Experiment: D-Galactose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_04693 and BACOVA_04694 are separated by 88 nucleotides BACOVA_04694 and BACOVA_04695 overlap by 26 nucleotides BACOVA_04695 and BACOVA_04696 are separated by 54 nucleotides
BACOVA_04693: BACOVA_04693 - hypothetical protein, at 60,759 to 61,610
_04693
BACOVA_04694: BACOVA_04694 - hypothetical protein, at 61,699 to 61,854
_04694
BACOVA_04695: BACOVA_04695 - putative plasmid recombination enzyme, at 61,829 to 63,286
_04695
BACOVA_04696: BACOVA_04696 - hypothetical protein, at 63,341 to 64,741
_04696
Position (kb) 61
62
63
64 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 60.868 kb on - strand, within BACOVA_04693 at 60.930 kb on + strand, within BACOVA_04693 at 61.091 kb on - strand, within BACOVA_04693 at 61.091 kb on - strand, within BACOVA_04693 at 61.163 kb on - strand, within BACOVA_04693 at 61.163 kb on - strand, within BACOVA_04693 at 61.228 kb on + strand, within BACOVA_04693 at 61.681 kb on + strand at 61.683 kb on + strand at 61.684 kb on - strand at 61.736 kb on + strand, within BACOVA_04694 at 61.936 kb on + strand at 61.942 kb on + strand at 61.952 kb on + strand at 61.952 kb on + strand at 61.952 kb on + strand at 62.005 kb on - strand, within BACOVA_04695 at 62.005 kb on - strand, within BACOVA_04695 at 62.005 kb on - strand, within BACOVA_04695 at 62.053 kb on - strand, within BACOVA_04695 at 62.206 kb on + strand, within BACOVA_04695 at 62.207 kb on - strand, within BACOVA_04695 at 62.213 kb on - strand, within BACOVA_04695 at 62.256 kb on - strand, within BACOVA_04695 at 62.256 kb on - strand, within BACOVA_04695 at 62.277 kb on - strand, within BACOVA_04695 at 62.437 kb on + strand, within BACOVA_04695 at 62.462 kb on - strand, within BACOVA_04695 at 62.493 kb on + strand, within BACOVA_04695 at 62.650 kb on + strand, within BACOVA_04695 at 62.816 kb on - strand, within BACOVA_04695 at 62.829 kb on + strand, within BACOVA_04695 at 62.830 kb on - strand, within BACOVA_04695 at 62.921 kb on + strand, within BACOVA_04695 at 62.993 kb on + strand, within BACOVA_04695 at 62.996 kb on - strand, within BACOVA_04695 at 63.115 kb on + strand, within BACOVA_04695 at 63.300 kb on + strand at 63.301 kb on - strand at 63.304 kb on - strand at 63.327 kb on - strand at 63.402 kb on + strand at 63.402 kb on + strand at 63.403 kb on - strand at 63.421 kb on + strand at 63.426 kb on + strand at 63.426 kb on + strand at 63.426 kb on + strand at 63.433 kb on + strand at 63.433 kb on + strand at 63.433 kb on + strand at 63.441 kb on - strand at 63.444 kb on - strand at 63.445 kb on + strand at 63.446 kb on - strand at 63.446 kb on - strand at 63.547 kb on + strand, within BACOVA_04696 at 63.611 kb on + strand, within BACOVA_04696 at 63.659 kb on - strand, within BACOVA_04696 at 63.665 kb on + strand, within BACOVA_04696 at 63.710 kb on + strand, within BACOVA_04696 at 63.718 kb on + strand, within BACOVA_04696 at 63.778 kb on - strand, within BACOVA_04696 at 63.778 kb on - strand, within BACOVA_04696 at 63.895 kb on - strand, within BACOVA_04696 at 63.981 kb on + strand, within BACOVA_04696 at 64.052 kb on + strand, within BACOVA_04696 at 64.082 kb on + strand, within BACOVA_04696 at 64.127 kb on + strand, within BACOVA_04696
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose 10 mM (C) remove 60,868 - BACOVA_04693 0.13 -0.4 60,930 + BACOVA_04693 0.20 -1.4 61,091 - BACOVA_04693 0.39 +1.0 61,091 - BACOVA_04693 0.39 -0.4 61,163 - BACOVA_04693 0.47 -0.1 61,163 - BACOVA_04693 0.47 -1.8 61,228 + BACOVA_04693 0.55 +1.8 61,681 + -0.0 61,683 + +0.2 61,684 - -0.7 61,736 + BACOVA_04694 0.24 -1.0 61,936 + +1.2 61,942 + -0.4 61,952 + +1.9 61,952 + -2.3 61,952 + -0.5 62,005 - BACOVA_04695 0.12 +2.5 62,005 - BACOVA_04695 0.12 +0.4 62,005 - BACOVA_04695 0.12 -0.8 62,053 - BACOVA_04695 0.15 +0.5 62,206 + BACOVA_04695 0.26 -2.6 62,207 - BACOVA_04695 0.26 -0.4 62,213 - BACOVA_04695 0.26 +1.3 62,256 - BACOVA_04695 0.29 +0.3 62,256 - BACOVA_04695 0.29 -0.0 62,277 - BACOVA_04695 0.31 +0.5 62,437 + BACOVA_04695 0.42 -3.2 62,462 - BACOVA_04695 0.43 +0.3 62,493 + BACOVA_04695 0.46 -0.0 62,650 + BACOVA_04695 0.56 +0.7 62,816 - BACOVA_04695 0.68 -1.3 62,829 + BACOVA_04695 0.69 -0.0 62,830 - BACOVA_04695 0.69 +1.6 62,921 + BACOVA_04695 0.75 -1.1 62,993 + BACOVA_04695 0.80 -1.8 62,996 - BACOVA_04695 0.80 -0.5 63,115 + BACOVA_04695 0.88 +1.1 63,300 + -0.8 63,301 - +0.2 63,304 - +0.0 63,327 - +0.0 63,402 + -1.3 63,402 + -1.1 63,403 - -0.4 63,421 + +1.3 63,426 + -0.5 63,426 + +3.8 63,426 + +0.2 63,433 + +0.9 63,433 + -0.4 63,433 + +0.3 63,441 - +0.1 63,444 - -0.5 63,445 + +0.7 63,446 - +2.2 63,446 - +0.5 63,547 + BACOVA_04696 0.15 -0.8 63,611 + BACOVA_04696 0.19 +1.2 63,659 - BACOVA_04696 0.23 -0.7 63,665 + BACOVA_04696 0.23 +0.5 63,710 + BACOVA_04696 0.26 +1.7 63,718 + BACOVA_04696 0.27 +0.2 63,778 - BACOVA_04696 0.31 -0.2 63,778 - BACOVA_04696 0.31 -1.0 63,895 - BACOVA_04696 0.40 -1.0 63,981 + BACOVA_04696 0.46 -1.1 64,052 + BACOVA_04696 0.51 -0.8 64,082 + BACOVA_04696 0.53 -0.0 64,127 + BACOVA_04696 0.56 -2.1
Or see this region's nucleotide sequence