Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_03677

Experiment: D-Galactose 10 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_03676 and BACOVA_03677 are separated by 3 nucleotidesBACOVA_03677 and BACOVA_03678 are separated by 9 nucleotides BACOVA_03676: BACOVA_03676 - hypothetical protein, at 2,732 to 3,841 _03676 BACOVA_03677: BACOVA_03677 - bacterial transferase hexapeptide repeat protein, at 3,845 to 4,369 _03677 BACOVA_03678: BACOVA_03678 - polysaccharide biosynthesis protein, at 4,379 to 5,833 _03678 Position (kb) 3 4 5Strain fitness (log2 ratio) -2 -1 0 1 2 3at 2.851 kb on - strand, within BACOVA_03676at 2.857 kb on + strand, within BACOVA_03676at 2.876 kb on + strand, within BACOVA_03676at 2.877 kb on - strand, within BACOVA_03676at 2.993 kb on + strand, within BACOVA_03676at 2.993 kb on + strand, within BACOVA_03676at 2.994 kb on - strand, within BACOVA_03676at 2.999 kb on - strand, within BACOVA_03676at 3.064 kb on + strand, within BACOVA_03676at 3.070 kb on + strand, within BACOVA_03676at 3.070 kb on + strand, within BACOVA_03676at 3.070 kb on + strand, within BACOVA_03676at 3.072 kb on + strand, within BACOVA_03676at 3.072 kb on + strand, within BACOVA_03676at 3.075 kb on + strand, within BACOVA_03676at 3.076 kb on - strand, within BACOVA_03676at 3.150 kb on + strand, within BACOVA_03676at 3.159 kb on + strand, within BACOVA_03676at 3.201 kb on + strand, within BACOVA_03676at 3.202 kb on - strand, within BACOVA_03676at 3.204 kb on - strand, within BACOVA_03676at 3.216 kb on + strand, within BACOVA_03676at 3.266 kb on - strand, within BACOVA_03676at 3.271 kb on + strand, within BACOVA_03676at 3.272 kb on - strand, within BACOVA_03676at 3.275 kb on + strand, within BACOVA_03676at 3.276 kb on - strand, within BACOVA_03676at 3.387 kb on - strand, within BACOVA_03676at 3.390 kb on + strand, within BACOVA_03676at 3.390 kb on + strand, within BACOVA_03676at 3.403 kb on + strand, within BACOVA_03676at 3.408 kb on - strand, within BACOVA_03676at 3.457 kb on + strand, within BACOVA_03676at 3.459 kb on + strand, within BACOVA_03676at 3.482 kb on - strand, within BACOVA_03676at 3.504 kb on + strand, within BACOVA_03676at 3.537 kb on + strand, within BACOVA_03676at 3.540 kb on + strand, within BACOVA_03676at 3.541 kb on - strand, within BACOVA_03676at 3.542 kb on + strand, within BACOVA_03676at 3.583 kb on + strand, within BACOVA_03676at 3.584 kb on - strand, within BACOVA_03676at 3.584 kb on - strand, within BACOVA_03676at 3.643 kb on + strand, within BACOVA_03676at 3.644 kb on - strand, within BACOVA_03676at 3.653 kb on + strand, within BACOVA_03676at 3.676 kb on + strand, within BACOVA_03676at 3.681 kb on + strand, within BACOVA_03676at 3.682 kb on - strand, within BACOVA_03676at 3.712 kb on - strand, within BACOVA_03676at 3.736 kb on + strandat 3.737 kb on - strandat 3.888 kb on - strandat 3.889 kb on + strandat 3.898 kb on - strand, within BACOVA_03677at 3.925 kb on + strand, within BACOVA_03677at 3.938 kb on + strand, within BACOVA_03677at 3.939 kb on - strand, within BACOVA_03677at 3.939 kb on - strand, within BACOVA_03677at 3.939 kb on - strand, within BACOVA_03677at 3.939 kb on - strand, within BACOVA_03677at 3.941 kb on - strand, within BACOVA_03677at 3.941 kb on - strand, within BACOVA_03677at 3.970 kb on + strand, within BACOVA_03677at 3.978 kb on - strand, within BACOVA_03677at 3.978 kb on - strand, within BACOVA_03677at 3.995 kb on + strand, within BACOVA_03677at 3.996 kb on - strand, within BACOVA_03677at 4.033 kb on - strand, within BACOVA_03677at 4.079 kb on - strand, within BACOVA_03677at 4.091 kb on - strand, within BACOVA_03677at 4.130 kb on + strand, within BACOVA_03677at 4.131 kb on - strand, within BACOVA_03677at 4.131 kb on - strand, within BACOVA_03677at 4.133 kb on - strand, within BACOVA_03677at 4.225 kb on + strand, within BACOVA_03677at 4.225 kb on + strand, within BACOVA_03677at 4.225 kb on + strand, within BACOVA_03677at 4.226 kb on - strand, within BACOVA_03677at 4.226 kb on - strand, within BACOVA_03677at 4.258 kb on + strand, within BACOVA_03677at 4.269 kb on + strand, within BACOVA_03677at 4.269 kb on + strand, within BACOVA_03677at 4.270 kb on - strand, within BACOVA_03677at 4.273 kb on + strand, within BACOVA_03677at 4.274 kb on - strand, within BACOVA_03677at 4.316 kb on + strand, within BACOVA_03677at 4.316 kb on + strand, within BACOVA_03677at 4.318 kb on + strandat 4.339 kb on + strandat 4.345 kb on - strandat 4.346 kb on + strandat 4.347 kb on - strandat 4.369 kb on + strandat 4.372 kb on + strandat 4.385 kb on - strandat 4.389 kb on - strandat 4.439 kb on + strandat 4.439 kb on + strandat 4.441 kb on + strandat 4.443 kb on + strandat 4.443 kb on + strandat 4.473 kb on - strandat 4.475 kb on + strandat 4.498 kb on + strandat 4.540 kb on + strand, within BACOVA_03678at 4.570 kb on + strand, within BACOVA_03678at 4.571 kb on - strand, within BACOVA_03678at 4.620 kb on - strand, within BACOVA_03678at 4.653 kb on + strand, within BACOVA_03678at 4.664 kb on + strand, within BACOVA_03678at 4.722 kb on + strand, within BACOVA_03678at 4.738 kb on + strand, within BACOVA_03678at 4.798 kb on + strand, within BACOVA_03678at 4.798 kb on + strand, within BACOVA_03678at 4.802 kb on - strand, within BACOVA_03678at 4.860 kb on - strand, within BACOVA_03678at 4.878 kb on + strand, within BACOVA_03678at 4.879 kb on - strand, within BACOVA_03678at 4.882 kb on + strand, within BACOVA_03678at 4.883 kb on - strand, within BACOVA_03678at 4.905 kb on - strand, within BACOVA_03678at 4.948 kb on + strand, within BACOVA_03678at 4.980 kb on + strand, within BACOVA_03678at 4.994 kb on - strand, within BACOVA_03678at 5.041 kb on + strand, within BACOVA_03678at 5.045 kb on + strand, within BACOVA_03678at 5.046 kb on - strand, within BACOVA_03678at 5.054 kb on - strand, within BACOVA_03678at 5.074 kb on + strand, within BACOVA_03678at 5.098 kb on + strand, within BACOVA_03678at 5.098 kb on + strand, within BACOVA_03678at 5.193 kb on + strand, within BACOVA_03678at 5.326 kb on + strand, within BACOVA_03678

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Galactose 10 mM (C)
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2,851 - BACOVA_03676 0.11 -0.1
2,857 + BACOVA_03676 0.11 -0.3
2,876 + BACOVA_03676 0.13 -1.7
2,877 - BACOVA_03676 0.13 -0.1
2,993 + BACOVA_03676 0.24 +1.1
2,993 + BACOVA_03676 0.24 -0.1
2,994 - BACOVA_03676 0.24 +0.5
2,999 - BACOVA_03676 0.24 +1.5
3,064 + BACOVA_03676 0.30 +1.1
3,070 + BACOVA_03676 0.30 -0.5
3,070 + BACOVA_03676 0.30 -0.1
3,070 + BACOVA_03676 0.30 -0.4
3,072 + BACOVA_03676 0.31 +0.9
3,072 + BACOVA_03676 0.31 +0.5
3,075 + BACOVA_03676 0.31 -0.4
3,076 - BACOVA_03676 0.31 -0.1
3,150 + BACOVA_03676 0.38 +0.9
3,159 + BACOVA_03676 0.38 +0.9
3,201 + BACOVA_03676 0.42 +1.2
3,202 - BACOVA_03676 0.42 +2.1
3,204 - BACOVA_03676 0.43 +0.6
3,216 + BACOVA_03676 0.44 +0.3
3,266 - BACOVA_03676 0.48 +0.7
3,271 + BACOVA_03676 0.49 +1.2
3,272 - BACOVA_03676 0.49 +0.3
3,275 + BACOVA_03676 0.49 +0.3
3,276 - BACOVA_03676 0.49 +0.7
3,387 - BACOVA_03676 0.59 +1.6
3,390 + BACOVA_03676 0.59 +0.2
3,390 + BACOVA_03676 0.59 -1.4
3,403 + BACOVA_03676 0.60 +1.3
3,408 - BACOVA_03676 0.61 -1.1
3,457 + BACOVA_03676 0.65 -0.1
3,459 + BACOVA_03676 0.65 +1.1
3,482 - BACOVA_03676 0.68 -1.1
3,504 + BACOVA_03676 0.70 +0.1
3,537 + BACOVA_03676 0.73 -0.9
3,540 + BACOVA_03676 0.73 -0.5
3,541 - BACOVA_03676 0.73 +0.6
3,542 + BACOVA_03676 0.73 +0.2
3,583 + BACOVA_03676 0.77 +0.5
3,584 - BACOVA_03676 0.77 +0.3
3,584 - BACOVA_03676 0.77 +0.2
3,643 + BACOVA_03676 0.82 -1.1
3,644 - BACOVA_03676 0.82 +0.5
3,653 + BACOVA_03676 0.83 +1.2
3,676 + BACOVA_03676 0.85 -0.6
3,681 + BACOVA_03676 0.85 +0.4
3,682 - BACOVA_03676 0.86 +1.2
3,712 - BACOVA_03676 0.88 -1.1
3,736 + -1.1
3,737 - +0.3
3,888 - +1.1
3,889 + +2.1
3,898 - BACOVA_03677 0.10 -0.1
3,925 + BACOVA_03677 0.15 -0.4
3,938 + BACOVA_03677 0.18 +0.0
3,939 - BACOVA_03677 0.18 -1.0
3,939 - BACOVA_03677 0.18 +0.1
3,939 - BACOVA_03677 0.18 -0.7
3,939 - BACOVA_03677 0.18 -1.1
3,941 - BACOVA_03677 0.18 -0.9
3,941 - BACOVA_03677 0.18 +0.8
3,970 + BACOVA_03677 0.24 -0.9
3,978 - BACOVA_03677 0.25 -0.2
3,978 - BACOVA_03677 0.25 -1.9
3,995 + BACOVA_03677 0.29 -0.8
3,996 - BACOVA_03677 0.29 +0.9
4,033 - BACOVA_03677 0.36 -2.1
4,079 - BACOVA_03677 0.45 +0.6
4,091 - BACOVA_03677 0.47 -1.9
4,130 + BACOVA_03677 0.54 +3.4
4,131 - BACOVA_03677 0.54 -0.6
4,131 - BACOVA_03677 0.54 -0.9
4,133 - BACOVA_03677 0.55 +0.9
4,225 + BACOVA_03677 0.72 -1.4
4,225 + BACOVA_03677 0.72 -1.7
4,225 + BACOVA_03677 0.72 +0.1
4,226 - BACOVA_03677 0.73 +0.9
4,226 - BACOVA_03677 0.73 -0.8
4,258 + BACOVA_03677 0.79 -1.7
4,269 + BACOVA_03677 0.81 +0.2
4,269 + BACOVA_03677 0.81 +0.2
4,270 - BACOVA_03677 0.81 -1.7
4,273 + BACOVA_03677 0.82 +0.0
4,274 - BACOVA_03677 0.82 -0.4
4,316 + BACOVA_03677 0.90 +0.1
4,316 + BACOVA_03677 0.90 +0.2
4,318 + +0.5
4,339 + +0.7
4,345 - +0.1
4,346 + -0.4
4,347 - -0.0
4,369 + -1.1
4,372 + -0.1
4,385 - +0.9
4,389 - +2.2
4,439 + +1.2
4,439 + -0.1
4,441 + +1.9
4,443 + -0.7
4,443 + -1.4
4,473 - +0.5
4,475 + -0.1
4,498 + +1.9
4,540 + BACOVA_03678 0.11 +0.9
4,570 + BACOVA_03678 0.13 +0.8
4,571 - BACOVA_03678 0.13 -0.4
4,620 - BACOVA_03678 0.17 +2.2
4,653 + BACOVA_03678 0.19 +1.2
4,664 + BACOVA_03678 0.20 +1.1
4,722 + BACOVA_03678 0.24 +2.2
4,738 + BACOVA_03678 0.25 +1.3
4,798 + BACOVA_03678 0.29 +1.6
4,798 + BACOVA_03678 0.29 -0.2
4,802 - BACOVA_03678 0.29 -0.7
4,860 - BACOVA_03678 0.33 +1.7
4,878 + BACOVA_03678 0.34 +0.9
4,879 - BACOVA_03678 0.34 +0.5
4,882 + BACOVA_03678 0.35 -1.2
4,883 - BACOVA_03678 0.35 -2.1
4,905 - BACOVA_03678 0.36 -0.7
4,948 + BACOVA_03678 0.39 +2.3
4,980 + BACOVA_03678 0.41 -0.4
4,994 - BACOVA_03678 0.42 +0.9
5,041 + BACOVA_03678 0.45 +1.0
5,045 + BACOVA_03678 0.46 -0.5
5,046 - BACOVA_03678 0.46 -0.7
5,054 - BACOVA_03678 0.46 +0.9
5,074 + BACOVA_03678 0.48 -0.1
5,098 + BACOVA_03678 0.49 -1.4
5,098 + BACOVA_03678 0.49 +1.1
5,193 + BACOVA_03678 0.56 -0.7
5,326 + BACOVA_03678 0.65 -0.8

Or see this region's nucleotide sequence