Experiment: D-Galactose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_04511 and BACOVA_04512 are separated by 105 nucleotides BACOVA_04512 and BACOVA_04513 overlap by 20 nucleotides BACOVA_04513 and BACOVA_04514 are separated by 191 nucleotides
BACOVA_04511: BACOVA_04511 - hypothetical protein, at 451,149 to 451,676
_04511
BACOVA_04512: BACOVA_04512 - hypothetical protein, at 451,782 to 452,111
_04512
BACOVA_04513: BACOVA_04513 - kelch repeat protein, at 452,092 to 453,150
_04513
BACOVA_04514: BACOVA_04514 - hypothetical protein, at 453,342 to 454,667
_04514
Position (kb) 452
453
454 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 451.098 kb on - strand at 451.156 kb on + strand at 451.156 kb on + strand at 451.296 kb on - strand, within BACOVA_04511 at 451.314 kb on - strand, within BACOVA_04511 at 451.319 kb on + strand, within BACOVA_04511 at 451.319 kb on + strand, within BACOVA_04511 at 451.320 kb on - strand, within BACOVA_04511 at 451.348 kb on - strand, within BACOVA_04511 at 451.353 kb on + strand, within BACOVA_04511 at 451.353 kb on + strand, within BACOVA_04511 at 451.358 kb on + strand, within BACOVA_04511 at 451.360 kb on + strand, within BACOVA_04511 at 451.361 kb on - strand, within BACOVA_04511 at 451.381 kb on + strand, within BACOVA_04511 at 451.381 kb on + strand, within BACOVA_04511 at 451.381 kb on + strand, within BACOVA_04511 at 451.382 kb on - strand, within BACOVA_04511 at 451.394 kb on + strand, within BACOVA_04511 at 451.395 kb on - strand, within BACOVA_04511 at 451.432 kb on + strand, within BACOVA_04511 at 451.432 kb on + strand, within BACOVA_04511 at 451.433 kb on - strand, within BACOVA_04511 at 451.433 kb on - strand, within BACOVA_04511 at 451.439 kb on + strand, within BACOVA_04511 at 451.439 kb on + strand, within BACOVA_04511 at 451.439 kb on + strand, within BACOVA_04511 at 451.440 kb on - strand, within BACOVA_04511 at 451.440 kb on - strand, within BACOVA_04511 at 451.442 kb on + strand, within BACOVA_04511 at 451.443 kb on - strand, within BACOVA_04511 at 451.522 kb on - strand, within BACOVA_04511 at 451.617 kb on + strand, within BACOVA_04511 at 451.642 kb on - strand at 451.642 kb on - strand at 451.645 kb on + strand at 451.685 kb on + strand at 451.685 kb on + strand at 451.693 kb on + strand at 451.709 kb on - strand at 451.751 kb on - strand at 451.772 kb on + strand at 451.772 kb on + strand at 451.773 kb on - strand at 451.787 kb on - strand at 451.821 kb on + strand, within BACOVA_04512 at 451.860 kb on + strand, within BACOVA_04512 at 451.926 kb on - strand, within BACOVA_04512 at 451.942 kb on - strand, within BACOVA_04512 at 451.942 kb on - strand, within BACOVA_04512 at 452.032 kb on + strand, within BACOVA_04512 at 452.033 kb on - strand, within BACOVA_04512 at 452.038 kb on + strand, within BACOVA_04512 at 452.038 kb on + strand, within BACOVA_04512 at 452.039 kb on - strand, within BACOVA_04512 at 452.039 kb on - strand, within BACOVA_04512 at 452.039 kb on - strand, within BACOVA_04512 at 452.076 kb on - strand, within BACOVA_04512 at 452.078 kb on + strand, within BACOVA_04512 at 452.079 kb on - strand at 452.079 kb on - strand at 452.105 kb on + strand at 452.106 kb on - strand at 452.130 kb on + strand at 452.130 kb on + strand at 452.145 kb on - strand at 452.145 kb on - strand at 452.164 kb on - strand at 452.167 kb on + strand at 452.169 kb on + strand at 452.215 kb on - strand, within BACOVA_04513 at 452.270 kb on + strand, within BACOVA_04513 at 452.280 kb on - strand, within BACOVA_04513 at 452.292 kb on - strand, within BACOVA_04513 at 452.292 kb on - strand, within BACOVA_04513 at 452.296 kb on - strand, within BACOVA_04513 at 452.296 kb on - strand, within BACOVA_04513 at 452.358 kb on - strand, within BACOVA_04513 at 452.370 kb on + strand, within BACOVA_04513 at 452.391 kb on - strand, within BACOVA_04513 at 452.406 kb on + strand, within BACOVA_04513 at 452.504 kb on + strand, within BACOVA_04513 at 452.505 kb on - strand, within BACOVA_04513 at 452.505 kb on - strand, within BACOVA_04513 at 452.509 kb on + strand, within BACOVA_04513 at 452.509 kb on + strand, within BACOVA_04513 at 452.509 kb on + strand, within BACOVA_04513 at 452.509 kb on + strand, within BACOVA_04513 at 452.586 kb on + strand, within BACOVA_04513 at 452.586 kb on + strand, within BACOVA_04513 at 452.628 kb on - strand, within BACOVA_04513 at 452.640 kb on - strand, within BACOVA_04513 at 452.640 kb on - strand, within BACOVA_04513 at 452.687 kb on + strand, within BACOVA_04513 at 452.687 kb on + strand, within BACOVA_04513 at 452.687 kb on + strand, within BACOVA_04513 at 452.687 kb on + strand, within BACOVA_04513 at 452.688 kb on - strand, within BACOVA_04513 at 452.688 kb on - strand, within BACOVA_04513 at 452.688 kb on - strand, within BACOVA_04513 at 452.703 kb on - strand, within BACOVA_04513 at 452.703 kb on - strand, within BACOVA_04513 at 452.703 kb on - strand, within BACOVA_04513 at 452.706 kb on + strand, within BACOVA_04513 at 452.706 kb on + strand, within BACOVA_04513 at 452.706 kb on + strand, within BACOVA_04513 at 452.771 kb on + strand, within BACOVA_04513 at 452.826 kb on + strand, within BACOVA_04513 at 452.827 kb on - strand, within BACOVA_04513 at 452.827 kb on - strand, within BACOVA_04513 at 452.828 kb on + strand, within BACOVA_04513 at 452.843 kb on - strand, within BACOVA_04513 at 452.843 kb on - strand, within BACOVA_04513 at 452.843 kb on - strand, within BACOVA_04513 at 452.856 kb on + strand, within BACOVA_04513 at 452.895 kb on + strand, within BACOVA_04513 at 452.896 kb on - strand, within BACOVA_04513 at 452.896 kb on - strand, within BACOVA_04513 at 452.984 kb on + strand, within BACOVA_04513 at 452.985 kb on - strand, within BACOVA_04513 at 452.989 kb on + strand, within BACOVA_04513 at 452.990 kb on - strand, within BACOVA_04513 at 453.069 kb on + strand at 453.072 kb on - strand at 453.075 kb on - strand at 453.087 kb on + strand at 453.087 kb on + strand at 453.133 kb on - strand at 453.150 kb on + strand at 453.154 kb on + strand at 453.155 kb on - strand at 453.155 kb on - strand at 453.167 kb on - strand at 453.230 kb on + strand at 453.230 kb on + strand at 453.231 kb on - strand at 453.231 kb on - strand at 453.235 kb on - strand at 453.293 kb on - strand at 453.339 kb on + strand at 453.355 kb on + strand at 453.355 kb on + strand at 453.356 kb on - strand at 453.356 kb on - strand at 453.376 kb on + strand at 453.400 kb on + strand at 453.419 kb on - strand at 453.464 kb on + strand at 453.465 kb on - strand at 453.465 kb on - strand at 453.471 kb on - strand at 453.478 kb on + strand, within BACOVA_04514 at 453.479 kb on - strand, within BACOVA_04514 at 453.485 kb on + strand, within BACOVA_04514 at 453.490 kb on + strand, within BACOVA_04514 at 453.491 kb on - strand, within BACOVA_04514 at 453.493 kb on + strand, within BACOVA_04514 at 453.535 kb on + strand, within BACOVA_04514 at 453.557 kb on - strand, within BACOVA_04514 at 453.569 kb on + strand, within BACOVA_04514 at 453.592 kb on - strand, within BACOVA_04514 at 453.599 kb on - strand, within BACOVA_04514 at 453.599 kb on - strand, within BACOVA_04514 at 453.599 kb on - strand, within BACOVA_04514 at 453.606 kb on + strand, within BACOVA_04514 at 453.630 kb on + strand, within BACOVA_04514 at 453.652 kb on + strand, within BACOVA_04514 at 453.652 kb on + strand, within BACOVA_04514 at 453.653 kb on - strand, within BACOVA_04514 at 453.661 kb on - strand, within BACOVA_04514 at 453.675 kb on + strand, within BACOVA_04514 at 453.676 kb on - strand, within BACOVA_04514 at 453.692 kb on - strand, within BACOVA_04514 at 453.746 kb on + strand, within BACOVA_04514 at 453.757 kb on + strand, within BACOVA_04514 at 453.757 kb on + strand, within BACOVA_04514 at 453.757 kb on + strand, within BACOVA_04514 at 453.758 kb on - strand, within BACOVA_04514 at 453.758 kb on - strand, within BACOVA_04514 at 453.758 kb on - strand, within BACOVA_04514 at 453.760 kb on - strand, within BACOVA_04514 at 453.767 kb on + strand, within BACOVA_04514 at 453.771 kb on - strand, within BACOVA_04514 at 453.781 kb on - strand, within BACOVA_04514 at 453.939 kb on + strand, within BACOVA_04514 at 453.983 kb on + strand, within BACOVA_04514 at 453.984 kb on - strand, within BACOVA_04514 at 454.029 kb on + strand, within BACOVA_04514
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose 10 mM (C) remove 451,098 - -0.9 451,156 + +2.3 451,156 + +0.8 451,296 - BACOVA_04511 0.28 -0.3 451,314 - BACOVA_04511 0.31 -0.1 451,319 + BACOVA_04511 0.32 +0.6 451,319 + BACOVA_04511 0.32 +1.1 451,320 - BACOVA_04511 0.32 +1.3 451,348 - BACOVA_04511 0.38 +1.3 451,353 + BACOVA_04511 0.39 +0.1 451,353 + BACOVA_04511 0.39 +1.0 451,358 + BACOVA_04511 0.40 -3.1 451,360 + BACOVA_04511 0.40 -0.2 451,361 - BACOVA_04511 0.40 +0.5 451,381 + BACOVA_04511 0.44 -1.2 451,381 + BACOVA_04511 0.44 -0.9 451,381 + BACOVA_04511 0.44 -0.3 451,382 - BACOVA_04511 0.44 -2.1 451,394 + BACOVA_04511 0.46 +0.2 451,395 - BACOVA_04511 0.47 -0.2 451,432 + BACOVA_04511 0.54 +0.1 451,432 + BACOVA_04511 0.54 +0.5 451,433 - BACOVA_04511 0.54 -1.5 451,433 - BACOVA_04511 0.54 -2.1 451,439 + BACOVA_04511 0.55 -0.8 451,439 + BACOVA_04511 0.55 +0.4 451,439 + BACOVA_04511 0.55 -0.2 451,440 - BACOVA_04511 0.55 +0.1 451,440 - BACOVA_04511 0.55 +1.1 451,442 + BACOVA_04511 0.55 +0.3 451,443 - BACOVA_04511 0.56 +0.7 451,522 - BACOVA_04511 0.71 -0.8 451,617 + BACOVA_04511 0.89 +0.6 451,642 - -1.3 451,642 - +1.1 451,645 + -0.5 451,685 + -0.1 451,685 + +0.1 451,693 + -0.0 451,709 - -0.3 451,751 - -1.0 451,772 + +0.1 451,772 + +0.5 451,773 - -0.3 451,787 - -1.3 451,821 + BACOVA_04512 0.12 -0.3 451,860 + BACOVA_04512 0.24 -0.2 451,926 - BACOVA_04512 0.44 +0.7 451,942 - BACOVA_04512 0.48 +1.1 451,942 - BACOVA_04512 0.48 +0.2 452,032 + BACOVA_04512 0.76 -0.3 452,033 - BACOVA_04512 0.76 +1.4 452,038 + BACOVA_04512 0.78 +0.6 452,038 + BACOVA_04512 0.78 -0.5 452,039 - BACOVA_04512 0.78 -0.9 452,039 - BACOVA_04512 0.78 -1.5 452,039 - BACOVA_04512 0.78 -0.5 452,076 - BACOVA_04512 0.89 +1.6 452,078 + BACOVA_04512 0.90 +0.6 452,079 - -0.1 452,079 - -0.3 452,105 + -0.0 452,106 - -0.1 452,130 + +0.2 452,130 + -0.4 452,145 - +1.1 452,145 - +0.2 452,164 - -1.4 452,167 + -0.9 452,169 + +0.1 452,215 - BACOVA_04513 0.12 -0.5 452,270 + BACOVA_04513 0.17 +0.9 452,280 - BACOVA_04513 0.18 -0.4 452,292 - BACOVA_04513 0.19 -0.6 452,292 - BACOVA_04513 0.19 +0.7 452,296 - BACOVA_04513 0.19 -1.1 452,296 - BACOVA_04513 0.19 +2.6 452,358 - BACOVA_04513 0.25 -0.6 452,370 + BACOVA_04513 0.26 -0.3 452,391 - BACOVA_04513 0.28 -0.3 452,406 + BACOVA_04513 0.30 -0.5 452,504 + BACOVA_04513 0.39 -0.5 452,505 - BACOVA_04513 0.39 -0.4 452,505 - BACOVA_04513 0.39 -0.6 452,509 + BACOVA_04513 0.39 +0.5 452,509 + BACOVA_04513 0.39 -0.8 452,509 + BACOVA_04513 0.39 +2.6 452,509 + BACOVA_04513 0.39 -0.3 452,586 + BACOVA_04513 0.47 +2.1 452,586 + BACOVA_04513 0.47 -1.5 452,628 - BACOVA_04513 0.51 +1.1 452,640 - BACOVA_04513 0.52 -0.1 452,640 - BACOVA_04513 0.52 -0.9 452,687 + BACOVA_04513 0.56 +0.7 452,687 + BACOVA_04513 0.56 -1.8 452,687 + BACOVA_04513 0.56 -0.9 452,687 + BACOVA_04513 0.56 +1.6 452,688 - BACOVA_04513 0.56 +0.5 452,688 - BACOVA_04513 0.56 +1.6 452,688 - BACOVA_04513 0.56 -0.8 452,703 - BACOVA_04513 0.58 -0.2 452,703 - BACOVA_04513 0.58 -1.5 452,703 - BACOVA_04513 0.58 -1.1 452,706 + BACOVA_04513 0.58 +0.1 452,706 + BACOVA_04513 0.58 -0.2 452,706 + BACOVA_04513 0.58 -0.3 452,771 + BACOVA_04513 0.64 -0.2 452,826 + BACOVA_04513 0.69 -1.3 452,827 - BACOVA_04513 0.69 -0.0 452,827 - BACOVA_04513 0.69 +0.2 452,828 + BACOVA_04513 0.69 -0.3 452,843 - BACOVA_04513 0.71 -1.6 452,843 - BACOVA_04513 0.71 -0.5 452,843 - BACOVA_04513 0.71 -0.1 452,856 + BACOVA_04513 0.72 -0.5 452,895 + BACOVA_04513 0.76 -2.8 452,896 - BACOVA_04513 0.76 -0.3 452,896 - BACOVA_04513 0.76 -0.2 452,984 + BACOVA_04513 0.84 -1.9 452,985 - BACOVA_04513 0.84 -0.2 452,989 + BACOVA_04513 0.85 +0.1 452,990 - BACOVA_04513 0.85 -0.1 453,069 + -0.0 453,072 - -1.5 453,075 - -0.9 453,087 + +0.7 453,087 + -0.6 453,133 - -0.1 453,150 + -0.9 453,154 + +1.0 453,155 - -1.9 453,155 - -2.3 453,167 - +1.1 453,230 + +2.1 453,230 + +2.2 453,231 - -0.3 453,231 - -2.1 453,235 - -0.9 453,293 - -1.4 453,339 + +1.1 453,355 + -0.5 453,355 + +1.4 453,356 - -2.5 453,356 - -3.6 453,376 + -0.2 453,400 + -0.3 453,419 - +0.5 453,464 + -0.4 453,465 - -1.3 453,465 - +0.2 453,471 - -1.3 453,478 + BACOVA_04514 0.10 -1.9 453,479 - BACOVA_04514 0.10 -2.3 453,485 + BACOVA_04514 0.11 -0.2 453,490 + BACOVA_04514 0.11 -1.1 453,491 - BACOVA_04514 0.11 +0.2 453,493 + BACOVA_04514 0.11 +0.5 453,535 + BACOVA_04514 0.15 +0.9 453,557 - BACOVA_04514 0.16 -0.7 453,569 + BACOVA_04514 0.17 +1.2 453,592 - BACOVA_04514 0.19 +0.5 453,599 - BACOVA_04514 0.19 +2.1 453,599 - BACOVA_04514 0.19 +0.1 453,599 - BACOVA_04514 0.19 +0.6 453,606 + BACOVA_04514 0.20 +1.1 453,630 + BACOVA_04514 0.22 +0.0 453,652 + BACOVA_04514 0.23 -2.9 453,652 + BACOVA_04514 0.23 -0.3 453,653 - BACOVA_04514 0.23 -0.8 453,661 - BACOVA_04514 0.24 -0.5 453,675 + BACOVA_04514 0.25 +1.7 453,676 - BACOVA_04514 0.25 -2.3 453,692 - BACOVA_04514 0.26 -0.5 453,746 + BACOVA_04514 0.30 -0.3 453,757 + BACOVA_04514 0.31 +1.8 453,757 + BACOVA_04514 0.31 -1.3 453,757 + BACOVA_04514 0.31 +0.2 453,758 - BACOVA_04514 0.31 -1.4 453,758 - BACOVA_04514 0.31 -0.3 453,758 - BACOVA_04514 0.31 -2.3 453,760 - BACOVA_04514 0.32 -1.1 453,767 + BACOVA_04514 0.32 +0.6 453,771 - BACOVA_04514 0.32 -0.4 453,781 - BACOVA_04514 0.33 +0.5 453,939 + BACOVA_04514 0.45 -1.5 453,983 + BACOVA_04514 0.48 +0.2 453,984 - BACOVA_04514 0.48 -0.8 454,029 + BACOVA_04514 0.52 -0.0
Or see this region's nucleotide sequence