Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_02459

Experiment: D-Galactose 10 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_02458 and BACOVA_02459 overlap by 22 nucleotidesBACOVA_02459 and BACOVA_02460 overlap by 4 nucleotides BACOVA_02458: BACOVA_02458 - polysaccharide biosynthesis protein, at 219,829 to 221,364 _02458 BACOVA_02459: BACOVA_02459 - acyltransferase, at 221,343 to 222,335 _02459 BACOVA_02460: BACOVA_02460 - 4Fe-4S binding domain protein, at 222,332 to 223,480 _02460 Position (kb) 221 222 223Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 220.350 kb on + strand, within BACOVA_02458at 220.351 kb on - strand, within BACOVA_02458at 220.354 kb on - strand, within BACOVA_02458at 220.374 kb on - strand, within BACOVA_02458at 220.380 kb on + strand, within BACOVA_02458at 220.422 kb on - strand, within BACOVA_02458at 220.422 kb on - strand, within BACOVA_02458at 220.441 kb on - strand, within BACOVA_02458at 220.441 kb on - strand, within BACOVA_02458at 220.445 kb on - strand, within BACOVA_02458at 220.454 kb on - strand, within BACOVA_02458at 220.620 kb on - strand, within BACOVA_02458at 220.642 kb on - strand, within BACOVA_02458at 220.642 kb on - strand, within BACOVA_02458at 220.642 kb on - strand, within BACOVA_02458at 220.695 kb on - strand, within BACOVA_02458at 220.781 kb on - strand, within BACOVA_02458at 220.782 kb on + strand, within BACOVA_02458at 220.783 kb on - strand, within BACOVA_02458at 220.826 kb on - strand, within BACOVA_02458at 220.828 kb on - strand, within BACOVA_02458at 220.839 kb on - strand, within BACOVA_02458at 220.929 kb on + strand, within BACOVA_02458at 220.951 kb on - strand, within BACOVA_02458at 221.007 kb on - strand, within BACOVA_02458at 221.007 kb on - strand, within BACOVA_02458at 221.007 kb on - strand, within BACOVA_02458at 221.007 kb on - strand, within BACOVA_02458at 221.011 kb on + strand, within BACOVA_02458at 221.012 kb on - strand, within BACOVA_02458at 221.012 kb on - strand, within BACOVA_02458at 221.014 kb on - strand, within BACOVA_02458at 221.049 kb on - strand, within BACOVA_02458at 221.064 kb on - strand, within BACOVA_02458at 221.068 kb on - strand, within BACOVA_02458at 221.099 kb on - strand, within BACOVA_02458at 221.099 kb on - strand, within BACOVA_02458at 221.193 kb on - strand, within BACOVA_02458at 221.241 kb on - strandat 221.253 kb on - strandat 221.266 kb on - strandat 221.372 kb on + strandat 221.372 kb on + strandat 221.383 kb on + strandat 221.388 kb on - strandat 221.399 kb on + strandat 221.420 kb on - strandat 221.440 kb on + strandat 221.441 kb on - strandat 221.442 kb on + strandat 221.442 kb on + strandat 221.443 kb on - strand, within BACOVA_02459at 221.443 kb on - strand, within BACOVA_02459at 221.449 kb on + strand, within BACOVA_02459at 221.505 kb on + strand, within BACOVA_02459at 221.530 kb on + strand, within BACOVA_02459at 221.531 kb on - strand, within BACOVA_02459at 221.546 kb on - strand, within BACOVA_02459at 221.556 kb on - strand, within BACOVA_02459at 221.589 kb on - strand, within BACOVA_02459at 221.589 kb on - strand, within BACOVA_02459at 221.609 kb on + strand, within BACOVA_02459at 221.610 kb on - strand, within BACOVA_02459at 221.610 kb on - strand, within BACOVA_02459at 221.626 kb on + strand, within BACOVA_02459at 221.627 kb on - strand, within BACOVA_02459at 221.627 kb on - strand, within BACOVA_02459at 221.644 kb on - strand, within BACOVA_02459at 221.644 kb on - strand, within BACOVA_02459at 221.644 kb on - strand, within BACOVA_02459at 221.644 kb on - strand, within BACOVA_02459at 221.685 kb on - strand, within BACOVA_02459at 221.715 kb on + strand, within BACOVA_02459at 221.731 kb on + strand, within BACOVA_02459at 221.731 kb on + strand, within BACOVA_02459at 221.740 kb on + strand, within BACOVA_02459at 221.759 kb on - strand, within BACOVA_02459at 221.767 kb on - strand, within BACOVA_02459at 222.814 kb on + strand, within BACOVA_02460at 222.850 kb on - strand, within BACOVA_02460at 222.850 kb on - strand, within BACOVA_02460at 223.039 kb on + strand, within BACOVA_02460at 223.039 kb on + strand, within BACOVA_02460at 223.039 kb on + strand, within BACOVA_02460at 223.040 kb on - strand, within BACOVA_02460at 223.040 kb on - strand, within BACOVA_02460at 223.046 kb on - strand, within BACOVA_02460at 223.051 kb on + strand, within BACOVA_02460at 223.052 kb on - strand, within BACOVA_02460at 223.059 kb on + strand, within BACOVA_02460at 223.065 kb on + strand, within BACOVA_02460at 223.065 kb on + strand, within BACOVA_02460at 223.070 kb on + strand, within BACOVA_02460at 223.118 kb on - strand, within BACOVA_02460at 223.121 kb on + strand, within BACOVA_02460at 223.191 kb on - strand, within BACOVA_02460at 223.226 kb on - strand, within BACOVA_02460at 223.226 kb on - strand, within BACOVA_02460at 223.271 kb on + strand, within BACOVA_02460at 223.282 kb on + strand, within BACOVA_02460at 223.294 kb on - strand, within BACOVA_02460at 223.294 kb on - strand, within BACOVA_02460at 223.294 kb on - strand, within BACOVA_02460

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Galactose 10 mM (C)
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220,350 + BACOVA_02458 0.34 -0.4
220,351 - BACOVA_02458 0.34 +0.3
220,354 - BACOVA_02458 0.34 +2.0
220,374 - BACOVA_02458 0.35 +2.1
220,380 + BACOVA_02458 0.36 +0.5
220,422 - BACOVA_02458 0.39 +2.3
220,422 - BACOVA_02458 0.39 +1.3
220,441 - BACOVA_02458 0.40 +0.3
220,441 - BACOVA_02458 0.40 -1.2
220,445 - BACOVA_02458 0.40 +0.5
220,454 - BACOVA_02458 0.41 +1.0
220,620 - BACOVA_02458 0.51 +1.7
220,642 - BACOVA_02458 0.53 +0.3
220,642 - BACOVA_02458 0.53 -0.5
220,642 - BACOVA_02458 0.53 +1.3
220,695 - BACOVA_02458 0.56 +2.5
220,781 - BACOVA_02458 0.62 +0.4
220,782 + BACOVA_02458 0.62 +0.4
220,783 - BACOVA_02458 0.62 +0.2
220,826 - BACOVA_02458 0.65 +0.8
220,828 - BACOVA_02458 0.65 -0.8
220,839 - BACOVA_02458 0.66 +2.1
220,929 + BACOVA_02458 0.72 +1.5
220,951 - BACOVA_02458 0.73 -0.5
221,007 - BACOVA_02458 0.77 +1.8
221,007 - BACOVA_02458 0.77 +1.5
221,007 - BACOVA_02458 0.77 +2.0
221,007 - BACOVA_02458 0.77 +2.6
221,011 + BACOVA_02458 0.77 -1.8
221,012 - BACOVA_02458 0.77 -0.4
221,012 - BACOVA_02458 0.77 +3.0
221,014 - BACOVA_02458 0.77 +1.2
221,049 - BACOVA_02458 0.79 +1.9
221,064 - BACOVA_02458 0.80 +3.1
221,068 - BACOVA_02458 0.81 +0.9
221,099 - BACOVA_02458 0.83 +2.2
221,099 - BACOVA_02458 0.83 -1.4
221,193 - BACOVA_02458 0.89 -0.5
221,241 - -1.2
221,253 - +3.0
221,266 - +1.4
221,372 + -2.0
221,372 + -0.2
221,383 + +1.8
221,388 - +0.2
221,399 + -0.2
221,420 - +1.7
221,440 + +1.3
221,441 - +0.8
221,442 + +2.4
221,442 + +0.6
221,443 - BACOVA_02459 0.10 +0.7
221,443 - BACOVA_02459 0.10 +0.2
221,449 + BACOVA_02459 0.11 -1.5
221,505 + BACOVA_02459 0.16 -1.2
221,530 + BACOVA_02459 0.19 -1.2
221,531 - BACOVA_02459 0.19 -1.4
221,546 - BACOVA_02459 0.20 -2.2
221,556 - BACOVA_02459 0.21 -0.8
221,589 - BACOVA_02459 0.25 -0.0
221,589 - BACOVA_02459 0.25 +1.8
221,609 + BACOVA_02459 0.27 +0.5
221,610 - BACOVA_02459 0.27 +2.8
221,610 - BACOVA_02459 0.27 +2.6
221,626 + BACOVA_02459 0.28 -2.6
221,627 - BACOVA_02459 0.29 +0.4
221,627 - BACOVA_02459 0.29 +1.4
221,644 - BACOVA_02459 0.30 +2.2
221,644 - BACOVA_02459 0.30 +0.5
221,644 - BACOVA_02459 0.30 +2.0
221,644 - BACOVA_02459 0.30 +2.4
221,685 - BACOVA_02459 0.34 +2.4
221,715 + BACOVA_02459 0.37 -0.2
221,731 + BACOVA_02459 0.39 +0.8
221,731 + BACOVA_02459 0.39 +0.2
221,740 + BACOVA_02459 0.40 -1.8
221,759 - BACOVA_02459 0.42 -0.9
221,767 - BACOVA_02459 0.43 +1.8
222,814 + BACOVA_02460 0.42 +0.7
222,850 - BACOVA_02460 0.45 +3.4
222,850 - BACOVA_02460 0.45 +0.6
223,039 + BACOVA_02460 0.62 -1.9
223,039 + BACOVA_02460 0.62 -1.5
223,039 + BACOVA_02460 0.62 +2.8
223,040 - BACOVA_02460 0.62 +2.1
223,040 - BACOVA_02460 0.62 +3.3
223,046 - BACOVA_02460 0.62 +2.3
223,051 + BACOVA_02460 0.63 -0.2
223,052 - BACOVA_02460 0.63 +4.6
223,059 + BACOVA_02460 0.63 +2.8
223,065 + BACOVA_02460 0.64 +0.7
223,065 + BACOVA_02460 0.64 +1.7
223,070 + BACOVA_02460 0.64 -2.3
223,118 - BACOVA_02460 0.68 +1.1
223,121 + BACOVA_02460 0.69 -1.2
223,191 - BACOVA_02460 0.75 +1.1
223,226 - BACOVA_02460 0.78 -0.4
223,226 - BACOVA_02460 0.78 -1.0
223,271 + BACOVA_02460 0.82 -0.6
223,282 + BACOVA_02460 0.83 +0.8
223,294 - BACOVA_02460 0.84 +1.2
223,294 - BACOVA_02460 0.84 +1.3
223,294 - BACOVA_02460 0.84 +2.0

Or see this region's nucleotide sequence