Experiment: D-Galactose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_04405 and BACOVA_04406 overlap by 4 nucleotides BACOVA_04406 and BACOVA_04407 are separated by 150 nucleotides BACOVA_04407 and BACOVA_04408 are separated by 73 nucleotides
BACOVA_04405: BACOVA_04405 - hypothetical protein, at 318,531 to 320,720
_04405
BACOVA_04406: BACOVA_04406 - hypothetical protein, at 320,717 to 322,924
_04406
BACOVA_04407: BACOVA_04407 - hypothetical protein, at 323,075 to 323,515
_04407
BACOVA_04408: BACOVA_04408 - hypothetical protein, at 323,589 to 323,933
_04408
Position (kb) 320
321
322
323 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 319.732 kb on + strand, within BACOVA_04405 at 319.732 kb on + strand, within BACOVA_04405 at 319.733 kb on - strand, within BACOVA_04405 at 319.733 kb on - strand, within BACOVA_04405 at 319.782 kb on - strand, within BACOVA_04405 at 319.785 kb on - strand, within BACOVA_04405 at 319.901 kb on - strand, within BACOVA_04405 at 319.918 kb on + strand, within BACOVA_04405 at 319.920 kb on + strand, within BACOVA_04405 at 319.994 kb on - strand, within BACOVA_04405 at 320.019 kb on + strand, within BACOVA_04405 at 320.020 kb on - strand, within BACOVA_04405 at 320.020 kb on - strand, within BACOVA_04405 at 320.113 kb on - strand, within BACOVA_04405 at 320.180 kb on + strand, within BACOVA_04405 at 320.208 kb on + strand, within BACOVA_04405 at 320.362 kb on - strand, within BACOVA_04405 at 320.389 kb on + strand, within BACOVA_04405 at 320.390 kb on - strand, within BACOVA_04405 at 320.487 kb on + strand, within BACOVA_04405 at 320.536 kb on + strand at 320.537 kb on - strand at 320.563 kb on - strand at 320.601 kb on - strand at 320.601 kb on - strand at 320.612 kb on - strand at 320.668 kb on + strand at 320.669 kb on - strand at 320.685 kb on - strand at 320.694 kb on - strand at 320.713 kb on + strand at 320.735 kb on - strand at 320.876 kb on + strand at 320.876 kb on + strand at 320.924 kb on + strand at 320.985 kb on + strand, within BACOVA_04406 at 321.014 kb on + strand, within BACOVA_04406 at 321.014 kb on + strand, within BACOVA_04406 at 321.025 kb on + strand, within BACOVA_04406 at 321.092 kb on + strand, within BACOVA_04406 at 321.249 kb on + strand, within BACOVA_04406 at 321.270 kb on + strand, within BACOVA_04406 at 321.270 kb on + strand, within BACOVA_04406 at 321.270 kb on + strand, within BACOVA_04406 at 321.270 kb on + strand, within BACOVA_04406 at 321.271 kb on - strand, within BACOVA_04406 at 321.395 kb on + strand, within BACOVA_04406 at 321.499 kb on + strand, within BACOVA_04406 at 321.499 kb on + strand, within BACOVA_04406 at 321.506 kb on - strand, within BACOVA_04406 at 321.570 kb on - strand, within BACOVA_04406 at 321.570 kb on - strand, within BACOVA_04406 at 321.653 kb on + strand, within BACOVA_04406 at 321.695 kb on + strand, within BACOVA_04406 at 321.695 kb on + strand, within BACOVA_04406 at 321.725 kb on - strand, within BACOVA_04406 at 321.725 kb on - strand, within BACOVA_04406 at 321.842 kb on - strand, within BACOVA_04406 at 321.888 kb on - strand, within BACOVA_04406 at 321.907 kb on + strand, within BACOVA_04406 at 321.945 kb on - strand, within BACOVA_04406 at 322.106 kb on + strand, within BACOVA_04406 at 322.106 kb on + strand, within BACOVA_04406 at 322.106 kb on + strand, within BACOVA_04406 at 322.106 kb on + strand, within BACOVA_04406 at 322.108 kb on + strand, within BACOVA_04406 at 322.130 kb on + strand, within BACOVA_04406 at 322.131 kb on - strand, within BACOVA_04406 at 322.133 kb on + strand, within BACOVA_04406 at 322.134 kb on - strand, within BACOVA_04406 at 322.146 kb on + strand, within BACOVA_04406 at 322.216 kb on + strand, within BACOVA_04406 at 322.218 kb on + strand, within BACOVA_04406 at 322.230 kb on - strand, within BACOVA_04406 at 322.230 kb on - strand, within BACOVA_04406 at 322.230 kb on - strand, within BACOVA_04406 at 322.249 kb on + strand, within BACOVA_04406 at 322.250 kb on - strand, within BACOVA_04406 at 322.261 kb on + strand, within BACOVA_04406 at 322.285 kb on - strand, within BACOVA_04406 at 322.325 kb on + strand, within BACOVA_04406 at 322.326 kb on - strand, within BACOVA_04406 at 322.356 kb on - strand, within BACOVA_04406 at 322.389 kb on - strand, within BACOVA_04406 at 322.389 kb on - strand, within BACOVA_04406 at 322.413 kb on - strand, within BACOVA_04406 at 322.421 kb on + strand, within BACOVA_04406 at 322.433 kb on + strand, within BACOVA_04406 at 322.433 kb on + strand, within BACOVA_04406 at 322.491 kb on - strand, within BACOVA_04406 at 322.491 kb on - strand, within BACOVA_04406 at 322.538 kb on + strand, within BACOVA_04406 at 322.538 kb on + strand, within BACOVA_04406 at 322.538 kb on + strand, within BACOVA_04406 at 322.538 kb on + strand, within BACOVA_04406 at 322.539 kb on - strand, within BACOVA_04406 at 322.539 kb on - strand, within BACOVA_04406 at 322.539 kb on - strand, within BACOVA_04406 at 322.539 kb on - strand, within BACOVA_04406 at 322.549 kb on + strand, within BACOVA_04406 at 322.586 kb on + strand, within BACOVA_04406 at 322.658 kb on + strand, within BACOVA_04406 at 322.658 kb on + strand, within BACOVA_04406 at 322.658 kb on + strand, within BACOVA_04406 at 322.658 kb on + strand, within BACOVA_04406 at 322.659 kb on - strand, within BACOVA_04406 at 322.708 kb on + strand at 322.708 kb on + strand at 322.780 kb on + strand at 322.781 kb on - strand at 322.795 kb on + strand at 322.795 kb on + strand at 322.795 kb on + strand at 322.796 kb on - strand at 322.815 kb on + strand at 322.815 kb on + strand at 322.845 kb on + strand at 322.856 kb on + strand at 322.899 kb on + strand at 322.899 kb on + strand at 322.900 kb on - strand at 322.927 kb on + strand at 322.927 kb on + strand at 322.928 kb on - strand at 322.928 kb on - strand at 322.937 kb on + strand at 322.951 kb on - strand at 323.028 kb on - strand at 323.069 kb on - strand at 323.095 kb on + strand at 323.095 kb on + strand at 323.096 kb on - strand at 323.096 kb on - strand at 323.105 kb on + strand at 323.106 kb on - strand at 323.106 kb on - strand at 323.107 kb on + strand at 323.107 kb on + strand at 323.108 kb on - strand at 323.108 kb on - strand at 323.108 kb on - strand at 323.108 kb on - strand at 323.108 kb on - strand at 323.109 kb on + strand at 323.110 kb on - strand at 323.195 kb on + strand, within BACOVA_04407 at 323.196 kb on - strand, within BACOVA_04407 at 323.254 kb on - strand, within BACOVA_04407 at 323.288 kb on - strand, within BACOVA_04407 at 323.335 kb on - strand, within BACOVA_04407 at 323.365 kb on - strand, within BACOVA_04407 at 323.365 kb on - strand, within BACOVA_04407 at 323.472 kb on + strand at 323.488 kb on + strand at 323.512 kb on - strand at 323.514 kb on - strand at 323.537 kb on + strand at 323.538 kb on - strand at 323.538 kb on - strand at 323.630 kb on + strand, within BACOVA_04408 at 323.679 kb on + strand, within BACOVA_04408 at 323.680 kb on - strand, within BACOVA_04408 at 323.680 kb on - strand, within BACOVA_04408 at 323.680 kb on - strand, within BACOVA_04408 at 323.828 kb on + strand, within BACOVA_04408 at 323.828 kb on + strand, within BACOVA_04408 at 323.829 kb on - strand, within BACOVA_04408 at 323.830 kb on + strand, within BACOVA_04408 at 323.831 kb on - strand, within BACOVA_04408 at 323.839 kb on - strand, within BACOVA_04408 at 323.893 kb on - strand, within BACOVA_04408 at 323.893 kb on - strand, within BACOVA_04408 at 323.893 kb on - strand, within BACOVA_04408 at 323.895 kb on + strand, within BACOVA_04408 at 323.895 kb on + strand, within BACOVA_04408 at 323.896 kb on - strand, within BACOVA_04408
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose 10 mM (C) remove 319,732 + BACOVA_04405 0.55 +0.0 319,732 + BACOVA_04405 0.55 -0.2 319,733 - BACOVA_04405 0.55 +1.3 319,733 - BACOVA_04405 0.55 -1.8 319,782 - BACOVA_04405 0.57 -0.1 319,785 - BACOVA_04405 0.57 -2.3 319,901 - BACOVA_04405 0.63 -1.7 319,918 + BACOVA_04405 0.63 +0.2 319,920 + BACOVA_04405 0.63 +0.5 319,994 - BACOVA_04405 0.67 +0.0 320,019 + BACOVA_04405 0.68 +1.0 320,020 - BACOVA_04405 0.68 -0.2 320,020 - BACOVA_04405 0.68 +0.5 320,113 - BACOVA_04405 0.72 -0.6 320,180 + BACOVA_04405 0.75 +0.0 320,208 + BACOVA_04405 0.77 +1.1 320,362 - BACOVA_04405 0.84 +0.6 320,389 + BACOVA_04405 0.85 +1.1 320,390 - BACOVA_04405 0.85 -0.1 320,487 + BACOVA_04405 0.89 -0.1 320,536 + +0.0 320,537 - +0.0 320,563 - +0.3 320,601 - +0.3 320,601 - -1.8 320,612 - +0.9 320,668 + -1.8 320,669 - -1.4 320,685 - -1.3 320,694 - -1.0 320,713 + -0.6 320,735 - +0.1 320,876 + -0.3 320,876 + +0.0 320,924 + -1.5 320,985 + BACOVA_04406 0.12 +0.4 321,014 + BACOVA_04406 0.13 -0.8 321,014 + BACOVA_04406 0.13 +0.4 321,025 + BACOVA_04406 0.14 -0.2 321,092 + BACOVA_04406 0.17 +0.2 321,249 + BACOVA_04406 0.24 -0.9 321,270 + BACOVA_04406 0.25 +1.3 321,270 + BACOVA_04406 0.25 -0.5 321,270 + BACOVA_04406 0.25 -1.0 321,270 + BACOVA_04406 0.25 -0.5 321,271 - BACOVA_04406 0.25 -1.1 321,395 + BACOVA_04406 0.31 -0.3 321,499 + BACOVA_04406 0.35 +1.3 321,499 + BACOVA_04406 0.35 +0.3 321,506 - BACOVA_04406 0.36 +1.0 321,570 - BACOVA_04406 0.39 -0.1 321,570 - BACOVA_04406 0.39 -2.3 321,653 + BACOVA_04406 0.42 -0.4 321,695 + BACOVA_04406 0.44 +0.0 321,695 + BACOVA_04406 0.44 -1.3 321,725 - BACOVA_04406 0.46 +1.0 321,725 - BACOVA_04406 0.46 +1.0 321,842 - BACOVA_04406 0.51 -0.1 321,888 - BACOVA_04406 0.53 -1.5 321,907 + BACOVA_04406 0.54 +1.0 321,945 - BACOVA_04406 0.56 +0.5 322,106 + BACOVA_04406 0.63 +0.6 322,106 + BACOVA_04406 0.63 +0.0 322,106 + BACOVA_04406 0.63 -0.6 322,106 + BACOVA_04406 0.63 +0.6 322,108 + BACOVA_04406 0.63 -1.3 322,130 + BACOVA_04406 0.64 -0.6 322,131 - BACOVA_04406 0.64 -1.5 322,133 + BACOVA_04406 0.64 -0.2 322,134 - BACOVA_04406 0.64 +1.3 322,146 + BACOVA_04406 0.65 -1.0 322,216 + BACOVA_04406 0.68 +0.8 322,218 + BACOVA_04406 0.68 +0.5 322,230 - BACOVA_04406 0.69 +0.7 322,230 - BACOVA_04406 0.69 +1.6 322,230 - BACOVA_04406 0.69 +0.2 322,249 + BACOVA_04406 0.69 -0.8 322,250 - BACOVA_04406 0.69 -1.0 322,261 + BACOVA_04406 0.70 +0.2 322,285 - BACOVA_04406 0.71 -0.4 322,325 + BACOVA_04406 0.73 +1.0 322,326 - BACOVA_04406 0.73 +0.0 322,356 - BACOVA_04406 0.74 -1.8 322,389 - BACOVA_04406 0.76 -0.5 322,389 - BACOVA_04406 0.76 -1.2 322,413 - BACOVA_04406 0.77 -0.8 322,421 + BACOVA_04406 0.77 -0.6 322,433 + BACOVA_04406 0.78 +2.0 322,433 + BACOVA_04406 0.78 +0.2 322,491 - BACOVA_04406 0.80 -1.3 322,491 - BACOVA_04406 0.80 -0.1 322,538 + BACOVA_04406 0.82 -1.3 322,538 + BACOVA_04406 0.82 -0.5 322,538 + BACOVA_04406 0.82 -0.5 322,538 + BACOVA_04406 0.82 +0.0 322,539 - BACOVA_04406 0.83 -0.7 322,539 - BACOVA_04406 0.83 +1.2 322,539 - BACOVA_04406 0.83 +0.4 322,539 - BACOVA_04406 0.83 +1.0 322,549 + BACOVA_04406 0.83 -1.0 322,586 + BACOVA_04406 0.85 -1.2 322,658 + BACOVA_04406 0.88 -2.4 322,658 + BACOVA_04406 0.88 -0.3 322,658 + BACOVA_04406 0.88 -0.5 322,658 + BACOVA_04406 0.88 -2.7 322,659 - BACOVA_04406 0.88 +1.0 322,708 + +0.4 322,708 + -1.0 322,780 + -0.5 322,781 - +0.4 322,795 + -0.8 322,795 + -0.2 322,795 + -0.2 322,796 - -1.3 322,815 + -1.8 322,815 + +0.0 322,845 + +0.1 322,856 + +0.5 322,899 + +0.2 322,899 + +0.2 322,900 - -0.5 322,927 + +0.4 322,927 + -0.9 322,928 - -0.1 322,928 - +1.0 322,937 + +0.5 322,951 - -3.0 323,028 - -1.0 323,069 - +0.0 323,095 + +2.1 323,095 + +0.0 323,096 - -0.3 323,096 - +0.3 323,105 + +0.0 323,106 - +0.3 323,106 - -0.9 323,107 + +0.5 323,107 + -0.5 323,108 - +0.1 323,108 - -0.8 323,108 - -0.8 323,108 - +0.5 323,108 - -0.1 323,109 + +0.2 323,110 - +1.4 323,195 + BACOVA_04407 0.27 +0.0 323,196 - BACOVA_04407 0.27 +1.0 323,254 - BACOVA_04407 0.41 +0.6 323,288 - BACOVA_04407 0.48 -0.5 323,335 - BACOVA_04407 0.59 +0.5 323,365 - BACOVA_04407 0.66 +0.3 323,365 - BACOVA_04407 0.66 -0.4 323,472 + +0.1 323,488 + -0.5 323,512 - -2.7 323,514 - +1.0 323,537 + -0.8 323,538 - +1.2 323,538 - +1.9 323,630 + BACOVA_04408 0.12 +0.1 323,679 + BACOVA_04408 0.26 +0.6 323,680 - BACOVA_04408 0.26 +0.1 323,680 - BACOVA_04408 0.26 -0.3 323,680 - BACOVA_04408 0.26 +0.6 323,828 + BACOVA_04408 0.69 +1.0 323,828 + BACOVA_04408 0.69 -0.3 323,829 - BACOVA_04408 0.70 -1.3 323,830 + BACOVA_04408 0.70 -0.0 323,831 - BACOVA_04408 0.70 -0.5 323,839 - BACOVA_04408 0.72 -0.8 323,893 - BACOVA_04408 0.88 +1.0 323,893 - BACOVA_04408 0.88 +1.3 323,893 - BACOVA_04408 0.88 -0.3 323,895 + BACOVA_04408 0.89 +0.2 323,895 + BACOVA_04408 0.89 +0.5 323,896 - BACOVA_04408 0.89 -0.1
Or see this region's nucleotide sequence