Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_02586

Experiment: D-Galactose 10 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_02585 and BACOVA_02586 are separated by 28 nucleotidesBACOVA_02586 and BACOVA_02587 are separated by 27 nucleotides BACOVA_02585: BACOVA_02585 - efflux ABC transporter, permease protein, at 352,256 to 354,652 _02585 BACOVA_02586: BACOVA_02586 - putative bacteriocin export ABC transporter, lactococcin 972 group, at 354,681 to 355,355 _02586 BACOVA_02587: BACOVA_02587 - efflux ABC transporter, permease protein, at 355,383 to 357,704 _02587 Position (kb) 354 355 356Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 353.782 kb on + strand, within BACOVA_02585at 353.784 kb on + strand, within BACOVA_02585at 353.784 kb on + strand, within BACOVA_02585at 353.785 kb on - strand, within BACOVA_02585at 353.785 kb on - strand, within BACOVA_02585at 353.789 kb on + strand, within BACOVA_02585at 353.789 kb on + strand, within BACOVA_02585at 353.790 kb on - strand, within BACOVA_02585at 353.790 kb on - strand, within BACOVA_02585at 353.803 kb on - strand, within BACOVA_02585at 353.817 kb on + strand, within BACOVA_02585at 353.858 kb on - strand, within BACOVA_02585at 353.858 kb on - strand, within BACOVA_02585at 353.863 kb on - strand, within BACOVA_02585at 353.863 kb on - strand, within BACOVA_02585at 353.981 kb on + strand, within BACOVA_02585at 353.984 kb on - strand, within BACOVA_02585at 353.984 kb on - strand, within BACOVA_02585at 354.060 kb on + strand, within BACOVA_02585at 354.060 kb on + strand, within BACOVA_02585at 354.061 kb on - strand, within BACOVA_02585at 354.061 kb on - strand, within BACOVA_02585at 354.061 kb on - strand, within BACOVA_02585at 354.110 kb on + strand, within BACOVA_02585at 354.114 kb on + strand, within BACOVA_02585at 354.206 kb on - strand, within BACOVA_02585at 354.219 kb on + strand, within BACOVA_02585at 354.242 kb on + strand, within BACOVA_02585at 354.242 kb on + strand, within BACOVA_02585at 354.264 kb on - strand, within BACOVA_02585at 354.266 kb on - strand, within BACOVA_02585at 354.330 kb on - strand, within BACOVA_02585at 354.402 kb on + strand, within BACOVA_02585at 354.513 kb on - strandat 354.513 kb on - strandat 354.574 kb on - strandat 354.574 kb on - strandat 354.592 kb on + strandat 354.599 kb on - strandat 354.637 kb on - strandat 354.674 kb on + strandat 354.680 kb on + strandat 354.687 kb on - strandat 354.687 kb on - strandat 354.912 kb on - strand, within BACOVA_02586at 355.008 kb on + strand, within BACOVA_02586at 355.011 kb on - strand, within BACOVA_02586at 355.017 kb on - strand, within BACOVA_02586at 355.055 kb on + strand, within BACOVA_02586at 355.055 kb on + strand, within BACOVA_02586at 355.346 kb on + strandat 355.349 kb on + strandat 355.365 kb on - strandat 355.379 kb on + strandat 355.423 kb on + strandat 355.423 kb on + strandat 355.424 kb on - strandat 355.428 kb on + strandat 355.448 kb on + strandat 355.449 kb on - strandat 355.449 kb on - strandat 355.449 kb on - strandat 355.451 kb on + strandat 355.452 kb on - strandat 355.495 kb on + strandat 355.522 kb on - strandat 355.555 kb on - strandat 355.601 kb on + strandat 355.627 kb on - strand, within BACOVA_02587at 355.660 kb on + strand, within BACOVA_02587at 355.739 kb on - strand, within BACOVA_02587at 355.739 kb on - strand, within BACOVA_02587at 355.774 kb on + strand, within BACOVA_02587at 355.821 kb on - strand, within BACOVA_02587at 355.871 kb on + strand, within BACOVA_02587at 355.895 kb on + strand, within BACOVA_02587at 355.924 kb on + strand, within BACOVA_02587at 355.925 kb on - strand, within BACOVA_02587at 355.961 kb on + strand, within BACOVA_02587at 355.961 kb on + strand, within BACOVA_02587at 355.963 kb on + strand, within BACOVA_02587at 355.963 kb on + strand, within BACOVA_02587at 355.964 kb on - strand, within BACOVA_02587at 355.964 kb on - strand, within BACOVA_02587at 355.983 kb on - strand, within BACOVA_02587at 355.983 kb on - strand, within BACOVA_02587at 356.027 kb on + strand, within BACOVA_02587at 356.045 kb on + strand, within BACOVA_02587at 356.046 kb on - strand, within BACOVA_02587at 356.048 kb on - strand, within BACOVA_02587at 356.048 kb on - strand, within BACOVA_02587at 356.048 kb on - strand, within BACOVA_02587at 356.099 kb on + strand, within BACOVA_02587at 356.100 kb on - strand, within BACOVA_02587at 356.187 kb on - strand, within BACOVA_02587at 356.205 kb on - strand, within BACOVA_02587at 356.205 kb on - strand, within BACOVA_02587at 356.205 kb on - strand, within BACOVA_02587at 356.233 kb on + strand, within BACOVA_02587at 356.246 kb on - strand, within BACOVA_02587at 356.343 kb on - strand, within BACOVA_02587

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Galactose 10 mM (C)
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353,782 + BACOVA_02585 0.64 +1.5
353,784 + BACOVA_02585 0.64 +1.4
353,784 + BACOVA_02585 0.64 -0.4
353,785 - BACOVA_02585 0.64 -2.4
353,785 - BACOVA_02585 0.64 -0.6
353,789 + BACOVA_02585 0.64 -0.1
353,789 + BACOVA_02585 0.64 +0.4
353,790 - BACOVA_02585 0.64 +1.8
353,790 - BACOVA_02585 0.64 -0.1
353,803 - BACOVA_02585 0.65 -1.8
353,817 + BACOVA_02585 0.65 -0.2
353,858 - BACOVA_02585 0.67 -0.2
353,858 - BACOVA_02585 0.67 +0.5
353,863 - BACOVA_02585 0.67 -2.0
353,863 - BACOVA_02585 0.67 -0.5
353,981 + BACOVA_02585 0.72 +0.8
353,984 - BACOVA_02585 0.72 +0.0
353,984 - BACOVA_02585 0.72 -1.6
354,060 + BACOVA_02585 0.75 -1.8
354,060 + BACOVA_02585 0.75 -4.2
354,061 - BACOVA_02585 0.75 -1.2
354,061 - BACOVA_02585 0.75 +0.8
354,061 - BACOVA_02585 0.75 -0.6
354,110 + BACOVA_02585 0.77 -0.2
354,114 + BACOVA_02585 0.78 -0.2
354,206 - BACOVA_02585 0.81 +0.4
354,219 + BACOVA_02585 0.82 +0.4
354,242 + BACOVA_02585 0.83 +1.0
354,242 + BACOVA_02585 0.83 +0.4
354,264 - BACOVA_02585 0.84 +0.1
354,266 - BACOVA_02585 0.84 +0.6
354,330 - BACOVA_02585 0.87 -1.6
354,402 + BACOVA_02585 0.90 +1.3
354,513 - -1.2
354,513 - +0.2
354,574 - -0.3
354,574 - -0.2
354,592 + +0.8
354,599 - -0.6
354,637 - -0.2
354,674 + -0.8
354,680 + -2.0
354,687 - -0.8
354,687 - +0.6
354,912 - BACOVA_02586 0.34 +0.8
355,008 + BACOVA_02586 0.48 +2.4
355,011 - BACOVA_02586 0.49 +1.1
355,017 - BACOVA_02586 0.50 -1.3
355,055 + BACOVA_02586 0.55 +0.3
355,055 + BACOVA_02586 0.55 +2.4
355,346 + +0.2
355,349 + +1.8
355,365 - -0.1
355,379 + -1.8
355,423 + +1.5
355,423 + +1.2
355,424 - +0.3
355,428 + +0.4
355,448 + +1.6
355,449 - -0.2
355,449 - -0.2
355,449 - -0.7
355,451 + -0.4
355,452 - -1.2
355,495 + +0.2
355,522 - +0.1
355,555 - -0.8
355,601 + -0.7
355,627 - BACOVA_02587 0.11 +2.0
355,660 + BACOVA_02587 0.12 +2.4
355,739 - BACOVA_02587 0.15 +0.4
355,739 - BACOVA_02587 0.15 +0.2
355,774 + BACOVA_02587 0.17 -0.4
355,821 - BACOVA_02587 0.19 -1.4
355,871 + BACOVA_02587 0.21 -0.6
355,895 + BACOVA_02587 0.22 -0.5
355,924 + BACOVA_02587 0.23 -0.2
355,925 - BACOVA_02587 0.23 +2.6
355,961 + BACOVA_02587 0.25 +0.0
355,961 + BACOVA_02587 0.25 -0.8
355,963 + BACOVA_02587 0.25 -0.2
355,963 + BACOVA_02587 0.25 +0.2
355,964 - BACOVA_02587 0.25 -0.6
355,964 - BACOVA_02587 0.25 -0.0
355,983 - BACOVA_02587 0.26 +0.9
355,983 - BACOVA_02587 0.26 -2.4
356,027 + BACOVA_02587 0.28 +0.2
356,045 + BACOVA_02587 0.29 -0.1
356,046 - BACOVA_02587 0.29 +0.2
356,048 - BACOVA_02587 0.29 -0.0
356,048 - BACOVA_02587 0.29 -0.2
356,048 - BACOVA_02587 0.29 -0.8
356,099 + BACOVA_02587 0.31 -0.4
356,100 - BACOVA_02587 0.31 -0.6
356,187 - BACOVA_02587 0.35 -0.1
356,205 - BACOVA_02587 0.35 -0.0
356,205 - BACOVA_02587 0.35 +0.5
356,205 - BACOVA_02587 0.35 -1.2
356,233 + BACOVA_02587 0.37 +0.2
356,246 - BACOVA_02587 0.37 -1.8
356,343 - BACOVA_02587 0.41 -0.1

Or see this region's nucleotide sequence