Experiment: D-Galactose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_03117 and BACOVA_03118 are separated by 218 nucleotides BACOVA_03118 and BACOVA_03119 are separated by 154 nucleotides
BACOVA_03117: BACOVA_03117 - DNA polymerase III, alpha subunit, at 199,662 to 203,468
_03117
BACOVA_03118: BACOVA_03118 - glycosyl hydrolase family 2, sugar binding domain protein, at 203,687 to 206,929
_03118
BACOVA_03119: BACOVA_03119 - hypothetical protein, at 207,084 to 208,469
_03119
Position (kb) 203
204
205
206
207 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 203.493 kb on + strand at 203.494 kb on - strand at 203.500 kb on + strand at 203.512 kb on + strand at 203.518 kb on + strand at 203.542 kb on + strand at 203.542 kb on + strand at 203.543 kb on - strand at 203.544 kb on + strand at 203.598 kb on + strand at 203.599 kb on - strand at 203.609 kb on + strand at 203.609 kb on + strand at 203.609 kb on + strand at 203.610 kb on - strand at 203.628 kb on - strand at 203.668 kb on - strand at 203.672 kb on + strand at 203.721 kb on - strand at 203.721 kb on - strand at 203.767 kb on + strand at 203.768 kb on - strand at 203.768 kb on - strand at 203.798 kb on + strand at 203.806 kb on + strand at 203.833 kb on + strand at 203.833 kb on + strand at 203.833 kb on + strand at 203.833 kb on + strand at 203.838 kb on - strand at 203.838 kb on - strand at 203.912 kb on + strand at 203.913 kb on - strand at 203.925 kb on + strand at 203.926 kb on - strand at 203.926 kb on - strand at 203.926 kb on - strand at 203.926 kb on - strand at 203.926 kb on - strand at 203.981 kb on + strand at 203.997 kb on - strand at 203.999 kb on + strand at 203.999 kb on + strand at 203.999 kb on + strand at 203.999 kb on + strand at 204.001 kb on + strand at 204.002 kb on - strand at 204.046 kb on - strand, within BACOVA_03118 at 204.046 kb on - strand, within BACOVA_03118 at 204.068 kb on - strand, within BACOVA_03118 at 204.074 kb on - strand, within BACOVA_03118 at 204.130 kb on + strand, within BACOVA_03118 at 204.251 kb on - strand, within BACOVA_03118 at 204.281 kb on + strand, within BACOVA_03118 at 204.315 kb on - strand, within BACOVA_03118 at 204.368 kb on + strand, within BACOVA_03118 at 204.456 kb on + strand, within BACOVA_03118 at 204.457 kb on - strand, within BACOVA_03118 at 204.458 kb on + strand, within BACOVA_03118 at 204.462 kb on - strand, within BACOVA_03118 at 204.475 kb on + strand, within BACOVA_03118 at 204.475 kb on + strand, within BACOVA_03118 at 204.527 kb on - strand, within BACOVA_03118 at 204.542 kb on + strand, within BACOVA_03118 at 204.542 kb on + strand, within BACOVA_03118 at 204.558 kb on + strand, within BACOVA_03118 at 204.587 kb on + strand, within BACOVA_03118 at 204.588 kb on - strand, within BACOVA_03118 at 204.629 kb on - strand, within BACOVA_03118 at 204.726 kb on - strand, within BACOVA_03118 at 204.758 kb on + strand, within BACOVA_03118 at 204.797 kb on + strand, within BACOVA_03118 at 204.817 kb on + strand, within BACOVA_03118 at 204.828 kb on - strand, within BACOVA_03118 at 204.904 kb on + strand, within BACOVA_03118 at 204.922 kb on - strand, within BACOVA_03118 at 204.929 kb on - strand, within BACOVA_03118 at 204.964 kb on + strand, within BACOVA_03118 at 204.965 kb on - strand, within BACOVA_03118 at 204.965 kb on - strand, within BACOVA_03118 at 204.965 kb on - strand, within BACOVA_03118 at 204.989 kb on + strand, within BACOVA_03118 at 204.990 kb on - strand, within BACOVA_03118 at 205.006 kb on - strand, within BACOVA_03118 at 205.006 kb on - strand, within BACOVA_03118 at 205.038 kb on + strand, within BACOVA_03118 at 205.039 kb on - strand, within BACOVA_03118 at 205.084 kb on + strand, within BACOVA_03118 at 205.087 kb on - strand, within BACOVA_03118 at 205.168 kb on - strand, within BACOVA_03118 at 205.219 kb on - strand, within BACOVA_03118 at 205.223 kb on - strand, within BACOVA_03118 at 205.253 kb on + strand, within BACOVA_03118 at 205.254 kb on - strand, within BACOVA_03118 at 205.254 kb on - strand, within BACOVA_03118 at 205.366 kb on + strand, within BACOVA_03118 at 205.409 kb on - strand, within BACOVA_03118 at 205.448 kb on - strand, within BACOVA_03118 at 205.500 kb on + strand, within BACOVA_03118 at 205.501 kb on - strand, within BACOVA_03118 at 205.501 kb on - strand, within BACOVA_03118 at 205.517 kb on + strand, within BACOVA_03118 at 205.525 kb on + strand, within BACOVA_03118 at 205.526 kb on - strand, within BACOVA_03118 at 205.533 kb on + strand, within BACOVA_03118 at 205.533 kb on + strand, within BACOVA_03118 at 205.534 kb on - strand, within BACOVA_03118 at 205.608 kb on - strand, within BACOVA_03118 at 205.694 kb on - strand, within BACOVA_03118 at 205.752 kb on + strand, within BACOVA_03118 at 205.828 kb on + strand, within BACOVA_03118 at 205.908 kb on + strand, within BACOVA_03118 at 205.920 kb on + strand, within BACOVA_03118 at 205.939 kb on - strand, within BACOVA_03118 at 205.974 kb on - strand, within BACOVA_03118 at 205.998 kb on - strand, within BACOVA_03118 at 206.091 kb on + strand, within BACOVA_03118 at 206.124 kb on + strand, within BACOVA_03118 at 206.124 kb on + strand, within BACOVA_03118 at 206.124 kb on + strand, within BACOVA_03118 at 206.125 kb on - strand, within BACOVA_03118 at 206.134 kb on + strand, within BACOVA_03118 at 206.157 kb on + strand, within BACOVA_03118 at 206.158 kb on - strand, within BACOVA_03118 at 206.199 kb on - strand, within BACOVA_03118 at 206.199 kb on - strand, within BACOVA_03118 at 206.200 kb on + strand, within BACOVA_03118 at 206.241 kb on - strand, within BACOVA_03118 at 206.245 kb on + strand, within BACOVA_03118 at 206.246 kb on - strand, within BACOVA_03118 at 206.257 kb on + strand, within BACOVA_03118 at 206.333 kb on - strand, within BACOVA_03118 at 206.409 kb on + strand, within BACOVA_03118 at 206.423 kb on + strand, within BACOVA_03118 at 206.423 kb on + strand, within BACOVA_03118 at 206.424 kb on - strand, within BACOVA_03118 at 206.458 kb on + strand, within BACOVA_03118 at 206.466 kb on - strand, within BACOVA_03118 at 206.625 kb on - strand at 206.625 kb on - strand at 206.847 kb on + strand at 206.847 kb on + strand at 206.932 kb on - strand at 206.933 kb on + strand at 206.942 kb on - strand at 206.944 kb on - strand at 206.962 kb on + strand at 206.962 kb on + strand at 206.973 kb on - strand at 207.098 kb on + strand at 207.099 kb on - strand at 207.099 kb on - strand at 207.103 kb on + strand at 207.103 kb on + strand at 207.104 kb on - strand at 207.105 kb on + strand at 207.106 kb on - strand at 207.109 kb on - strand at 207.142 kb on + strand at 207.143 kb on - strand at 207.143 kb on - strand at 207.143 kb on - strand at 207.143 kb on - strand at 207.146 kb on + strand at 207.172 kb on + strand at 207.173 kb on - strand at 207.173 kb on - strand at 207.227 kb on + strand, within BACOVA_03119 at 207.291 kb on + strand, within BACOVA_03119 at 207.292 kb on - strand, within BACOVA_03119 at 207.292 kb on - strand, within BACOVA_03119 at 207.303 kb on - strand, within BACOVA_03119 at 207.342 kb on + strand, within BACOVA_03119 at 207.343 kb on - strand, within BACOVA_03119 at 207.389 kb on + strand, within BACOVA_03119 at 207.400 kb on + strand, within BACOVA_03119 at 207.408 kb on + strand, within BACOVA_03119 at 207.408 kb on + strand, within BACOVA_03119 at 207.409 kb on - strand, within BACOVA_03119 at 207.409 kb on - strand, within BACOVA_03119 at 207.409 kb on - strand, within BACOVA_03119 at 207.409 kb on - strand, within BACOVA_03119 at 207.409 kb on - strand, within BACOVA_03119 at 207.411 kb on - strand, within BACOVA_03119 at 207.413 kb on - strand, within BACOVA_03119 at 207.434 kb on + strand, within BACOVA_03119 at 207.434 kb on + strand, within BACOVA_03119 at 207.435 kb on - strand, within BACOVA_03119 at 207.522 kb on + strand, within BACOVA_03119 at 207.522 kb on + strand, within BACOVA_03119 at 207.526 kb on + strand, within BACOVA_03119 at 207.526 kb on + strand, within BACOVA_03119 at 207.527 kb on - strand, within BACOVA_03119 at 207.596 kb on - strand, within BACOVA_03119 at 207.625 kb on - strand, within BACOVA_03119 at 207.741 kb on - strand, within BACOVA_03119 at 207.768 kb on + strand, within BACOVA_03119 at 207.769 kb on - strand, within BACOVA_03119 at 207.896 kb on + strand, within BACOVA_03119
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose 10 mM (C) remove 203,493 + -0.6 203,494 - -0.3 203,500 + -0.1 203,512 + +0.2 203,518 + +0.6 203,542 + -1.2 203,542 + -0.9 203,543 - -0.5 203,544 + +0.4 203,598 + -1.7 203,599 - +1.9 203,609 + -0.5 203,609 + -3.6 203,609 + +0.7 203,610 - -0.1 203,628 - +0.2 203,668 - -0.2 203,672 + -0.3 203,721 - -0.3 203,721 - +0.7 203,767 + +0.9 203,768 - -0.2 203,768 - +0.8 203,798 + -1.4 203,806 + +0.9 203,833 + -0.8 203,833 + -0.9 203,833 + +0.2 203,833 + +0.8 203,838 - +0.0 203,838 - +1.0 203,912 + -0.8 203,913 - +0.5 203,925 + -1.1 203,926 - -0.0 203,926 - -2.7 203,926 - +0.5 203,926 - -0.6 203,926 - -1.0 203,981 + +0.1 203,997 - -0.1 203,999 + -0.3 203,999 + -1.3 203,999 + +1.0 203,999 + -2.3 204,001 + -0.2 204,002 - +1.4 204,046 - BACOVA_03118 0.11 -0.5 204,046 - BACOVA_03118 0.11 +0.4 204,068 - BACOVA_03118 0.12 -0.5 204,074 - BACOVA_03118 0.12 -0.0 204,130 + BACOVA_03118 0.14 -0.4 204,251 - BACOVA_03118 0.17 +0.1 204,281 + BACOVA_03118 0.18 -0.0 204,315 - BACOVA_03118 0.19 -0.6 204,368 + BACOVA_03118 0.21 -0.1 204,456 + BACOVA_03118 0.24 -0.6 204,457 - BACOVA_03118 0.24 -0.6 204,458 + BACOVA_03118 0.24 +0.3 204,462 - BACOVA_03118 0.24 -1.3 204,475 + BACOVA_03118 0.24 -2.6 204,475 + BACOVA_03118 0.24 -0.1 204,527 - BACOVA_03118 0.26 +1.1 204,542 + BACOVA_03118 0.26 -1.3 204,542 + BACOVA_03118 0.26 -0.7 204,558 + BACOVA_03118 0.27 -0.3 204,587 + BACOVA_03118 0.28 -0.7 204,588 - BACOVA_03118 0.28 +0.9 204,629 - BACOVA_03118 0.29 +1.2 204,726 - BACOVA_03118 0.32 -0.1 204,758 + BACOVA_03118 0.33 +0.7 204,797 + BACOVA_03118 0.34 +0.6 204,817 + BACOVA_03118 0.35 -0.1 204,828 - BACOVA_03118 0.35 -0.8 204,904 + BACOVA_03118 0.38 -0.1 204,922 - BACOVA_03118 0.38 +0.9 204,929 - BACOVA_03118 0.38 +2.0 204,964 + BACOVA_03118 0.39 -0.6 204,965 - BACOVA_03118 0.39 -0.9 204,965 - BACOVA_03118 0.39 +0.2 204,965 - BACOVA_03118 0.39 +0.1 204,989 + BACOVA_03118 0.40 +0.4 204,990 - BACOVA_03118 0.40 -1.8 205,006 - BACOVA_03118 0.41 -1.2 205,006 - BACOVA_03118 0.41 +0.7 205,038 + BACOVA_03118 0.42 -0.6 205,039 - BACOVA_03118 0.42 -0.2 205,084 + BACOVA_03118 0.43 -0.2 205,087 - BACOVA_03118 0.43 -0.8 205,168 - BACOVA_03118 0.46 -0.9 205,219 - BACOVA_03118 0.47 -0.3 205,223 - BACOVA_03118 0.47 +1.2 205,253 + BACOVA_03118 0.48 +0.4 205,254 - BACOVA_03118 0.48 +0.3 205,254 - BACOVA_03118 0.48 -1.3 205,366 + BACOVA_03118 0.52 -1.3 205,409 - BACOVA_03118 0.53 -0.7 205,448 - BACOVA_03118 0.54 -0.1 205,500 + BACOVA_03118 0.56 -0.7 205,501 - BACOVA_03118 0.56 -0.0 205,501 - BACOVA_03118 0.56 +1.7 205,517 + BACOVA_03118 0.56 +0.1 205,525 + BACOVA_03118 0.57 -1.7 205,526 - BACOVA_03118 0.57 -0.1 205,533 + BACOVA_03118 0.57 +0.2 205,533 + BACOVA_03118 0.57 +0.4 205,534 - BACOVA_03118 0.57 -0.1 205,608 - BACOVA_03118 0.59 +0.1 205,694 - BACOVA_03118 0.62 +0.5 205,752 + BACOVA_03118 0.64 -0.2 205,828 + BACOVA_03118 0.66 -2.5 205,908 + BACOVA_03118 0.68 +0.7 205,920 + BACOVA_03118 0.69 -0.8 205,939 - BACOVA_03118 0.69 -0.1 205,974 - BACOVA_03118 0.71 -1.8 205,998 - BACOVA_03118 0.71 -0.4 206,091 + BACOVA_03118 0.74 -0.6 206,124 + BACOVA_03118 0.75 -0.8 206,124 + BACOVA_03118 0.75 -2.3 206,124 + BACOVA_03118 0.75 +0.4 206,125 - BACOVA_03118 0.75 +2.0 206,134 + BACOVA_03118 0.75 +1.2 206,157 + BACOVA_03118 0.76 +1.0 206,158 - BACOVA_03118 0.76 +0.7 206,199 - BACOVA_03118 0.77 -0.8 206,199 - BACOVA_03118 0.77 +0.0 206,200 + BACOVA_03118 0.77 -0.8 206,241 - BACOVA_03118 0.79 -0.7 206,245 + BACOVA_03118 0.79 +0.7 206,246 - BACOVA_03118 0.79 -0.8 206,257 + BACOVA_03118 0.79 -0.8 206,333 - BACOVA_03118 0.82 -0.5 206,409 + BACOVA_03118 0.84 -0.9 206,423 + BACOVA_03118 0.84 +0.5 206,423 + BACOVA_03118 0.84 +0.2 206,424 - BACOVA_03118 0.84 +0.8 206,458 + BACOVA_03118 0.85 +0.5 206,466 - BACOVA_03118 0.86 -2.3 206,625 - -0.3 206,625 - +0.8 206,847 + -2.3 206,847 + +1.8 206,932 - +3.2 206,933 + -0.9 206,942 - -0.5 206,944 - +1.8 206,962 + -2.5 206,962 + -0.5 206,973 - +1.4 207,098 + -0.2 207,099 - +1.2 207,099 - +0.5 207,103 + +0.1 207,103 + -0.3 207,104 - +2.6 207,105 + -1.6 207,106 - -0.8 207,109 - -0.9 207,142 + +0.4 207,143 - -0.3 207,143 - -0.1 207,143 - +0.4 207,143 - -0.5 207,146 + +0.9 207,172 + -0.3 207,173 - -0.4 207,173 - +0.6 207,227 + BACOVA_03119 0.10 +1.0 207,291 + BACOVA_03119 0.15 +0.4 207,292 - BACOVA_03119 0.15 -0.3 207,292 - BACOVA_03119 0.15 +0.7 207,303 - BACOVA_03119 0.16 -1.1 207,342 + BACOVA_03119 0.19 -0.3 207,343 - BACOVA_03119 0.19 +1.2 207,389 + BACOVA_03119 0.22 -0.5 207,400 + BACOVA_03119 0.23 +1.8 207,408 + BACOVA_03119 0.23 +0.4 207,408 + BACOVA_03119 0.23 +0.5 207,409 - BACOVA_03119 0.23 -1.0 207,409 - BACOVA_03119 0.23 +0.2 207,409 - BACOVA_03119 0.23 -0.1 207,409 - BACOVA_03119 0.23 -0.6 207,409 - BACOVA_03119 0.23 -0.8 207,411 - BACOVA_03119 0.24 -0.9 207,413 - BACOVA_03119 0.24 +0.5 207,434 + BACOVA_03119 0.25 +0.3 207,434 + BACOVA_03119 0.25 -0.5 207,435 - BACOVA_03119 0.25 +2.0 207,522 + BACOVA_03119 0.32 +0.4 207,522 + BACOVA_03119 0.32 -1.3 207,526 + BACOVA_03119 0.32 +1.2 207,526 + BACOVA_03119 0.32 -0.2 207,527 - BACOVA_03119 0.32 -0.1 207,596 - BACOVA_03119 0.37 +0.4 207,625 - BACOVA_03119 0.39 +0.6 207,741 - BACOVA_03119 0.47 -2.6 207,768 + BACOVA_03119 0.49 -1.0 207,769 - BACOVA_03119 0.49 -0.4 207,896 + BACOVA_03119 0.59 +0.2
Or see this region's nucleotide sequence