Experiment: D-Galactose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_02453 and BACOVA_02454 are separated by 228 nucleotides BACOVA_02454 and BACOVA_02455 are separated by 131 nucleotides BACOVA_02455 and BACOVA_02456 are separated by 162 nucleotides BACOVA_02456 and BACOVA_02457 are separated by 51 nucleotides
BACOVA_02453: BACOVA_02453 - hypothetical protein, at 216,750 to 217,094
_02453
BACOVA_02454: BACOVA_02454 - hypothetical protein, at 217,323 to 217,733
_02454
BACOVA_02455: BACOVA_02455 - site-specific recombinase, phage integrase family, at 217,865 to 218,818
_02455
BACOVA_02456: BACOVA_02456 - hypothetical protein, at 218,981 to 219,121
_02456
BACOVA_02457: BACOVA_02457 - transcription termination/antitermination factor NusG, at 219,173 to 219,748
_02457
Position (kb) 217
218
219 Strain fitness (log2 ratio) -2
-1
0
1
2 at 216.943 kb on - strand, within BACOVA_02453 at 217.034 kb on + strand, within BACOVA_02453 at 217.051 kb on - strand, within BACOVA_02453 at 217.051 kb on - strand, within BACOVA_02453 at 217.166 kb on + strand at 217.167 kb on - strand at 217.199 kb on + strand at 217.218 kb on + strand at 217.288 kb on + strand at 217.324 kb on + strand at 217.324 kb on + strand at 217.425 kb on + strand, within BACOVA_02454 at 217.425 kb on + strand, within BACOVA_02454 at 217.425 kb on + strand, within BACOVA_02454 at 217.426 kb on - strand, within BACOVA_02454 at 217.426 kb on - strand, within BACOVA_02454 at 217.427 kb on + strand, within BACOVA_02454 at 217.472 kb on - strand, within BACOVA_02454 at 217.489 kb on + strand, within BACOVA_02454 at 217.493 kb on + strand, within BACOVA_02454 at 217.493 kb on + strand, within BACOVA_02454 at 217.494 kb on - strand, within BACOVA_02454 at 217.526 kb on + strand, within BACOVA_02454 at 217.527 kb on - strand, within BACOVA_02454 at 217.560 kb on + strand, within BACOVA_02454 at 217.560 kb on + strand, within BACOVA_02454 at 217.564 kb on + strand, within BACOVA_02454 at 217.565 kb on - strand, within BACOVA_02454 at 217.565 kb on - strand, within BACOVA_02454 at 217.577 kb on - strand, within BACOVA_02454 at 217.602 kb on + strand, within BACOVA_02454 at 217.703 kb on + strand at 217.768 kb on + strand at 217.780 kb on + strand at 217.780 kb on + strand at 219.597 kb on + strand, within BACOVA_02457 at 219.630 kb on + strand, within BACOVA_02457 at 219.644 kb on - strand, within BACOVA_02457 at 219.644 kb on - strand, within BACOVA_02457 at 219.648 kb on + strand, within BACOVA_02457 at 219.648 kb on + strand, within BACOVA_02457 at 219.648 kb on + strand, within BACOVA_02457 at 219.655 kb on + strand, within BACOVA_02457 at 219.662 kb on - strand, within BACOVA_02457 at 219.683 kb on - strand, within BACOVA_02457 at 219.719 kb on + strand at 219.768 kb on + strand at 219.768 kb on + strand at 219.769 kb on - strand at 219.776 kb on - strand at 219.776 kb on - strand at 219.776 kb on - strand at 219.803 kb on - strand at 219.807 kb on + strand at 219.807 kb on + strand at 219.808 kb on - strand at 219.808 kb on - strand at 219.814 kb on - strand at 219.814 kb on - strand at 219.815 kb on + strand at 219.816 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose 10 mM (C) remove 216,943 - BACOVA_02453 0.56 -1.0 217,034 + BACOVA_02453 0.82 -1.2 217,051 - BACOVA_02453 0.87 -1.8 217,051 - BACOVA_02453 0.87 -1.4 217,166 + -0.7 217,167 - -1.2 217,199 + +0.1 217,218 + -1.9 217,288 + -0.3 217,324 + -0.5 217,324 + +1.1 217,425 + BACOVA_02454 0.25 -0.8 217,425 + BACOVA_02454 0.25 -1.2 217,425 + BACOVA_02454 0.25 -0.6 217,426 - BACOVA_02454 0.25 +0.8 217,426 - BACOVA_02454 0.25 -0.3 217,427 + BACOVA_02454 0.25 -0.5 217,472 - BACOVA_02454 0.36 +0.6 217,489 + BACOVA_02454 0.40 -0.4 217,493 + BACOVA_02454 0.41 +0.4 217,493 + BACOVA_02454 0.41 -0.2 217,494 - BACOVA_02454 0.42 +1.8 217,526 + BACOVA_02454 0.49 -0.7 217,527 - BACOVA_02454 0.50 -0.8 217,560 + BACOVA_02454 0.58 -0.4 217,560 + BACOVA_02454 0.58 -0.3 217,564 + BACOVA_02454 0.59 -1.5 217,565 - BACOVA_02454 0.59 -0.2 217,565 - BACOVA_02454 0.59 +0.8 217,577 - BACOVA_02454 0.62 +0.0 217,602 + BACOVA_02454 0.68 -0.5 217,703 + +0.1 217,768 + +2.1 217,780 + +0.2 217,780 + +0.8 219,597 + BACOVA_02457 0.74 -0.6 219,630 + BACOVA_02457 0.79 +0.2 219,644 - BACOVA_02457 0.82 +0.8 219,644 - BACOVA_02457 0.82 -2.2 219,648 + BACOVA_02457 0.82 -1.4 219,648 + BACOVA_02457 0.82 -1.2 219,648 + BACOVA_02457 0.82 +1.4 219,655 + BACOVA_02457 0.84 -2.0 219,662 - BACOVA_02457 0.85 -0.3 219,683 - BACOVA_02457 0.89 +0.4 219,719 + -1.2 219,768 + -0.6 219,768 + +1.8 219,769 - +2.2 219,776 - +1.5 219,776 - -0.3 219,776 - +1.6 219,803 - +0.0 219,807 + +0.6 219,807 + +0.2 219,808 - +2.3 219,808 - +0.8 219,814 - +1.1 219,814 - +1.0 219,815 + +0.5 219,816 - +1.0
Or see this region's nucleotide sequence