Experiment: D-Galactose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_04276 and BACOVA_04277 are separated by 110 nucleotides BACOVA_04277 and BACOVA_04278 are separated by 2 nucleotides BACOVA_04278 and BACOVA_04279 are separated by 88 nucleotides
BACOVA_04276: BACOVA_04276 - mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase, at 164,020 to 164,925
_04276
BACOVA_04277: BACOVA_04277 - putative cytidine deaminase, at 165,036 to 165,518
_04277
BACOVA_04278: BACOVA_04278 - transcriptional regulator, AraC family, at 165,521 to 166,360
_04278
BACOVA_04279: BACOVA_04279 - hypothetical protein, at 166,449 to 167,030
_04279
Position (kb) 165
166 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 164.070 kb on + strand at 164.154 kb on - strand, within BACOVA_04276 at 164.155 kb on + strand, within BACOVA_04276 at 164.155 kb on + strand, within BACOVA_04276 at 164.155 kb on + strand, within BACOVA_04276 at 164.156 kb on - strand, within BACOVA_04276 at 164.156 kb on - strand, within BACOVA_04276 at 164.156 kb on - strand, within BACOVA_04276 at 164.156 kb on - strand, within BACOVA_04276 at 164.160 kb on + strand, within BACOVA_04276 at 164.205 kb on + strand, within BACOVA_04276 at 164.206 kb on - strand, within BACOVA_04276 at 164.224 kb on - strand, within BACOVA_04276 at 164.268 kb on + strand, within BACOVA_04276 at 164.302 kb on - strand, within BACOVA_04276 at 164.325 kb on - strand, within BACOVA_04276 at 164.344 kb on - strand, within BACOVA_04276 at 164.346 kb on - strand, within BACOVA_04276 at 164.400 kb on - strand, within BACOVA_04276 at 164.422 kb on - strand, within BACOVA_04276 at 164.422 kb on - strand, within BACOVA_04276 at 164.424 kb on - strand, within BACOVA_04276 at 164.443 kb on - strand, within BACOVA_04276 at 164.460 kb on + strand, within BACOVA_04276 at 164.517 kb on + strand, within BACOVA_04276 at 164.519 kb on + strand, within BACOVA_04276 at 164.529 kb on + strand, within BACOVA_04276 at 164.591 kb on + strand, within BACOVA_04276 at 164.611 kb on - strand, within BACOVA_04276 at 164.613 kb on - strand, within BACOVA_04276 at 164.613 kb on - strand, within BACOVA_04276 at 164.613 kb on - strand, within BACOVA_04276 at 164.686 kb on - strand, within BACOVA_04276 at 164.764 kb on - strand, within BACOVA_04276 at 164.816 kb on + strand, within BACOVA_04276 at 164.816 kb on + strand, within BACOVA_04276 at 164.816 kb on + strand, within BACOVA_04276 at 164.820 kb on + strand, within BACOVA_04276 at 164.820 kb on + strand, within BACOVA_04276 at 164.821 kb on - strand, within BACOVA_04276 at 164.825 kb on - strand, within BACOVA_04276 at 164.907 kb on + strand at 164.908 kb on - strand at 164.945 kb on - strand at 164.978 kb on + strand at 164.979 kb on - strand at 165.007 kb on + strand at 165.008 kb on - strand at 165.008 kb on - strand at 165.028 kb on + strand at 165.033 kb on + strand at 165.033 kb on + strand at 165.033 kb on + strand at 165.034 kb on - strand at 165.034 kb on - strand at 165.035 kb on + strand at 165.053 kb on + strand at 165.060 kb on - strand at 165.062 kb on + strand at 165.065 kb on + strand at 165.066 kb on - strand at 165.071 kb on - strand at 165.072 kb on + strand at 165.079 kb on - strand at 165.079 kb on - strand at 165.110 kb on + strand, within BACOVA_04277 at 165.144 kb on + strand, within BACOVA_04277 at 165.202 kb on + strand, within BACOVA_04277 at 165.202 kb on + strand, within BACOVA_04277 at 165.260 kb on + strand, within BACOVA_04277 at 165.260 kb on + strand, within BACOVA_04277 at 165.261 kb on - strand, within BACOVA_04277 at 165.261 kb on - strand, within BACOVA_04277 at 165.263 kb on + strand, within BACOVA_04277 at 165.269 kb on - strand, within BACOVA_04277 at 165.269 kb on - strand, within BACOVA_04277 at 165.269 kb on - strand, within BACOVA_04277 at 165.409 kb on - strand, within BACOVA_04277 at 165.433 kb on + strand, within BACOVA_04277 at 165.433 kb on + strand, within BACOVA_04277 at 165.434 kb on - strand, within BACOVA_04277 at 165.453 kb on + strand, within BACOVA_04277 at 165.460 kb on + strand, within BACOVA_04277 at 165.468 kb on - strand, within BACOVA_04277 at 165.520 kb on + strand at 165.520 kb on + strand at 165.520 kb on + strand at 165.533 kb on + strand at 165.547 kb on - strand at 165.566 kb on - strand at 165.566 kb on - strand at 165.575 kb on + strand at 165.575 kb on + strand at 165.624 kb on + strand, within BACOVA_04278 at 165.631 kb on - strand, within BACOVA_04278 at 165.646 kb on + strand, within BACOVA_04278 at 165.652 kb on - strand, within BACOVA_04278 at 165.875 kb on - strand, within BACOVA_04278 at 165.916 kb on + strand, within BACOVA_04278 at 165.917 kb on - strand, within BACOVA_04278 at 165.948 kb on + strand, within BACOVA_04278 at 165.982 kb on + strand, within BACOVA_04278 at 166.058 kb on - strand, within BACOVA_04278 at 166.226 kb on + strand, within BACOVA_04278 at 166.259 kb on - strand, within BACOVA_04278 at 166.327 kb on - strand at 166.376 kb on + strand at 166.383 kb on - strand at 166.420 kb on + strand at 166.421 kb on - strand at 166.421 kb on - strand at 166.421 kb on - strand at 166.426 kb on - strand at 166.435 kb on - strand at 166.471 kb on + strand at 166.472 kb on - strand at 166.472 kb on - strand at 166.512 kb on - strand, within BACOVA_04279
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose 10 mM (C) remove 164,070 + -0.7 164,154 - BACOVA_04276 0.15 -1.2 164,155 + BACOVA_04276 0.15 -0.2 164,155 + BACOVA_04276 0.15 +0.2 164,155 + BACOVA_04276 0.15 +3.0 164,156 - BACOVA_04276 0.15 -1.8 164,156 - BACOVA_04276 0.15 +0.0 164,156 - BACOVA_04276 0.15 +1.8 164,156 - BACOVA_04276 0.15 -0.4 164,160 + BACOVA_04276 0.15 +1.1 164,205 + BACOVA_04276 0.20 -0.6 164,206 - BACOVA_04276 0.21 -0.6 164,224 - BACOVA_04276 0.23 +0.0 164,268 + BACOVA_04276 0.27 -0.9 164,302 - BACOVA_04276 0.31 +0.0 164,325 - BACOVA_04276 0.34 -1.3 164,344 - BACOVA_04276 0.36 -0.6 164,346 - BACOVA_04276 0.36 +0.4 164,400 - BACOVA_04276 0.42 -2.3 164,422 - BACOVA_04276 0.44 -2.7 164,422 - BACOVA_04276 0.44 -0.8 164,424 - BACOVA_04276 0.45 -1.2 164,443 - BACOVA_04276 0.47 -0.1 164,460 + BACOVA_04276 0.49 +0.0 164,517 + BACOVA_04276 0.55 -1.3 164,519 + BACOVA_04276 0.55 -0.6 164,529 + BACOVA_04276 0.56 -2.0 164,591 + BACOVA_04276 0.63 -0.6 164,611 - BACOVA_04276 0.65 -1.6 164,613 - BACOVA_04276 0.65 +0.0 164,613 - BACOVA_04276 0.65 -2.2 164,613 - BACOVA_04276 0.65 +0.5 164,686 - BACOVA_04276 0.74 -1.3 164,764 - BACOVA_04276 0.82 -3.0 164,816 + BACOVA_04276 0.88 +0.0 164,816 + BACOVA_04276 0.88 +0.4 164,816 + BACOVA_04276 0.88 +0.0 164,820 + BACOVA_04276 0.88 -2.0 164,820 + BACOVA_04276 0.88 -0.6 164,821 - BACOVA_04276 0.88 +2.6 164,825 - BACOVA_04276 0.89 -1.3 164,907 + +0.0 164,908 - -0.6 164,945 - +0.5 164,978 + -1.2 164,979 - -0.6 165,007 + +1.6 165,008 - +0.4 165,008 - -1.5 165,028 + -1.8 165,033 + -1.0 165,033 + -0.6 165,033 + -3.7 165,034 - +2.6 165,034 - +0.6 165,035 + -0.4 165,053 + -0.6 165,060 - -1.6 165,062 + +0.0 165,065 + -1.0 165,066 - -2.6 165,071 - +0.8 165,072 + -1.8 165,079 - -0.6 165,079 - -1.6 165,110 + BACOVA_04277 0.15 -1.2 165,144 + BACOVA_04277 0.22 -0.8 165,202 + BACOVA_04277 0.34 +0.0 165,202 + BACOVA_04277 0.34 +1.1 165,260 + BACOVA_04277 0.46 +0.0 165,260 + BACOVA_04277 0.46 +1.0 165,261 - BACOVA_04277 0.47 -1.2 165,261 - BACOVA_04277 0.47 -0.6 165,263 + BACOVA_04277 0.47 -4.1 165,269 - BACOVA_04277 0.48 -1.6 165,269 - BACOVA_04277 0.48 -2.7 165,269 - BACOVA_04277 0.48 -0.2 165,409 - BACOVA_04277 0.77 -1.8 165,433 + BACOVA_04277 0.82 -0.4 165,433 + BACOVA_04277 0.82 +0.0 165,434 - BACOVA_04277 0.82 +0.9 165,453 + BACOVA_04277 0.86 -1.9 165,460 + BACOVA_04277 0.88 -0.6 165,468 - BACOVA_04277 0.89 -1.3 165,520 + +0.7 165,520 + -1.5 165,520 + -0.0 165,533 + +1.8 165,547 - -1.1 165,566 - -1.3 165,566 - +1.7 165,575 + +0.4 165,575 + -0.1 165,624 + BACOVA_04278 0.12 +0.8 165,631 - BACOVA_04278 0.13 +0.6 165,646 + BACOVA_04278 0.15 +0.8 165,652 - BACOVA_04278 0.16 -1.3 165,875 - BACOVA_04278 0.42 -0.6 165,916 + BACOVA_04278 0.47 -1.6 165,917 - BACOVA_04278 0.47 +0.5 165,948 + BACOVA_04278 0.51 +1.1 165,982 + BACOVA_04278 0.55 +1.4 166,058 - BACOVA_04278 0.64 -0.1 166,226 + BACOVA_04278 0.84 -1.6 166,259 - BACOVA_04278 0.88 +0.5 166,327 - +0.4 166,376 + +1.2 166,383 - +0.6 166,420 + +0.0 166,421 - +1.3 166,421 - +0.6 166,421 - +0.1 166,426 - +1.2 166,435 - -0.4 166,471 + -1.4 166,472 - -0.2 166,472 - +0.2 166,512 - BACOVA_04279 0.11 -1.4
Or see this region's nucleotide sequence