2.7
699,579 - +3.7
699,597 - BACOVA_05200 0.11 +3.8
699,629 + BACOVA_05200 0.14 +3.1
699,666 + BACOVA_05200 0.16 +3.0
699,666 + BACOVA_05200 0.16 +3.0
699,666 + BACOVA_05200 0.16 +2.0
699,666 + BACOVA_05200 0.16 +3.4
699,667 - BACOVA_05200 0.17 -0.2
699,671 + BACOVA_05200 0.17 +3.1
699,671 + BACOVA_05200 0.17 +2.9
699,672 - BACOVA_05200 0.17 +3.4
699,723 - BACOVA_05200 0.21 +4.1
699,768 - BACOVA_05200 0.25 +2.8
699,770 + BACOVA_05200 0.25 +1.5
699,770 + BACOVA_05200 0.25 +3.9
699,864 + BACOVA_05200 0.32 +3.1
699,865 - BACOVA_05200 0.32 +1.4
699,874 + BACOVA_05200 0.33 +2.4
699,877 - BACOVA_05200 0.33 +2.5
699,881 + BACOVA_05200 0.34 +3.3
699,941 + BACOVA_05200 0.38 +3.1
700,197 + BACOVA_05200 0.59 +3.3
700,198 - BACOVA_05200 0.59 +2.3
700,227 + BACOVA_05200 0.61 +1.1
700,230 - BACOVA_05200 0.61 +4.0
700,320 - BACOVA_05200 0.68 +3.3
700,337 + BACOVA_05200 0.70 +3.6
700,338 - BACOVA_05200 0.70 +3.0
700,386 - BACOVA_05200 0.74 +0.5
700,399 + BACOVA_05200 0.75 +2.9
700,426 + BACOVA_05200 0.77 +0.9
700,436 + BACOVA_05200 0.78 +0.5

Or see this region's nucleotide sequence